Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:06:30 (1453862): wrapper (7.7.26015): starting
10:06:30 (1453862): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 10:06:30] Arguments: --nthreads 8
[2025-07-25 10:06:30] Threads: 8
[2025-07-25 10:06:30] Checking for CVMFS
[2025-07-25 10:06:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 10:06:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 10:06:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 10:06:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 10:06:31] 2.13.1.0 3153527 5590 123900 148743 0 188 21590050 40960001 6994 16776704 0 68676630 99.998 206593 57610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 10:06:31] CVMFS is ok
[2025-07-25 10:06:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 10:06:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 10:06:31] Further information can be found at the LHC@home message board.
[2025-07-25 10:06:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 10:06:31] Checking for apptainer binary...
[2025-07-25 10:06:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 10:06:31] Running /usr/bin/apptainer --version
[2025-07-25 10:06:31] apptainer version 1.4.1-1.el9
[2025-07-25 10:06:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 10:06:31] c-208-37.aglt2.org
[2025-07-25 10:06:31] apptainer works
[2025-07-25 10:06:31] Set ATHENA_PROC_NUMBER=8
[2025-07-25 10:06:31] Set ATHENA_CORE_NUMBER=8
[2025-07-25 10:06:31] Starting ATLAS job with PandaID=6744949641
[2025-07-25 10:06:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 11:05:22]  *** The last 200 lines of the pilot log: ***
[2025-07-25 11:05:22]  guid=bfe74c2f-6054-4b03-83e6-9665b1c037c4
[2025-07-25 11:05:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-25 11:05:22]  is_altstaged=None
[2025-07-25 11:05:22]  is_tar=False
[2025-07-25 11:05:22]  lfn=log.45743349._015407.job.log.tgz.1
[2025-07-25 11:05:22]  mtime=0
[2025-07-25 11:05:22]  protocol_id=None
[2025-07-25 11:05:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 11:05:22]  replicas=None
[2025-07-25 11:05:22]  scope=mc23_13p6TeV
[2025-07-25 11:05:22]  status=None
[2025-07-25 11:05:22]  status_code=0
[2025-07-25 11:05:22]  storage_token=
[2025-07-25 11:05:22]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6744949641/log.45743349._015407.job.log.tgz.1
[2025-07-25 11:05:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/e8/log.45743349._015407.job.log.tgz.1
[2025-07-25 11:05:22]  workdir=None
[2025-07-25 11:05:22] ]
[2025-07-25 11:05:22] 2025-07-25 15:04:26,395 | INFO     | transferring file log.45743349._015407.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6744949641/log.45743349._015407.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 11:05:22] 2025-07-25 15:04:26,396 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6744949641/log.45743349._015407.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._015407.job
[2025-07-25 11:05:22] 2025-07-25 15:04:26,410 | INFO     | adding to output.list: log.45743349._015407.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/e8/log.45743349._015407.job.log.tg
[2025-07-25 11:05:22] 2025-07-25 15:04:26,410 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 11:05:22] 2025-07-25 15:04:26,410 | INFO     | summary of transferred files:
[2025-07-25 11:05:22] 2025-07-25 15:04:26,411 | INFO     |  -- lfn=log.45743349._015407.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 11:05:22] 2025-07-25 15:04:26,411 | INFO     | stage-out finished correctly
[2025-07-25 11:05:22] 2025-07-25 15:04:26,458 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 11:05:22] 2025-07-25 15:04:27,458 | INFO     | job 6744949641 has state=finished
[2025-07-25 11:05:22] 2025-07-25 15:04:27,458 | INFO     | preparing for final server update for job 6744949641 in state='finished'
[2025-07-25 11:05:22] 2025-07-25 15:04:27,458 | INFO     | this job has now completed (state=finished)
[2025-07-25 11:05:22] 2025-07-25 15:04:27,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 11:05:22] 2025-07-25 15:04:27,458 | INFO     | log transfer has been attempted: DONE
[2025-07-25 11:05:22] 2025-07-25 15:04:27,459 | INFO     | job 6744949641 has finished - writing final server update
[2025-07-25 11:05:22] 2025-07-25 15:04:27,459 | INFO     | total number of processed events: 400 (read)
[2025-07-25 11:05:22] 2025-07-25 15:04:27,459 | INFO     | executing command: lscpu
[2025-07-25 11:05:22] 2025-07-25 15:04:27,499 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 11:05:22] 2025-07-25 15:04:28,515 | INFO     | monitor loop #249: job 0:6744949641 is in state 'finished'
[2025-07-25 11:05:22] 2025-07-25 15:04:28,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 11:05:22] 2025-07-25 15:04:30,068 | INFO     | 3474s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-25 11:05:22] 2025-07-25 15:04:30,436 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 11:05:22] 2025-07-25 15:04:30,441 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3614.8510624999994
[2025-07-25 11:05:22] 2025-07-25 15:04:30,454 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6744949641/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 11:05:22] 2025-07-25 15:04:30,454 | INFO     | extracted standard info from prmon json
[2025-07-25 11:05:22] 2025-07-25 15:04:30,454 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 11:05:22] 2025-07-25 15:04:30,454 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 11:05:22] 2025-07-25 15:04:30,454 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 11:05:22] 2025-07-25 15:04:30,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | fitting pss+swap vs Time
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | sum of square deviations: 38744912.5
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | sum of deviations: 372019815.5
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | mean x: 1753454217.5
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | mean y: 2511784.1
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | -- intersect: -16833755802.826332
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | intersect: -16833755802.826332
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | chi2: 0.000158806793024189
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | -- intersect: -16833755802.826332
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | current memory leak: 9.60 B/s (using 50 data points, chi2=0.00)
[2025-07-25 11:05:22] 2025-07-25 15:04:30,456 | INFO     | could have reported an average CPU frequency of 3660 MHz (5 samples)
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | ..............................
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . Timing measurements:
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . get job = 0 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . initial setup = 2 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . payload setup = 3 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . stage-in = 0 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . payload execution = 3446 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . stage-out = 0 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | . log creation = 0 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,457 | INFO     | ..............................
[2025-07-25 11:05:22] 2025-07-25 15:04:30,642 | INFO     | 
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | job summary report
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | --------------------------------------------------
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | PanDA job id: 6744949641
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | task id: 45743349
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | errors: (none)
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | pilot state: finished 
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | transexitcode: 0
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | exeerrorcode: 0
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | exeerrordiag: 
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | exitcode: 0
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | exitmsg: OK
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | cpuconsumptiontime: 25814 s
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | nevents: 400
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | neventsw: 0
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | pid: 1477953
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | pgrp: 1477953
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | corecount: 8
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | event service: False
[2025-07-25 11:05:22] 2025-07-25 15:04:30,643 | INFO     | sizes: {0: 2397358, 3: 2397734, 11: 2397762, 3455: 2423525, 3456: 2432579, 3460: 2432749}
[2025-07-25 11:05:22] 2025-07-25 15:04:30,644 | INFO     | --------------------------------------------------
[2025-07-25 11:05:22] 2025-07-25 15:04:30,644 | INFO     | 
[2025-07-25 11:05:22] 2025-07-25 15:04:30,644 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | job 6744949641 has completed (purged errors)
[2025-07-25 11:05:22] 2025-07-25 15:04:30,663 | INFO     | overall cleanup function is called
[2025-07-25 11:05:22] 2025-07-25 15:04:31,671 | INFO     | --- collectZombieJob: --- 10, [1477953]
[2025-07-25 11:05:22] 2025-07-25 15:04:31,671 | INFO     | zombie collector waiting for pid 1477953
[2025-07-25 11:05:22] 2025-07-25 15:04:31,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 11:05:22] 2025-07-25 15:04:31,671 | INFO     | collected zombie processes
[2025-07-25 11:05:22] 2025-07-25 15:04:31,671 | INFO     | will attempt to kill all subprocesses of pid=1477953
[2025-07-25 11:05:22] 2025-07-25 15:04:31,946 | INFO     | process IDs to be killed: [1477953] (in reverse order)
[2025-07-25 11:05:22] 2025-07-25 15:04:32,058 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 11:05:22] 2025-07-25 15:04:32,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 11:05:22] 2025-07-25 15:04:32,072 | INFO     | did not find any defunct processes belonging to 1477953
[2025-07-25 11:05:22] 2025-07-25 15:04:32,083 | INFO     | did not find any defunct processes belonging to 1477953
[2025-07-25 11:05:22] 2025-07-25 15:04:32,083 | INFO     | ready for new job
[2025-07-25 11:05:22] 2025-07-25 15:04:32,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 11:05:22] 2025-07-25 15:04:32,085 | INFO     | ***************************************
[2025-07-25 11:05:22] 2025-07-25 15:04:32,085 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 11:05:22] 2025-07-25 15:04:32,085 | INFO     | ***************************************
[2025-07-25 11:05:22] 2025-07-25 15:04:32,085 | INFO     | 
[2025-07-25 11:05:22] 2025-07-25 15:04:32,090 | INFO     | architecture information:
[2025-07-25 11:05:22] 2025-07-25 15:04:32,090 | INFO     | executing command: cat /etc/os-release
[2025-07-25 11:05:22] 2025-07-25 15:04:32,104 | INFO     | cat /etc/os-release:
[2025-07-25 11:05:22] NAME="CentOS Linux"
[2025-07-25 11:05:22] VERSION="7 (Core)"
[2025-07-25 11:05:22] ID="centos"
[2025-07-25 11:05:22] ID_LIKE="rhel fedora"
[2025-07-25 11:05:22] VERSION_ID="7"
[2025-07-25 11:05:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 11:05:22] ANSI_COLOR="0;31"
[2025-07-25 11:05:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 11:05:22] HOME_URL="https://www.centos.org/"
[2025-07-25 11:05:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 11:05:22] 
[2025-07-25 11:05:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 11:05:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 11:05:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 11:05:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 11:05:22] 
[2025-07-25 11:05:22] 2025-07-25 15:04:32,105 | INFO     | ***************************************
[2025-07-25 11:05:22] 2025-07-25 15:04:32,608 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-25 11:05:22] 2025-07-25 15:04:32,623 | INFO     | sufficient remaining disk space (165120311296 B)
[2025-07-25 11:05:22] 2025-07-25 15:04:32,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 11:05:22] 2025-07-25 15:04:32,623 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 11:05:22] 2025-07-25 15:04:32,623 | INFO     | update_server=False
[2025-07-25 11:05:22] 2025-07-25 15:04:32,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 11:05:22] 2025-07-25 15:04:32,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 11:05:22] 2025-07-25 15:04:32,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 11:05:22] 2025-07-25 15:04:32,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 11:05:22] 2025-07-25 15:04:32,624 | INFO     | aborting loop
[2025-07-25 11:05:22] 2025-07-25 15:04:33,561 | INFO     | all data control threads have been joined
[2025-07-25 11:05:22] 2025-07-25 15:04:33,625 | INFO     | [job] job monitor thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:33,628 | INFO     | [job] retrieve thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:33,871 | INFO     | all payload control threads have been joined
[2025-07-25 11:05:22] 2025-07-25 15:04:34,039 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,200 | INFO     | all job control threads have been joined
[2025-07-25 11:05:22] 2025-07-25 15:04:34,349 | INFO     | [data] copytool_in thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,515 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,537 | INFO     | [job] validate thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,566 | INFO     | [data] control thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,598 | INFO     | [payload] validate_post thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,629 | INFO     | [data] copytool_out thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,731 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:34,876 | INFO     | [payload] control thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:35,029 | INFO     | [payload] failed_post thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:35,205 | INFO     | [job] control thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:35,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 11:05:22] 2025-07-25 15:04:36,532 | INFO     | [job] queue monitor thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:36,630 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 11:05:22] 2025-07-25 15:04:38,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504886114112)>', '<ExcThread(monitor, started 140504394090240)>']
[2025-07-25 11:05:22] 2025-07-25 15:04:43,529 | INFO     | all workflow threads have been joined
[2025-07-25 11:05:22] 2025-07-25 15:04:43,529 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 11:05:22] 2025-07-25 15:04:43,530 | INFO     | traces error code: 0
[2025-07-25 11:05:22] 2025-07-25 15:04:43,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 11:05:22] 2025-07-25 15:05:03,548 | INFO     | PID=1459457 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 11:05:22] 2025-07-25 15:05:03,548 | INFO     | .. there are 15 such processes running
[2025-07-25 11:05:22] 2025-07-25 15:05:03,548 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 11:05:22] 2025-07-25 15:05:03,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 11:05:22] 2025-07-25 15:05:03,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 11:05:22] 2025-07-25 15:05:03,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 11:05:22] 2025-07-25 15:05:03,548 | INFO     | [monitor] control thread has ended
[2025-07-25 11:05:22] 2025-07-25 15:05:03,657 [wrapper] ==== pilot stdout END ====
[2025-07-25 11:05:22] 2025-07-25 15:05:03,658 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 11:05:22] 2025-07-25 15:05:03,660 [wrapper] pilotpid: 1459457
[2025-07-25 11:05:22] 2025-07-25 15:05:03,661 [wrapper] Pilot exit status: 0
[2025-07-25 11:05:22] 2025-07-25 15:05:03,667 [wrapper] pandaids: 6744949641
[2025-07-25 11:05:22] 2025-07-25 15:05:03,722 [wrapper] cleanup supervisor_pilot 1703837 1459458
[2025-07-25 11:05:22] 2025-07-25 15:05:03,723 [wrapper] Test setup, not cleaning
[2025-07-25 11:05:22] 2025-07-25 15:05:03,725 [wrapper] apfmon messages muted
[2025-07-25 11:05:22] 2025-07-25 15:05:03,726 [wrapper] ==== wrapper stdout END ====
[2025-07-25 11:05:22] 2025-07-25 15:05:03,727 [wrapper] ==== wrapper stderr END ====
[2025-07-25 11:05:22]  *** Error codes and diagnostics ***
[2025-07-25 11:05:22]     "exeErrorCode": 0,
[2025-07-25 11:05:22]     "exeErrorDiag": "",
[2025-07-25 11:05:22]     "pilotErrorCode": 0,
[2025-07-25 11:05:22]     "pilotErrorDiag": "",
[2025-07-25 11:05:22]  *** Listing of results directory ***
[2025-07-25 11:05:22] total 438636
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 23:17 pilot3.tar.gz
[2025-07-25 11:05:22] -rwx------. 1 boincer umatlas     36292 Jul 24 23:30 runpilot2-wrapper.sh
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 23:30 queuedata.json
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas       100 Jul 25 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 11:05:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 10:06 run_atlas
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas       105 Jul 25 10:06 job.xml
[2025-07-25 11:05:22] -rw-r--r--. 2 boincer umatlas 231498762 Jul 25 10:06 EVNT.45743347._000855.pool.root.1
[2025-07-25 11:05:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 10:06 start_atlas.sh
[2025-07-25 11:05:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 10:06 shared
[2025-07-25 11:05:22] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 10:06 input.tar.gz
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas         0 Jul 25 10:06 boinc_lockfile
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas      2561 Jul 25 10:06 pandaJob.out
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas    979325 Jul 25 10:06 agis_schedconf.cvmfs.json
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas   1593052 Jul 25 10:06 agis_ddmendpoints.agis.ALL.json
[2025-07-25 11:05:22] drwx------. 4 boincer umatlas      4096 Jul 25 10:06 pilot3
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas      7174 Jul 25 11:00 init_data.xml
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas 212477586 Jul 25 11:04 HITS.45743349._015407.pool.root.1
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas       529 Jul 25 11:04 boinc_task_state.xml
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas      1028 Jul 25 11:04 memory_monitor_summary.json
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas    300513 Jul 25 11:04 log.45743349._015407.job.log.tgz.1
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas      7765 Jul 25 11:04 heartbeat.json
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas        95 Jul 25 11:04 pilot_heartbeat.json
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas       823 Jul 25 11:05 pilotlog.txt
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas    351832 Jul 25 11:05 log.45743349._015407.job.log.1
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas       357 Jul 25 11:05 output.list
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas       620 Jul 25 11:05 runtime_log
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas    675840 Jul 25 11:05 result.tar.gz
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas      8660 Jul 25 11:05 runtime_log.err
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas       651 Jul 25 11:05 4oRLDmmJOz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVOyKDmEaEQCn.diag
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas        27 Jul 25 11:05 wrapper_checkpoint.txt
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 11:05 boinc_mmap_file
[2025-07-25 11:05:22] -rw-r--r--. 1 boincer umatlas     21377 Jul 25 11:05 stderr.txt
[2025-07-25 11:05:22] HITS file was successfully produced:
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas 212477586 Jul 25 11:04 shared/HITS.pool.root.1
[2025-07-25 11:05:22]  *** Contents of shared directory: ***
[2025-07-25 11:05:22] total 434792
[2025-07-25 11:05:22] -rw-r--r--. 2 boincer umatlas 231498762 Jul 25 10:06 ATLAS.root_0
[2025-07-25 11:05:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 10:06 start_atlas.sh
[2025-07-25 11:05:22] -rw-r--r--. 2 boincer umatlas    542892 Jul 25 10:06 input.tar.gz
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas 212477586 Jul 25 11:04 HITS.pool.root.1
[2025-07-25 11:05:22] -rw-------. 1 boincer umatlas    675840 Jul 25 11:05 result.tar.gz
11:05:24 (1453862): run_atlas exited; CPU time 25896.478410
11:05:24 (1453862): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN