Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:24:15 (415364): wrapper (7.7.26015): starting
04:24:15 (415364): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 04:24:15] Arguments: --nthreads 4
[2025-07-26 04:24:15] Threads: 4
[2025-07-26 04:24:15] Checking for CVMFS
[2025-07-26 04:24:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 04:24:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 04:24:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 04:24:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 04:24:15] 2.9.2.0 3247 1339 83676 148761 0 57 19151075 36864001 0 130560 0 1080609 99.992 47811 2612 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 04:24:15] CVMFS is ok
[2025-07-26 04:24:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 04:24:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 04:24:15] Further information can be found at the LHC@home message board.
[2025-07-26 04:24:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 04:24:15] Checking for apptainer binary...
[2025-07-26 04:24:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 04:24:15] Running /usr/bin/apptainer --version
[2025-07-26 04:24:15] apptainer version 1.4.1-1.1
[2025-07-26 04:24:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 04:24:15] thA338
[2025-07-26 04:24:15] apptainer works
[2025-07-26 04:24:15] Set ATHENA_PROC_NUMBER=4
[2025-07-26 04:24:15] Set ATHENA_CORE_NUMBER=4
[2025-07-26 04:24:15] Starting ATLAS job with PandaID=6744950112
[2025-07-26 04:24:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:46:37]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:46:37]  storage_token=
[2025-07-26 05:46:37]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744950112/log.45743349._015689.job.log.tgz.1
[2025-07-26 05:46:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/82/log.45743349._015689.job.log.tgz.1
[2025-07-26 05:46:37]  workdir=None
[2025-07-26 05:46:37] ]
[2025-07-26 05:46:37] 2025-07-26 03:46:00,155 | INFO     | transferring file log.45743349._015689.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744950112/log.45743349._015689.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 05:46:37] 2025-07-26 03:46:00,155 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744950112/log.45743349._015689.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0156
[2025-07-26 05:46:37] 2025-07-26 03:46:00,173 | INFO     | adding to output.list: log.45743349._015689.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/82/log.45743349._015689.job.log.tg
[2025-07-26 05:46:37] 2025-07-26 03:46:00,173 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 05:46:37] 2025-07-26 03:46:00,173 | INFO     | summary of transferred files:
[2025-07-26 05:46:37] 2025-07-26 03:46:00,173 | INFO     |  -- lfn=log.45743349._015689.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 05:46:37] 2025-07-26 03:46:00,173 | INFO     | stage-out finished correctly
[2025-07-26 05:46:37] 2025-07-26 03:46:00,214 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 05:46:37] 2025-07-26 03:46:00,275 | INFO     | job 6744950112 has state=finished
[2025-07-26 05:46:37] 2025-07-26 03:46:00,276 | INFO     | preparing for final server update for job 6744950112 in state='finished'
[2025-07-26 05:46:37] 2025-07-26 03:46:00,276 | INFO     | this job has now completed (state=finished)
[2025-07-26 05:46:37] 2025-07-26 03:46:00,276 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 05:46:37] 2025-07-26 03:46:00,276 | INFO     | log transfer has been attempted: DONE
[2025-07-26 05:46:37] 2025-07-26 03:46:00,276 | INFO     | job 6744950112 has finished - writing final server update
[2025-07-26 05:46:37] 2025-07-26 03:46:00,276 | INFO     | total number of processed events: 400 (read)
[2025-07-26 05:46:37] 2025-07-26 03:46:00,277 | INFO     | executing command: lscpu
[2025-07-26 05:46:37] 2025-07-26 03:46:00,298 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 05:46:37] 2025-07-26 03:46:03,934 | WARNING  | process 425684 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 05:46:37] 2025-07-26 03:46:03,934 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744950112/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:46:37] 2025-07-26 03:46:03,934 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744950112/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:46:37] 2025-07-26 03:46:03,935 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1918629 B
[2025-07-26 05:46:37] 2025-07-26 03:46:03,935 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-07-26 05:46:37] 2025-07-26 03:46:03,935 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,156 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 05:46:37] 2025-07-26 03:46:05,161 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3467.48025
[2025-07-26 05:46:37] 2025-07-26 03:46:05,163 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744950112/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,163 | INFO     | extracted standard info from prmon json
[2025-07-26 05:46:37] 2025-07-26 03:46:05,163 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:46:37] 2025-07-26 03:46:05,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:46:37] 2025-07-26 03:46:05,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:46:37] 2025-07-26 03:46:05,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:46:37] 2025-07-26 03:46:05,165 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:46:37] 2025-07-26 03:46:05,165 | INFO     | sum of square deviations: 120605052.0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | sum of deviations: -11123841904.000002
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | mean x: 1753499188.0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | mean y: 2554752.7808219176
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | -- intersect: 161734152415.07758
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | intersect: 161734152415.07758
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | chi2: 0.038994586602134604
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | -- intersect: 161734152415.07758
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | current memory leak: -92.23 B/s (using 73 data points, chi2=0.04)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | could have reported an average CPU frequency of 3782 MHz (6 samples)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | ..............................
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | . Timing measurements:
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | . get job = 0 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | . initial setup = 1 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | . payload setup = 5 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | . stage-in = 0 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | . payload execution = 4873 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,166 | INFO     | . stage-out = 0 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,167 | INFO     | . log creation = 0 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,167 | INFO     | ..............................
[2025-07-26 05:46:37] 2025-07-26 03:46:05,192 | INFO     | sufficient remaining disk space (236215861248 B)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,207 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,209 | INFO     | 
[2025-07-26 05:46:37] 2025-07-26 03:46:05,209 | INFO     | job summary report
[2025-07-26 05:46:37] 2025-07-26 03:46:05,209 | INFO     | --------------------------------------------------
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | PanDA job id: 6744950112
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | task id: 45743349
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | errors: (none)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | pilot state: finished 
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | transexitcode: 0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | exeerrorcode: 0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | exeerrordiag: 
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | exitcode: 0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | exitmsg: OK
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | cpuconsumptiontime: 18478 s
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | nevents: 400
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | neventsw: 0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | pid: 425684
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | pgrp: 425684
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | corecount: 4
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | event service: False
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | sizes: {0: 2397470, 4: 2397732, 11: 2397760, 4882: 2424140, 4883: 2433200, 4888: 2433338}
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | --------------------------------------------------
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | 
[2025-07-26 05:46:37] 2025-07-26 03:46:05,210 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 05:46:37] 2025-07-26 03:46:05,215 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6744950112: 2216468 B (within 2537553920 B limit)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,215 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6744950112/HITS.45743349._015689.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,215 | INFO     | total size of present files: 0 B (workdir size: 2216468 B)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,215 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6744950112/HITS.45743349._015689.pool.root.1 since it does not exist
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | job 6744950112 has completed (purged errors)
[2025-07-26 05:46:37] 2025-07-26 03:46:05,230 | INFO     | overall cleanup function is called
[2025-07-26 05:46:37] 2025-07-26 03:46:05,262 | INFO     | number of running child processes to parent process 425684: 1
[2025-07-26 05:46:37] 2025-07-26 03:46:05,262 | INFO     | maximum number of monitored processes: 6
[2025-07-26 05:46:37] 2025-07-26 03:46:05,263 | INFO     | aborting job monitoring since job object (job id=6744950112) has expired
[2025-07-26 05:46:37] 2025-07-26 03:46:06,237 | INFO     | --- collectZombieJob: --- 10, [425684]
[2025-07-26 05:46:37] 2025-07-26 03:46:06,238 | INFO     | zombie collector waiting for pid 425684
[2025-07-26 05:46:37] 2025-07-26 03:46:06,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:46:37] 2025-07-26 03:46:06,238 | INFO     | collected zombie processes
[2025-07-26 05:46:37] 2025-07-26 03:46:06,238 | INFO     | will attempt to kill all subprocesses of pid=425684
[2025-07-26 05:46:37] 2025-07-26 03:46:06,281 | INFO     | process IDs to be killed: [425684] (in reverse order)
[2025-07-26 05:46:37] 2025-07-26 03:46:06,314 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:46:37] 2025-07-26 03:46:06,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:46:37] 2025-07-26 03:46:06,316 | INFO     | did not find any defunct processes belonging to 425684
[2025-07-26 05:46:37] 2025-07-26 03:46:06,318 | INFO     | did not find any defunct processes belonging to 425684
[2025-07-26 05:46:37] 2025-07-26 03:46:06,318 | INFO     | ready for new job
[2025-07-26 05:46:37] 2025-07-26 03:46:06,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:46:37] 2025-07-26 03:46:06,319 | INFO     | ***************************************
[2025-07-26 05:46:37] 2025-07-26 03:46:06,319 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:46:37] 2025-07-26 03:46:06,319 | INFO     | ***************************************
[2025-07-26 05:46:37] 2025-07-26 03:46:06,319 | INFO     | 
[2025-07-26 05:46:37] 2025-07-26 03:46:06,319 | INFO     | architecture information:
[2025-07-26 05:46:37] 2025-07-26 03:46:06,320 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:46:37] 2025-07-26 03:46:06,334 | INFO     | cat /etc/os-release:
[2025-07-26 05:46:37] NAME="CentOS Linux"
[2025-07-26 05:46:37] VERSION="7 (Core)"
[2025-07-26 05:46:37] ID="centos"
[2025-07-26 05:46:37] ID_LIKE="rhel fedora"
[2025-07-26 05:46:37] VERSION_ID="7"
[2025-07-26 05:46:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:46:37] ANSI_COLOR="0;31"
[2025-07-26 05:46:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:46:37] HOME_URL="https://www.centos.org/"
[2025-07-26 05:46:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:46:37] 
[2025-07-26 05:46:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:46:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:46:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:46:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:46:37] 
[2025-07-26 05:46:37] 2025-07-26 03:46:06,334 | INFO     | ***************************************
[2025-07-26 05:46:37] 2025-07-26 03:46:06,837 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 05:46:37] 2025-07-26 03:46:06,855 | INFO     | sufficient remaining disk space (236219006976 B)
[2025-07-26 05:46:37] 2025-07-26 03:46:06,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:46:37] 2025-07-26 03:46:06,855 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:46:37] 2025-07-26 03:46:06,855 | INFO     | update_server=False
[2025-07-26 05:46:37] 2025-07-26 03:46:06,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:46:37] 2025-07-26 03:46:06,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:46:37] 2025-07-26 03:46:06,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:46:37] 2025-07-26 03:46:06,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:46:37] 2025-07-26 03:46:06,856 | INFO     | aborting loop
[2025-07-26 05:46:37] 2025-07-26 03:46:07,032 | INFO     | all payload control threads have been joined
[2025-07-26 05:46:37] 2025-07-26 03:46:07,861 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:07,862 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:07,862 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:07,862 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:07,866 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:07,903 | INFO     | all data control threads have been joined
[2025-07-26 05:46:37] 2025-07-26 03:46:08,034 | INFO     | [payload] control thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:08,157 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:08,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:46:37] 2025-07-26 03:46:08,240 | INFO     | all job control threads have been joined
[2025-07-26 05:46:37] 2025-07-26 03:46:08,445 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:08,664 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:08,909 | INFO     | [data] control thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:09,246 | INFO     | [job] control thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:09,252 | INFO     | [job] validate thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:09,303 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:10,233 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:10,863 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:17,250 | INFO     | job.realtimelogging is not enabled
[2025-07-26 05:46:37] 2025-07-26 03:46:18,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:46:37] 2025-07-26 03:46:18,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705616664384)>', '<ExcThread(monitor, started 139704515147520)>']
[2025-07-26 05:46:37] 2025-07-26 03:46:23,413 | INFO     | all workflow threads have been joined
[2025-07-26 05:46:37] 2025-07-26 03:46:23,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:46:37] 2025-07-26 03:46:23,413 | INFO     | traces error code: 0
[2025-07-26 05:46:37] 2025-07-26 03:46:23,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:46:37] 2025-07-26 03:46:37,125 | INFO     | PID=419065 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 05:46:37] 2025-07-26 03:46:37,125 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:46:37] 2025-07-26 03:46:37,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:46:37] 2025-07-26 03:46:37,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:46:37] 2025-07-26 03:46:37,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:46:37] 2025-07-26 03:46:37,126 | INFO     | [monitor] control thread has ended
[2025-07-26 05:46:37] 2025-07-26 03:46:37,201 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:46:37] 2025-07-26 03:46:37,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:46:37] 2025-07-26 03:46:37,210 [wrapper] pilotpid: 419065
[2025-07-26 05:46:37] 2025-07-26 03:46:37,214 [wrapper] Pilot exit status: 0
[2025-07-26 05:46:37] 2025-07-26 03:46:37,225 [wrapper] pandaids: 6744950112
[2025-07-26 05:46:37] 2025-07-26 03:46:37,248 [wrapper] cleanup supervisor_pilot  437882 419066
[2025-07-26 05:46:37] 2025-07-26 03:46:37,252 [wrapper] Test setup, not cleaning
[2025-07-26 05:46:37] 2025-07-26 03:46:37,256 [wrapper] apfmon messages muted
[2025-07-26 05:46:37] 2025-07-26 03:46:37,259 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:46:37] 2025-07-26 03:46:37,263 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:46:37]  *** Error codes and diagnostics ***
[2025-07-26 05:46:37]     "exeErrorCode": 0,
[2025-07-26 05:46:37]     "exeErrorDiag": "",
[2025-07-26 05:46:37]     "pilotErrorCode": 0,
[2025-07-26 05:46:37]     "pilotErrorDiag": "",
[2025-07-26 05:46:37]  *** Listing of results directory ***
[2025-07-26 05:46:37] total 350792
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc    530466 Jul 25 05:33 pilot3.tar.gz
[2025-07-26 05:46:37] -rwx------ 1 boinc boinc     36292 Jul 25 05:43 runpilot2-wrapper.sh
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc      5112 Jul 25 05:43 queuedata.json
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc       100 Jul 26 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:46:37] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 04:24 run_atlas
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc       105 Jul 26 04:24 job.xml
[2025-07-26 05:46:37] -rw-r--r-- 2 boinc boinc 142682711 Jul 26 04:24 EVNT.45743347._000874.pool.root.1
[2025-07-26 05:46:37] -rw-r--r-- 2 boinc boinc    542888 Jul 26 04:24 input.tar.gz
[2025-07-26 05:46:37] -rw-r--r-- 2 boinc boinc     15095 Jul 26 04:24 start_atlas.sh
[2025-07-26 05:46:37] drwxrwx--x 2 boinc boinc      4096 Jul 26 04:24 shared
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc         0 Jul 26 04:24 boinc_setup_complete
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc      6379 Jul 26 04:24 init_data.xml
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc         0 Jul 26 04:24 boinc_lockfile
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc      2559 Jul 26 04:24 pandaJob.out
[2025-07-26 05:46:37] -rw------- 1 boinc boinc    979977 Jul 26 04:24 agis_schedconf.cvmfs.json
[2025-07-26 05:46:37] -rw------- 1 boinc boinc   1593052 Jul 26 04:24 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:46:37] drwx------ 4 boinc boinc      4096 Jul 26 04:24 pilot3
[2025-07-26 05:46:37] -rw------- 1 boinc boinc 211238681 Jul 26 05:45 HITS.45743349._015689.pool.root.1
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc       529 Jul 26 05:45 boinc_task_state.xml
[2025-07-26 05:46:37] -rw------- 1 boinc boinc        95 Jul 26 05:45 pilot_heartbeat.json
[2025-07-26 05:46:37] -rw------- 1 boinc boinc      1022 Jul 26 05:45 memory_monitor_summary.json
[2025-07-26 05:46:37] -rw------- 1 boinc boinc    229063 Jul 26 05:46 log.45743349._015689.job.log.tgz.1
[2025-07-26 05:46:37] -rw------- 1 boinc boinc      7759 Jul 26 05:46 heartbeat.json
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc      8192 Jul 26 05:46 boinc_mmap_file
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc        27 Jul 26 05:46 wrapper_checkpoint.txt
[2025-07-26 05:46:37] -rw------- 1 boinc boinc       746 Jul 26 05:46 pilotlog.txt
[2025-07-26 05:46:37] -rw------- 1 boinc boinc    477740 Jul 26 05:46 log.45743349._015689.job.log.1
[2025-07-26 05:46:37] -rw------- 1 boinc boinc       357 Jul 26 05:46 output.list
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc       620 Jul 26 05:46 runtime_log
[2025-07-26 05:46:37] -rw------- 1 boinc boinc    727040 Jul 26 05:46 result.tar.gz
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc      8734 Jul 26 05:46 runtime_log.err
[2025-07-26 05:46:37] -rw------- 1 boinc boinc       658 Jul 26 05:46 8ukKDmAWOz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7OyKDmaqX2Uo.diag
[2025-07-26 05:46:37] -rw-r--r-- 1 boinc boinc     22462 Jul 26 05:46 stderr.txt
[2025-07-26 05:46:37] HITS file was successfully produced:
[2025-07-26 05:46:37] -rw------- 1 boinc boinc 211238681 Jul 26 05:45 shared/HITS.pool.root.1
[2025-07-26 05:46:37]  *** Contents of shared directory: ***
[2025-07-26 05:46:37] total 346896
[2025-07-26 05:46:37] -rw-r--r-- 2 boinc boinc 142682711 Jul 26 04:24 ATLAS.root_0
[2025-07-26 05:46:37] -rw-r--r-- 2 boinc boinc    542888 Jul 26 04:24 input.tar.gz
[2025-07-26 05:46:37] -rw-r--r-- 2 boinc boinc     15095 Jul 26 04:24 start_atlas.sh
[2025-07-26 05:46:37] -rw------- 1 boinc boinc 211238681 Jul 26 05:45 HITS.pool.root.1
[2025-07-26 05:46:37] -rw------- 1 boinc boinc    727040 Jul 26 05:46 result.tar.gz
05:46:39 (415364): run_atlas exited; CPU time 18492.701978
05:46:39 (415364): called boinc_finish(0)

</stderr_txt>
]]>

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