Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:13:58 (2429881): wrapper (7.7.26015): starting
10:13:58 (2429881): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 10:13:58] Arguments: --nthreads 8
[2025-07-25 10:13:58] Threads: 8
[2025-07-25 10:13:58] Checking for CVMFS
[2025-07-25 10:13:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 10:13:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 10:13:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 10:14:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 10:14:00] 2.12.6.0 2935877 10295 293148 148743 1 65 36425607 40960000 45652 16776704 0 121097721 99.765 77794466 4816 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 10:14:00] CVMFS is ok
[2025-07-25 10:14:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 10:14:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 10:14:00] Further information can be found at the LHC@home message board.
[2025-07-25 10:14:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 10:14:00] Checking for apptainer binary...
[2025-07-25 10:14:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 10:14:00] Running /usr/bin/apptainer --version
[2025-07-25 10:14:00] apptainer version 1.4.1-1.el9
[2025-07-25 10:14:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 10:14:01] c7-2-17.aglt2.org
[2025-07-25 10:14:01] apptainer works
[2025-07-25 10:14:01] Set ATHENA_PROC_NUMBER=8
[2025-07-25 10:14:01] Set ATHENA_CORE_NUMBER=8
[2025-07-25 10:14:01] Starting ATLAS job with PandaID=6741673594
[2025-07-25 10:14:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:40:09]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:40:09] 2025-07-25 16:39:33,938 | INFO     | monitor loop #426: job 0:6741673594 is in state 'finished'
[2025-07-25 12:40:09] 2025-07-25 16:39:33,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 12:40:09] 2025-07-25 16:39:33,966 | INFO     | PID=2441060 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 12:40:09] 2025-07-25 16:39:33,966 | INFO     | .. there are 71 such processes running
[2025-07-25 12:40:09] 2025-07-25 16:39:34,031 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 12:40:09] 2025-07-25 16:39:34,088 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3261.2952916666654
[2025-07-25 12:40:09] 2025-07-25 16:39:34,101 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6741673594/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,103 | INFO     | extracted standard info from prmon json
[2025-07-25 12:40:09] 2025-07-25 16:39:34,103 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:40:09] 2025-07-25 16:39:34,103 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:40:09] 2025-07-25 16:39:34,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:40:09] 2025-07-25 16:39:34,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:40:09] 2025-07-25 16:39:34,106 | INFO     | fitting pss+swap vs Time
[2025-07-25 12:40:09] 2025-07-25 16:39:34,106 | INFO     | sum of square deviations: 832686484.6474824
[2025-07-25 12:40:09] 2025-07-25 16:39:34,137 | INFO     | sum of deviations: -10255206028.964031
[2025-07-25 12:40:09] 2025-07-25 16:39:34,137 | INFO     | mean x: 1753457302.0503597
[2025-07-25 12:40:09] 2025-07-25 16:39:34,137 | INFO     | mean y: 2255404.2805755395
[2025-07-25 12:40:09] 2025-07-25 16:39:34,137 | INFO     | -- intersect: 21597497103.358418
[2025-07-25 12:40:09] 2025-07-25 16:39:34,137 | INFO     | intersect: 21597497103.358418
[2025-07-25 12:40:09] 2025-07-25 16:39:34,138 | INFO     | chi2: 3.964223989861959
[2025-07-25 12:40:09] 2025-07-25 16:39:34,138 | INFO     | sum of square deviations: 746017227.1343291
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | sum of deviations: -1309320386.9104514
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | mean x: 1753457149.5522387
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | mean y: 2270767.7014925373
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | -- intersect: 3079729450.930053
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | intersect: 3079729450.930053
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | chi2: 3.3376010288849804
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | current chi2=3.3376010288849804 (change=15.806951438150163 %)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | right removable region: 133
[2025-07-25 12:40:09] 2025-07-25 16:39:34,139 | INFO     | sum of square deviations: 746012957.1343291
[2025-07-25 12:40:09] 2025-07-25 16:39:34,140 | INFO     | sum of deviations: -41284668108.49252
[2025-07-25 12:40:09] 2025-07-25 16:39:34,162 | INFO     | mean x: 1753457454.5522387
[2025-07-25 12:40:09] 2025-07-25 16:39:34,163 | INFO     | mean y: 2309591.6417910447
[2025-07-25 12:40:09] 2025-07-25 16:39:34,163 | INFO     | -- intersect: 97039376255.50723
[2025-07-25 12:40:09] 2025-07-25 16:39:34,163 | INFO     | intersect: 97039376255.50723
[2025-07-25 12:40:09] 2025-07-25 16:39:34,163 | INFO     | chi2: 1.1893248687758684
[2025-07-25 12:40:09] 2025-07-25 16:39:34,163 | INFO     | current chi2=1.1893248687758684 (change=69.99854519276842 %)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,163 | INFO     | sum of square deviations: 665572104.6201546
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | sum of deviations: -46082270671.83723
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | mean x: 1753457607.0542636
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | mean y: 2318491.976744186
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | -- intersect: 121406607372.11458
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | intersect: 121406607372.11458
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | chi2: 0.9771049412329627
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | current chi2=0.9771049412329627 (change=17.843730768140457 %)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,164 | INFO     | left removable region: 20
[2025-07-25 12:40:09] 2025-07-25 16:39:34,165 | INFO     | sum of square deviations: 447356436.7787608
[2025-07-25 12:40:09] 2025-07-25 16:39:34,165 | INFO     | sum of deviations: -28950662169.92921
[2025-07-25 12:40:09] 2025-07-25 16:39:34,165 | INFO     | mean x: 1753457729.0442479
[2025-07-25 12:40:09] 2025-07-25 16:39:34,165 | INFO     | mean y: 2320977.1858407077
[2025-07-25 12:40:09] 2025-07-25 16:39:34,165 | INFO     | -- intersect: 113477300142.21439
[2025-07-25 12:40:09] 2025-07-25 16:39:34,166 | INFO     | intersect: 113477300142.21439
[2025-07-25 12:40:09] 2025-07-25 16:39:34,166 | INFO     | chi2: 0.2819096177567305
[2025-07-25 12:40:09] 2025-07-25 16:39:34,166 | INFO     | -- intersect: 113477300142.21439
[2025-07-25 12:40:09] 2025-07-25 16:39:34,166 | INFO     | current memory leak: -64.71 B/s (using 113 data points, chi2=0.28)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,166 | INFO     | could have reported an average CPU frequency of 3303 MHz (8 samples)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | ..............................
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . Timing measurements:
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . get job = 0 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . initial setup = 7 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . payload setup = 74 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . stage-in = 0 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . payload execution = 8484 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . stage-out = 2 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | . log creation = 0 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,167 | INFO     | ..............................
[2025-07-25 12:40:09] 2025-07-25 16:39:34,639 | INFO     | 
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | job summary report
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | --------------------------------------------------
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | PanDA job id: 6741673594
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | task id: 45697453
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | errors: (none)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | pilot state: finished 
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | transexitcode: 0
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | exeerrorcode: 0
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | exeerrordiag: 
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | exitcode: 0
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | exitmsg: OK
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | cpuconsumptiontime: 43717 s
[2025-07-25 12:40:09] 2025-07-25 16:39:34,640 | INFO     | nevents: 400
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | neventsw: 0
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | pid: 2465674
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | pgrp: 2465674
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | corecount: 8
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | event service: False
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | sizes: {0: 2397329, 1: 2397385, 2: 2397612, 13: 2397612, 25: 2397668, 36: 2397696, 38: 2398114, 47: 2398142, 8562: 2425718, 8563: 2425717, 8567: 2434771, 8571: 243
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | --------------------------------------------------
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | 
[2025-07-25 12:40:09] 2025-07-25 16:39:34,641 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 12:40:09] 2025-07-25 16:39:34,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:40:09] 2025-07-25 16:39:34,803 | INFO     | job 6741673594 has completed (purged errors)
[2025-07-25 12:40:09] 2025-07-25 16:39:34,803 | INFO     | overall cleanup function is called
[2025-07-25 12:40:09] 2025-07-25 16:39:35,812 | INFO     | --- collectZombieJob: --- 10, [2465674]
[2025-07-25 12:40:09] 2025-07-25 16:39:35,812 | INFO     | zombie collector waiting for pid 2465674
[2025-07-25 12:40:09] 2025-07-25 16:39:35,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:40:09] 2025-07-25 16:39:35,813 | INFO     | collected zombie processes
[2025-07-25 12:40:09] 2025-07-25 16:39:35,813 | INFO     | will attempt to kill all subprocesses of pid=2465674
[2025-07-25 12:40:09] 2025-07-25 16:39:38,717 | INFO     | process IDs to be killed: [2465674] (in reverse order)
[2025-07-25 12:40:09] 2025-07-25 16:39:38,997 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:40:09] 2025-07-25 16:39:38,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:40:09] 2025-07-25 16:39:39,061 | INFO     | did not find any defunct processes belonging to 2465674
[2025-07-25 12:40:09] 2025-07-25 16:39:39,218 | INFO     | did not find any defunct processes belonging to 2465674
[2025-07-25 12:40:09] 2025-07-25 16:39:39,219 | INFO     | ready for new job
[2025-07-25 12:40:09] 2025-07-25 16:39:39,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:40:09] 2025-07-25 16:39:39,220 | INFO     | ***************************************
[2025-07-25 12:40:09] 2025-07-25 16:39:39,220 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:40:09] 2025-07-25 16:39:39,220 | INFO     | ***************************************
[2025-07-25 12:40:09] 2025-07-25 16:39:39,220 | INFO     | 
[2025-07-25 12:40:09] 2025-07-25 16:39:39,248 | INFO     | architecture information:
[2025-07-25 12:40:09] 2025-07-25 16:39:39,252 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:40:09] 2025-07-25 16:39:39,309 | INFO     | cat /etc/os-release:
[2025-07-25 12:40:09] NAME="CentOS Linux"
[2025-07-25 12:40:09] VERSION="7 (Core)"
[2025-07-25 12:40:09] ID="centos"
[2025-07-25 12:40:09] ID_LIKE="rhel fedora"
[2025-07-25 12:40:09] VERSION_ID="7"
[2025-07-25 12:40:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:40:09] ANSI_COLOR="0;31"
[2025-07-25 12:40:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:40:09] HOME_URL="https://www.centos.org/"
[2025-07-25 12:40:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:40:09] 
[2025-07-25 12:40:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:40:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:40:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:40:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:40:09] 
[2025-07-25 12:40:09] 2025-07-25 16:39:39,310 | INFO     | ***************************************
[2025-07-25 12:40:09] 2025-07-25 16:39:39,813 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 12:40:09] 2025-07-25 16:39:39,874 | INFO     | sufficient remaining disk space (128554369024 B)
[2025-07-25 12:40:09] 2025-07-25 16:39:39,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:40:09] 2025-07-25 16:39:39,875 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:40:09] 2025-07-25 16:39:39,875 | INFO     | update_server=False
[2025-07-25 12:40:09] 2025-07-25 16:39:39,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:40:09] 2025-07-25 16:39:39,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:40:09] 2025-07-25 16:39:39,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:40:09] 2025-07-25 16:39:40,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:40:09] 2025-07-25 16:39:40,018 | INFO     | aborting loop
[2025-07-25 12:40:09] 2025-07-25 16:39:40,306 | INFO     | all data control threads have been joined
[2025-07-25 12:40:09] 2025-07-25 16:39:40,461 | INFO     | all job control threads have been joined
[2025-07-25 12:40:09] 2025-07-25 16:39:40,881 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:40,885 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,010 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,024 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,051 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,223 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,230 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,238 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,243 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,296 | INFO     | all payload control threads have been joined
[2025-07-25 12:40:09] 2025-07-25 16:39:41,311 | INFO     | [data] control thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,467 | INFO     | [job] control thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:41,909 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:42,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:40:09] 2025-07-25 16:39:42,259 | INFO     | [job] validate thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:42,302 | INFO     | [payload] control thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:46,217 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:40:09] 2025-07-25 16:39:46,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318429087552)>', '<ExcThread(monitor, started 140317672052480)>']
[2025-07-25 12:40:09] 2025-07-25 16:39:51,563 | INFO     | all workflow threads have been joined
[2025-07-25 12:40:09] 2025-07-25 16:39:51,563 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:40:09] 2025-07-25 16:39:51,564 | INFO     | traces error code: 0
[2025-07-25 12:40:09] 2025-07-25 16:39:51,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:40:09] 2025-07-25 16:40:07,681 | INFO     | PID=2441060 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 12:40:09] 2025-07-25 16:40:07,681 | INFO     | .. there are 71 such processes running
[2025-07-25 12:40:09] 2025-07-25 16:40:07,682 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:40:09] 2025-07-25 16:40:07,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:40:09] 2025-07-25 16:40:07,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:40:09] 2025-07-25 16:40:07,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:40:09] 2025-07-25 16:40:07,682 | INFO     | [monitor] control thread has ended
[2025-07-25 12:40:09] 2025-07-25 16:40:08,196 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:40:09] 2025-07-25 16:40:08,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:40:09] 2025-07-25 16:40:08,281 [wrapper] pilotpid: 2441060
[2025-07-25 12:40:09] 2025-07-25 16:40:08,304 [wrapper] Pilot exit status: 0
[2025-07-25 12:40:09] 2025-07-25 16:40:08,372 [wrapper] pandaids: 6741673594
[2025-07-25 12:40:09] 2025-07-25 16:40:08,810 [wrapper] cleanup supervisor_pilot  478166 2441061
[2025-07-25 12:40:09] 2025-07-25 16:40:08,814 [wrapper] Test setup, not cleaning
[2025-07-25 12:40:09] 2025-07-25 16:40:08,820 [wrapper] apfmon messages muted
[2025-07-25 12:40:09] 2025-07-25 16:40:08,833 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:40:09] 2025-07-25 16:40:08,848 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:40:09]  *** Error codes and diagnostics ***
[2025-07-25 12:40:09]     "exeErrorCode": 0,
[2025-07-25 12:40:09]     "exeErrorDiag": "",
[2025-07-25 12:40:09]     "pilotErrorCode": 0,
[2025-07-25 12:40:09]     "pilotErrorDiag": "",
[2025-07-25 12:40:09]  *** Listing of results directory ***
[2025-07-25 12:40:09] total 566456
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 16:13 pilot3.tar.gz
[2025-07-25 12:40:09] -rwx------. 1 boincer umatlas     36292 Jul 21 16:15 runpilot2-wrapper.sh
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 16:16 queuedata.json
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas       100 Jul 25 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:40:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 10:13 run_atlas
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas       105 Jul 25 10:13 job.xml
[2025-07-25 12:40:09] -rw-r--r--. 2 boincer umatlas 317418174 Jul 25 10:13 EVNT.45697451._000005.pool.root.1
[2025-07-25 12:40:09] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 10:13 shared
[2025-07-25 12:40:09] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 10:13 input.tar.gz
[2025-07-25 12:40:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 10:13 start_atlas.sh
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas         0 Jul 25 10:13 boinc_lockfile
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas      2631 Jul 25 10:14 pandaJob.out
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas    979325 Jul 25 10:15 agis_schedconf.cvmfs.json
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas   1593052 Jul 25 10:15 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:40:09] drwx------. 4 boincer umatlas      4096 Jul 25 10:15 pilot3
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas      6934 Jul 25 12:27 init_data.xml
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas 256911721 Jul 25 12:38 HITS.45697453._000109.pool.root.1
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas       530 Jul 25 12:38 boinc_task_state.xml
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas      1052 Jul 25 12:39 memory_monitor_summary.json
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas        95 Jul 25 12:39 pilot_heartbeat.json
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas    327033 Jul 25 12:39 log.45697453._000109.job.log.tgz.1
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas      7771 Jul 25 12:39 heartbeat.json
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 12:40 boinc_mmap_file
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas        27 Jul 25 12:40 wrapper_checkpoint.txt
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas       823 Jul 25 12:40 pilotlog.txt
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas    600908 Jul 25 12:40 log.45697453._000109.job.log.1
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas       357 Jul 25 12:40 output.list
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas       620 Jul 25 12:40 runtime_log
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas    942080 Jul 25 12:40 result.tar.gz
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 12:40 runtime_log.err
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas       655 Jul 25 12:40 qEdMDmc6By7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiuFLDmWduGXm.diag
[2025-07-25 12:40:09] -rw-r--r--. 1 boincer umatlas     21359 Jul 25 12:40 stderr.txt
[2025-07-25 12:40:09] HITS file was successfully produced:
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas 256911721 Jul 25 12:38 shared/HITS.pool.root.1
[2025-07-25 12:40:09]  *** Contents of shared directory: ***
[2025-07-25 12:40:09] total 562344
[2025-07-25 12:40:09] -rw-r--r--. 2 boincer umatlas 317418174 Jul 25 10:13 ATLAS.root_0
[2025-07-25 12:40:09] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 10:13 input.tar.gz
[2025-07-25 12:40:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 10:13 start_atlas.sh
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas 256911721 Jul 25 12:38 HITS.pool.root.1
[2025-07-25 12:40:09] -rw-------. 1 boincer umatlas    942080 Jul 25 12:40 result.tar.gz
12:40:11 (2429881): run_atlas exited; CPU time 44006.261443
12:40:11 (2429881): called boinc_finish(0)

</stderr_txt>
]]>

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