Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:46:00 (77760): wrapper (7.7.26015): starting
11:46:00 (77760): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:46:00] Arguments: --nthreads 8
[2025-07-25 11:46:00] Threads: 8
[2025-07-25 11:46:00] Checking for CVMFS
[2025-07-25 11:46:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:46:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:46:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:46:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:46:01] 2.13.0.0 1483043 15698 326864 148746 1 405 24484356 40960001 19150 16776704 0 71316139 99.658 86285112 19423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 11:46:01] CVMFS is ok
[2025-07-25 11:46:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:46:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:46:01] Further information can be found at the LHC@home message board.
[2025-07-25 11:46:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:46:01] Checking for apptainer binary...
[2025-07-25 11:46:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:46:01] Running /usr/bin/apptainer --version
[2025-07-25 11:46:01] apptainer version 1.4.1-1.el9
[2025-07-25 11:46:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:46:01] c7-4-30.aglt2.org
[2025-07-25 11:46:01] apptainer works
[2025-07-25 11:46:01] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:46:01] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:46:01] Starting ATLAS job with PandaID=6744975803
[2025-07-25 11:46:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 13:57:51]  *** The last 200 lines of the pilot log: ***
[2025-07-25 13:57:51] 2025-07-25 17:57:31,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 13:57:51] 2025-07-25 17:57:31,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 13:57:51] 2025-07-25 17:57:31,336 | INFO     | fitting pss+swap vs Time
[2025-07-25 13:57:51] 2025-07-25 17:57:31,336 | INFO     | sum of square deviations: 665591256.8062029
[2025-07-25 13:57:51] 2025-07-25 17:57:31,337 | INFO     | sum of deviations: -15769415116.310076
[2025-07-25 13:57:51] 2025-07-25 17:57:31,337 | INFO     | mean x: 1753462327.0387597
[2025-07-25 13:57:51] 2025-07-25 17:57:31,337 | INFO     | mean y: 2210025.0620155036
[2025-07-25 13:57:51] 2025-07-25 17:57:31,337 | INFO     | -- intersect: 41545837654.077415
[2025-07-25 13:57:51] 2025-07-25 17:57:31,337 | INFO     | intersect: 41545837654.077415
[2025-07-25 13:57:51] 2025-07-25 17:57:31,337 | INFO     | chi2: 2.3555314405970367
[2025-07-25 13:57:51] 2025-07-25 17:57:31,337 | INFO     | sum of square deviations: 591154176.7983859
[2025-07-25 13:57:51] 2025-07-25 17:57:31,338 | INFO     | sum of deviations: -8355874620.491934
[2025-07-25 13:57:51] 2025-07-25 17:57:31,338 | INFO     | mean x: 1753462174.5403225
[2025-07-25 13:57:51] 2025-07-25 17:57:31,338 | INFO     | mean y: 2224771.7983870967
[2025-07-25 13:57:51] 2025-07-25 17:57:31,338 | INFO     | -- intersect: 24787146636.997467
[2025-07-25 13:57:51] 2025-07-25 17:57:31,338 | INFO     | intersect: 24787146636.997467
[2025-07-25 13:57:51] 2025-07-25 17:57:31,338 | INFO     | chi2: 1.7068709634073544
[2025-07-25 13:57:51] 2025-07-25 17:57:31,339 | INFO     | current chi2=1.7068709634073544 (change=27.537755005523156 %)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,339 | INFO     | sum of square deviations: 522484646.78991646
[2025-07-25 13:57:51] 2025-07-25 17:57:31,339 | INFO     | sum of deviations: -8200787798.899165
[2025-07-25 13:57:51] 2025-07-25 17:57:31,339 | INFO     | mean x: 1753462022.0420167
[2025-07-25 13:57:51] 2025-07-25 17:57:31,339 | INFO     | mean y: 2225120.5798319327
[2025-07-25 13:57:51] 2025-07-25 17:57:31,340 | INFO     | -- intersect: 27524124653.021263
[2025-07-25 13:57:51] 2025-07-25 17:57:31,340 | INFO     | intersect: 27524124653.021263
[2025-07-25 13:57:51] 2025-07-25 17:57:31,340 | INFO     | chi2: 1.6996481526761762
[2025-07-25 13:57:51] 2025-07-25 17:57:31,340 | INFO     | current chi2=1.6996481526761762 (change=0.4231609117516219 %)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,340 | INFO     | right removable region: 118
[2025-07-25 13:57:51] 2025-07-25 17:57:31,340 | INFO     | sum of square deviations: 591151126.7983859
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | sum of deviations: -31096342829.7984
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | mean x: 1753462479.5403225
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | mean y: 2240812.459677419
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | -- intersect: 92239687264.23749
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | intersect: 92239687264.23749
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | chi2: 1.0008348442284234
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | current chi2=1.0008348442284234 (change=57.51129333367122 %)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,341 | INFO     | sum of square deviations: 522478546.78991646
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | sum of deviations: -26467879814.008404
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | mean x: 1753462632.0420167
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | mean y: 2230523.2016806724
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | -- intersect: 88829682843.27583
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | intersect: 88829682843.27583
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | chi2: 0.9952174878159556
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | current chi2=0.9952174878159556 (change=0.5612670706722197 %)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | left removable region: 20
[2025-07-25 13:57:51] 2025-07-25 17:57:31,342 | INFO     | sum of square deviations: 291813174.4591833
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | sum of deviations: -8670890065.204079
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | mean x: 1753462601.5204082
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | mean y: 2218802.102040816
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | -- intersect: 52104326527.045906
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | intersect: 52104326527.045906
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | chi2: 0.2281490164208494
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | -- intersect: 52104326527.045906
[2025-07-25 13:57:51] 2025-07-25 17:57:31,343 | INFO     | current memory leak: -29.71 B/s (using 98 data points, chi2=0.23)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | could have reported an average CPU frequency of 3049 MHz (8 samples)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | ..............................
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | . Timing measurements:
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | . get job = 0 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | . initial setup = 3 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | . payload setup = 12 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | . stage-in = 0 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,344 | INFO     | . payload execution = 7823 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,345 | INFO     | . stage-out = 0 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,345 | INFO     | . log creation = 0 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,345 | INFO     | ..............................
[2025-07-25 13:57:51] 2025-07-25 17:57:31,428 | INFO     | 
[2025-07-25 13:57:51] 2025-07-25 17:57:31,432 | INFO     | job summary report
[2025-07-25 13:57:51] 2025-07-25 17:57:31,433 | INFO     | --------------------------------------------------
[2025-07-25 13:57:51] 2025-07-25 17:57:31,433 | INFO     | PanDA job id: 6744975803
[2025-07-25 13:57:51] 2025-07-25 17:57:31,433 | INFO     | task id: 45743349
[2025-07-25 13:57:51] 2025-07-25 17:57:31,433 | INFO     | errors: (none)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 13:57:51] 2025-07-25 17:57:31,433 | INFO     | pilot state: finished 
[2025-07-25 13:57:51] 2025-07-25 17:57:31,433 | INFO     | transexitcode: 0
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | exeerrorcode: 0
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | exeerrordiag: 
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | exitcode: 0
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | exitmsg: OK
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | cpuconsumptiontime: 36497 s
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | nevents: 400
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | neventsw: 0
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | pid: 89639
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | pgrp: 89639
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | corecount: 8
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | event service: False
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | sizes: {0: 2397302, 1: 2397501, 9: 2397763, 11: 2397791, 7840: 2425648, 7841: 2434646, 7842: 2434830, 7849: 2435024}
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | --------------------------------------------------
[2025-07-25 13:57:51] 2025-07-25 17:57:31,434 | INFO     | 
[2025-07-25 13:57:51] 2025-07-25 17:57:31,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 13:57:51] 2025-07-25 17:57:31,455 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,455 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,455 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 13:57:51] 2025-07-25 17:57:31,457 | INFO     | job 6744975803 has completed (purged errors)
[2025-07-25 13:57:51] 2025-07-25 17:57:31,457 | INFO     | overall cleanup function is called
[2025-07-25 13:57:51] 2025-07-25 17:57:32,464 | INFO     | --- collectZombieJob: --- 10, [89639]
[2025-07-25 13:57:51] 2025-07-25 17:57:32,464 | INFO     | zombie collector waiting for pid 89639
[2025-07-25 13:57:51] 2025-07-25 17:57:32,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 13:57:51] 2025-07-25 17:57:32,465 | INFO     | collected zombie processes
[2025-07-25 13:57:51] 2025-07-25 17:57:32,465 | INFO     | will attempt to kill all subprocesses of pid=89639
[2025-07-25 13:57:51] 2025-07-25 17:57:33,057 | INFO     | PID=83005 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 13:57:51] 2025-07-25 17:57:33,057 | INFO     | .. there are 14 such processes running
[2025-07-25 13:57:51] 2025-07-25 17:57:33,221 | INFO     | process IDs to be killed: [89639] (in reverse order)
[2025-07-25 13:57:51] 2025-07-25 17:57:33,348 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 13:57:51] 2025-07-25 17:57:33,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 13:57:51] 2025-07-25 17:57:33,370 | INFO     | did not find any defunct processes belonging to 89639
[2025-07-25 13:57:51] 2025-07-25 17:57:33,386 | INFO     | did not find any defunct processes belonging to 89639
[2025-07-25 13:57:51] 2025-07-25 17:57:33,386 | INFO     | ready for new job
[2025-07-25 13:57:51] 2025-07-25 17:57:33,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 13:57:51] 2025-07-25 17:57:33,388 | INFO     | ***************************************
[2025-07-25 13:57:51] 2025-07-25 17:57:33,389 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 13:57:51] 2025-07-25 17:57:33,389 | INFO     | ***************************************
[2025-07-25 13:57:51] 2025-07-25 17:57:33,389 | INFO     | 
[2025-07-25 13:57:51] 2025-07-25 17:57:33,407 | INFO     | architecture information:
[2025-07-25 13:57:51] 2025-07-25 17:57:33,408 | INFO     | executing command: cat /etc/os-release
[2025-07-25 13:57:51] 2025-07-25 17:57:33,424 | INFO     | cat /etc/os-release:
[2025-07-25 13:57:51] NAME="CentOS Linux"
[2025-07-25 13:57:51] VERSION="7 (Core)"
[2025-07-25 13:57:51] ID="centos"
[2025-07-25 13:57:51] ID_LIKE="rhel fedora"
[2025-07-25 13:57:51] VERSION_ID="7"
[2025-07-25 13:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 13:57:51] ANSI_COLOR="0;31"
[2025-07-25 13:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 13:57:51] HOME_URL="https://www.centos.org/"
[2025-07-25 13:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 13:57:51] 
[2025-07-25 13:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 13:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 13:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 13:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 13:57:51] 
[2025-07-25 13:57:51] 2025-07-25 17:57:33,424 | INFO     | ***************************************
[2025-07-25 13:57:51] 2025-07-25 17:57:33,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 13:57:51] 2025-07-25 17:57:33,951 | INFO     | sufficient remaining disk space (128929759232 B)
[2025-07-25 13:57:51] 2025-07-25 17:57:33,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 13:57:51] 2025-07-25 17:57:33,952 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 13:57:51] 2025-07-25 17:57:33,952 | INFO     | update_server=False
[2025-07-25 13:57:51] 2025-07-25 17:57:33,952 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 13:57:51] 2025-07-25 17:57:33,952 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 13:57:51] 2025-07-25 17:57:33,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 13:57:51] 2025-07-25 17:57:33,968 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 13:57:51] 2025-07-25 17:57:33,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 13:57:51] 2025-07-25 17:57:33,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 13:57:51] 2025-07-25 17:57:34,151 | INFO     | all job control threads have been joined
[2025-07-25 13:57:51] 2025-07-25 17:57:34,451 | INFO     | all payload control threads have been joined
[2025-07-25 13:57:51] 2025-07-25 17:57:34,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:57:51] 2025-07-25 17:57:34,460 | INFO     | aborting loop
[2025-07-25 13:57:51] 2025-07-25 17:57:34,545 | INFO     | all data control threads have been joined
[2025-07-25 13:57:51] 2025-07-25 17:57:34,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 13:57:51] 2025-07-25 17:57:34,953 | INFO     | [job] retrieve thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,126 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,157 | INFO     | [job] control thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,457 | INFO     | [payload] control thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,466 | INFO     | [job] job monitor thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,551 | INFO     | [data] control thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,635 | INFO     | [data] copytool_in thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,712 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,939 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:35,974 | INFO     | [data] copytool_out thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:36,007 | INFO     | [payload] failed_post thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:36,033 | INFO     | [payload] validate_post thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:36,184 | INFO     | [job] validate thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:36,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:57:51] 2025-07-25 17:57:37,448 | INFO     | [job] queue monitor thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:38,650 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:44,459 | INFO     | job.realtimelogging is not enabled
[2025-07-25 13:57:51] 2025-07-25 17:57:45,465 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 13:57:51] 2025-07-25 17:57:46,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730624243520)>', '<ExcThread(monitor, started 139730268165888)>']
[2025-07-25 13:57:51] 2025-07-25 17:57:47,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 13:57:51] 2025-07-25 17:57:47,033 | INFO     | [monitor] control thread has ended
[2025-07-25 13:57:51] 2025-07-25 17:57:51,158 | INFO     | all workflow threads have been joined
[2025-07-25 13:57:51] 2025-07-25 17:57:51,158 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 13:57:51] 2025-07-25 17:57:51,159 | INFO     | traces error code: 0
[2025-07-25 13:57:51] 2025-07-25 17:57:51,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 13:57:51] 2025-07-25 17:57:51,311 [wrapper] ==== pilot stdout END ====
[2025-07-25 13:57:51] 2025-07-25 17:57:51,344 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 13:57:51] 2025-07-25 17:57:51,349 [wrapper] pilotpid: 83005
[2025-07-25 13:57:51] 2025-07-25 17:57:51,380 [wrapper] Pilot exit status: 0
[2025-07-25 13:57:51] 2025-07-25 17:57:51,415 [wrapper] pandaids: 6744975803
[2025-07-25 13:57:51] 2025-07-25 17:57:51,500 [wrapper] cleanup supervisor_pilot  388313 83006
[2025-07-25 13:57:51] 2025-07-25 17:57:51,503 [wrapper] Test setup, not cleaning
[2025-07-25 13:57:51] 2025-07-25 17:57:51,506 [wrapper] apfmon messages muted
[2025-07-25 13:57:51] 2025-07-25 17:57:51,508 [wrapper] ==== wrapper stdout END ====
[2025-07-25 13:57:51] 2025-07-25 17:57:51,527 [wrapper] ==== wrapper stderr END ====
[2025-07-25 13:57:51]  *** Error codes and diagnostics ***
[2025-07-25 13:57:51]     "exeErrorCode": 0,
[2025-07-25 13:57:51]     "exeErrorDiag": "",
[2025-07-25 13:57:51]     "pilotErrorCode": 0,
[2025-07-25 13:57:51]     "pilotErrorDiag": "",
[2025-07-25 13:57:51]  *** Listing of results directory ***
[2025-07-25 13:57:51] total 436784
[2025-07-25 13:57:51] -rwx------. 1 boincer umatlas     36292 Jul 25 04:18 runpilot2-wrapper.sh
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 04:18 pilot3.tar.gz
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 04:18 queuedata.json
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas       100 Jul 25 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 13:57:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 11:45 run_atlas
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas       105 Jul 25 11:45 job.xml
[2025-07-25 13:57:51] -rw-r--r--. 2 boincer umatlas 228585535 Jul 25 11:46 EVNT.45743347._000957.pool.root.1
[2025-07-25 13:57:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:46 start_atlas.sh
[2025-07-25 13:57:51] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 11:46 shared
[2025-07-25 13:57:51] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 11:46 input.tar.gz
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas         0 Jul 25 11:46 boinc_lockfile
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 11:46 pandaJob.out
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas    979317 Jul 25 11:46 agis_schedconf.cvmfs.json
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas   1593052 Jul 25 11:46 agis_ddmendpoints.agis.ALL.json
[2025-07-25 13:57:51] drwx------. 4 boincer umatlas      4096 Jul 25 11:46 pilot3
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas      6935 Jul 25 13:54 init_data.xml
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas        95 Jul 25 13:56 pilot_heartbeat.json
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas 212711270 Jul 25 13:56 HITS.45743349._018366.pool.root.1
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas       530 Jul 25 13:56 boinc_task_state.xml
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas      1040 Jul 25 13:57 memory_monitor_summary.json
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas    343690 Jul 25 13:57 log.45743349._018366.job.log.tgz.1
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas      7782 Jul 25 13:57 heartbeat.json
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 13:57 boinc_mmap_file
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas        27 Jul 25 13:57 wrapper_checkpoint.txt
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas      4553 Jul 25 13:57 pilotlog.txt
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas    702504 Jul 25 13:57 log.45743349._018366.job.log.1
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas       357 Jul 25 13:57 output.list
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas       620 Jul 25 13:57 runtime_log
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas   1064960 Jul 25 13:57 result.tar.gz
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 13:57 runtime_log.err
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas       652 Jul 25 13:57 oB3NDmYoSz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrhyKDmdfl6Uo.diag
[2025-07-25 13:57:51] -rw-r--r--. 1 boincer umatlas     21006 Jul 25 13:57 stderr.txt
[2025-07-25 13:57:51] HITS file was successfully produced:
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas 212711270 Jul 25 13:56 shared/HITS.pool.root.1
[2025-07-25 13:57:51]  *** Contents of shared directory: ***
[2025-07-25 13:57:51] total 432552
[2025-07-25 13:57:51] -rw-r--r--. 2 boincer umatlas 228585535 Jul 25 11:46 ATLAS.root_0
[2025-07-25 13:57:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 11:46 start_atlas.sh
[2025-07-25 13:57:51] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 11:46 input.tar.gz
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas 212711270 Jul 25 13:56 HITS.pool.root.1
[2025-07-25 13:57:51] -rw-------. 1 boincer umatlas   1064960 Jul 25 13:57 result.tar.gz
13:57:53 (77760): run_atlas exited; CPU time 36736.141013
13:57:53 (77760): called boinc_finish(0)

</stderr_txt>
]]>

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