Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:45 (22125): wrapper (7.7.26015): starting
08:54:45 (22125): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 08:54:45] Arguments: --nthreads 12
[2025-07-25 08:54:45] Threads: 12
[2025-07-25 08:54:45] Checking for CVMFS
[2025-07-25 08:54:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 08:54:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 08:54:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 08:54:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 08:54:46] 2.11.2.0 4366 109101 107960 148741 1 330 13032653 18432001 917 130560 0 46887595 99.293 91173514 31250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 08:54:46] CVMFS is ok
[2025-07-25 08:54:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 08:54:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 08:54:46] Further information can be found at the LHC@home message board.
[2025-07-25 08:54:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 08:54:46] Checking for apptainer binary...
[2025-07-25 08:54:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 08:54:46] Running /usr/bin/apptainer --version
[2025-07-25 08:54:46] apptainer version 1.3.2-1.el7
[2025-07-25 08:54:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 08:54:46] c-206-29.aglt2.org
[2025-07-25 08:54:46] apptainer works
[2025-07-25 08:54:46] Set ATHENA_PROC_NUMBER=12
[2025-07-25 08:54:46] Set ATHENA_CORE_NUMBER=12
[2025-07-25 08:54:46] Starting ATLAS job with PandaID=6744953765
[2025-07-25 08:54:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:31:56 (11642): wrapper (7.7.26015): starting
10:31:56 (11642): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 10:31:56] Arguments: --nthreads 8
[2025-07-25 10:31:56] Threads: 8
[2025-07-25 10:31:56] This job has been restarted, cleaning up previous attempt
[2025-07-25 10:31:56] Checking for CVMFS
[2025-07-25 10:31:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 10:31:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 10:31:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 10:31:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 10:31:56] 2.11.2.0 4366 109198 104732 148744 0 9 13074000 18432001 1 130560 0 47041067 99.295 91177477 31250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 10:31:56] CVMFS is ok
[2025-07-25 10:31:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 10:31:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 10:31:56] Further information can be found at the LHC@home message board.
[2025-07-25 10:31:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 10:31:56] Checking for apptainer binary...
[2025-07-25 10:31:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 10:31:56] Running /usr/bin/apptainer --version
[2025-07-25 10:31:56] apptainer version 1.3.2-1.el7
[2025-07-25 10:31:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 10:31:57] c-206-29.aglt2.org
[2025-07-25 10:31:57] apptainer works
[2025-07-25 10:31:57] Set ATHENA_PROC_NUMBER=8
[2025-07-25 10:31:57] Set ATHENA_CORE_NUMBER=8
[2025-07-25 10:31:57] Starting ATLAS job with PandaID=6744953765
[2025-07-25 10:31:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:58:35 (4400): wrapper (7.7.26015): starting
13:58:35 (4400): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 13:58:35] Arguments: --nthreads 8
[2025-07-25 13:58:35] Threads: 8
[2025-07-25 13:58:35] This job has been restarted, cleaning up previous attempt
[2025-07-25 13:58:35] Checking for CVMFS
[2025-07-25 13:58:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 13:58:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 13:58:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 13:58:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 13:58:36] 2.11.2.0 4362 0 28764 148748 3 1 13174585 18432000 1 130560 0 3 100.000 0 n/a http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 13:58:36] CVMFS is ok
[2025-07-25 13:58:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 13:58:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 13:58:36] Further information can be found at the LHC@home message board.
[2025-07-25 13:58:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 13:58:36] Checking for apptainer binary...
[2025-07-25 13:58:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 13:58:36] Running /usr/bin/apptainer --version
[2025-07-25 13:58:37] apptainer version 1.3.2-1.el7
[2025-07-25 13:58:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 13:58:40] c-206-29.aglt2.org
[2025-07-25 13:58:40] apptainer works
[2025-07-25 13:58:40] Set ATHENA_PROC_NUMBER=8
[2025-07-25 13:58:40] Set ATHENA_CORE_NUMBER=8
[2025-07-25 13:58:40] Starting ATLAS job with PandaID=6744953765
[2025-07-25 13:58:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 17:21:43]  *** The last 200 lines of the pilot log: ***
[2025-07-25 17:21:43] 2025-07-25 21:21:11,017 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 17:21:43] 2025-07-25 21:21:11,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 17:21:43] 2025-07-25 21:21:11,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 17:21:43] 2025-07-25 21:21:11,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 17:21:43] 2025-07-25 21:21:11,024 | INFO     | fitting pss+swap vs Time
[2025-07-25 17:21:43] 2025-07-25 21:21:11,024 | INFO     | sum of square deviations: 2443580700.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,026 | INFO     | sum of deviations: 30907991729.000008
[2025-07-25 17:21:43] 2025-07-25 21:21:11,026 | INFO     | mean x: 1753472404.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,026 | INFO     | mean y: 2474666.1306532663
[2025-07-25 17:21:43] 2025-07-25 21:21:11,026 | INFO     | -- intersect: -22176580259.23431
[2025-07-25 17:21:43] 2025-07-25 21:21:11,027 | INFO     | intersect: -22176580259.23431
[2025-07-25 17:21:43] 2025-07-25 21:21:11,027 | INFO     | chi2: 2.3494112150053303
[2025-07-25 17:21:43] 2025-07-25 21:21:11,027 | INFO     | sum of square deviations: 2263977332.5
[2025-07-25 17:21:43] 2025-07-25 21:21:11,029 | INFO     | sum of deviations: 43087474501.00001
[2025-07-25 17:21:43] 2025-07-25 21:21:11,029 | INFO     | mean x: 1753472251.5
[2025-07-25 17:21:43] 2025-07-25 21:21:11,029 | INFO     | mean y: 2484777.432989691
[2025-07-25 17:21:43] 2025-07-25 21:21:11,030 | INFO     | -- intersect: -33369179258.305458
[2025-07-25 17:21:43] 2025-07-25 21:21:11,030 | INFO     | intersect: -33369179258.305458
[2025-07-25 17:21:43] 2025-07-25 21:21:11,030 | INFO     | chi2: 1.5712679440063657
[2025-07-25 17:21:43] 2025-07-25 21:21:11,030 | INFO     | current chi2=1.5712679440063657 (change=33.120777922105866 %)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,031 | INFO     | sum of square deviations: 2093397390.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,032 | INFO     | sum of deviations: 41700439299.00001
[2025-07-25 17:21:43] 2025-07-25 21:21:11,033 | INFO     | mean x: 1753472099.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,033 | INFO     | mean y: 2483537.1904761903
[2025-07-25 17:21:43] 2025-07-25 21:21:11,033 | INFO     | -- intersect: -34926649926.01673
[2025-07-25 17:21:43] 2025-07-25 21:21:11,033 | INFO     | intersect: -34926649926.01673
[2025-07-25 17:21:43] 2025-07-25 21:21:11,033 | INFO     | chi2: 1.571615775628379
[2025-07-25 17:21:43] 2025-07-25 21:21:11,034 | INFO     | current chi2=1.571615775628379 (change=-0.022137002370611666 %)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,034 | INFO     | right removable region: 188
[2025-07-25 17:21:43] 2025-07-25 21:21:11,034 | INFO     | sum of square deviations: 2263977332.5
[2025-07-25 17:21:43] 2025-07-25 21:21:11,036 | INFO     | sum of deviations: -2147154250.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,036 | INFO     | mean x: 1753472556.5
[2025-07-25 17:21:43] 2025-07-25 21:21:11,036 | INFO     | mean y: 2502449.1649484537
[2025-07-25 17:21:43] 2025-07-25 21:21:11,036 | INFO     | -- intersect: 1665494387.246705
[2025-07-25 17:21:43] 2025-07-25 21:21:11,037 | INFO     | intersect: 1665494387.246705
[2025-07-25 17:21:43] 2025-07-25 21:21:11,037 | INFO     | chi2: 0.813827029063757
[2025-07-25 17:21:43] 2025-07-25 21:21:11,037 | INFO     | current chi2=0.813827029063757 (change=65.36038374781018 %)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,038 | INFO     | sum of square deviations: 2093397390.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,039 | INFO     | sum of deviations: -4352900159.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,039 | INFO     | mean x: 1753472709.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,040 | INFO     | mean y: 2504401.1481481483
[2025-07-25 17:21:43] 2025-07-25 21:21:11,040 | INFO     | -- intersect: 3648583100.9062767
[2025-07-25 17:21:43] 2025-07-25 21:21:11,040 | INFO     | intersect: 3648583100.9062767
[2025-07-25 17:21:43] 2025-07-25 21:21:11,040 | INFO     | chi2: 0.8020556082586929
[2025-07-25 17:21:43] 2025-07-25 21:21:11,041 | INFO     | current chi2=0.8020556082586929 (change=1.4464278507198491 %)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,041 | INFO     | left removable region: 20
[2025-07-25 17:21:43] 2025-07-25 21:21:11,041 | INFO     | sum of square deviations: 1470248962.0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,042 | INFO     | sum of deviations: 4639702211.999999
[2025-07-25 17:21:43] 2025-07-25 21:21:11,043 | INFO     | mean x: 1753472678.5
[2025-07-25 17:21:43] 2025-07-25 21:21:11,043 | INFO     | mean y: 2518521.8571428573
[2025-07-25 17:21:43] 2025-07-25 21:21:11,043 | INFO     | -- intersect: -5530960008.235513
[2025-07-25 17:21:43] 2025-07-25 21:21:11,043 | INFO     | intersect: -5530960008.235513
[2025-07-25 17:21:43] 2025-07-25 21:21:11,044 | INFO     | chi2: 0.0012370072159728733
[2025-07-25 17:21:43] 2025-07-25 21:21:11,044 | INFO     | -- intersect: -5530960008.235513
[2025-07-25 17:21:43] 2025-07-25 21:21:11,044 | INFO     | current memory leak: 3.16 B/s (using 168 data points, chi2=0.00)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,044 | INFO     | could have reported an average CPU frequency of 2372 MHz (10 samples)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,045 | INFO     | ..............................
[2025-07-25 17:21:43] 2025-07-25 21:21:11,045 | INFO     | . Timing measurements:
[2025-07-25 17:21:43] 2025-07-25 21:21:11,045 | INFO     | . get job = 0 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,045 | INFO     | . initial setup = 2 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,045 | INFO     | . payload setup = 10 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,045 | INFO     | . stage-in = 0 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,046 | INFO     | . payload execution = 12100 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,046 | INFO     | . stage-out = 2 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,046 | INFO     | . log creation = 0 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,046 | INFO     | ..............................
[2025-07-25 17:21:43] 2025-07-25 21:21:11,186 | INFO     | 
[2025-07-25 17:21:43] 2025-07-25 21:21:11,186 | INFO     | job summary report
[2025-07-25 17:21:43] 2025-07-25 21:21:11,186 | INFO     | --------------------------------------------------
[2025-07-25 17:21:43] 2025-07-25 21:21:11,186 | INFO     | PanDA job id: 6744953765
[2025-07-25 17:21:43] 2025-07-25 21:21:11,186 | INFO     | task id: 45743349
[2025-07-25 17:21:43] 2025-07-25 21:21:11,186 | INFO     | errors: (none)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | pilot state: finished 
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | transexitcode: 0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | exeerrorcode: 0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | exeerrordiag: 
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | exitcode: 0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | exitmsg: OK
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | cpuconsumptiontime: 92308 s
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | nevents: 400
[2025-07-25 17:21:43] 2025-07-25 21:21:11,187 | INFO     | neventsw: 0
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | pid: 4620
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | pgrp: 4620
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | corecount: 8
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | event service: False
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | sizes: {0: 2397471, 4: 2397733, 11: 2397761, 12114: 2427337, 12117: 2436391, 12120: 2436529}
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | --------------------------------------------------
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | 
[2025-07-25 17:21:43] 2025-07-25 21:21:11,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-25 17:21:43] 2025-07-25 21:21:11,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,203 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,203 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | job 6744953765 has completed (purged errors)
[2025-07-25 17:21:43] 2025-07-25 21:21:11,205 | INFO     | overall cleanup function is called
[2025-07-25 17:21:43] 2025-07-25 21:21:12,213 | INFO     | --- collectZombieJob: --- 10, [4620]
[2025-07-25 17:21:43] 2025-07-25 21:21:12,213 | INFO     | zombie collector waiting for pid 4620
[2025-07-25 17:21:43] 2025-07-25 21:21:12,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 17:21:43] 2025-07-25 21:21:12,213 | INFO     | collected zombie processes
[2025-07-25 17:21:43] 2025-07-25 21:21:12,213 | INFO     | will attempt to kill all subprocesses of pid=4620
[2025-07-25 17:21:43] 2025-07-25 21:21:12,335 | INFO     | process IDs to be killed: [4620] (in reverse order)
[2025-07-25 17:21:43] 2025-07-25 21:21:12,399 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 17:21:43] 2025-07-25 21:21:12,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 17:21:43] 2025-07-25 21:21:12,402 | INFO     | did not find any defunct processes belonging to 4620
[2025-07-25 17:21:43] 2025-07-25 21:21:12,404 | INFO     | did not find any defunct processes belonging to 4620
[2025-07-25 17:21:43] 2025-07-25 21:21:12,404 | INFO     | ready for new job
[2025-07-25 17:21:43] 2025-07-25 21:21:12,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 17:21:43] 2025-07-25 21:21:12,406 | INFO     | ***************************************
[2025-07-25 17:21:43] 2025-07-25 21:21:12,406 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 17:21:43] 2025-07-25 21:21:12,406 | INFO     | ***************************************
[2025-07-25 17:21:43] 2025-07-25 21:21:12,406 | INFO     | 
[2025-07-25 17:21:43] 2025-07-25 21:21:12,407 | INFO     | architecture information:
[2025-07-25 17:21:43] 2025-07-25 21:21:12,407 | INFO     | executing command: cat /etc/os-release
[2025-07-25 17:21:43] 2025-07-25 21:21:12,417 | INFO     | cat /etc/os-release:
[2025-07-25 17:21:43] NAME="CentOS Linux"
[2025-07-25 17:21:43] VERSION="7 (Core)"
[2025-07-25 17:21:43] ID="centos"
[2025-07-25 17:21:43] ID_LIKE="rhel fedora"
[2025-07-25 17:21:43] VERSION_ID="7"
[2025-07-25 17:21:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 17:21:43] ANSI_COLOR="0;31"
[2025-07-25 17:21:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 17:21:43] HOME_URL="https://www.centos.org/"
[2025-07-25 17:21:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 17:21:43] 
[2025-07-25 17:21:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 17:21:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 17:21:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 17:21:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 17:21:43] 
[2025-07-25 17:21:43] 2025-07-25 21:21:12,418 | INFO     | ***************************************
[2025-07-25 17:21:43] 2025-07-25 21:21:12,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-25 17:21:43] 2025-07-25 21:21:12,936 | INFO     | sufficient remaining disk space (28286386176 B)
[2025-07-25 17:21:43] 2025-07-25 21:21:12,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 17:21:43] 2025-07-25 21:21:12,936 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 17:21:43] 2025-07-25 21:21:12,936 | INFO     | update_server=False
[2025-07-25 17:21:43] 2025-07-25 21:21:12,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 17:21:43] 2025-07-25 21:21:12,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:21:43] 2025-07-25 21:21:12,975 | INFO     | all payload control threads have been joined
[2025-07-25 17:21:43] 2025-07-25 21:21:13,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 17:21:43] 2025-07-25 21:21:13,166 | INFO     | aborting loop
[2025-07-25 17:21:43] 2025-07-25 21:21:13,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 17:21:43] 2025-07-25 21:21:13,531 | INFO     | all data control threads have been joined
[2025-07-25 17:21:43] 2025-07-25 21:21:13,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 17:21:43] 2025-07-25 21:21:13,942 | INFO     | [job] queue monitor thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:13,942 | INFO     | all job control threads have been joined
[2025-07-25 17:21:43] 2025-07-25 21:21:13,943 | INFO     | [job] retrieve thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:13,981 | INFO     | [payload] control thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:13,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,167 | INFO     | [job] job monitor thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,423 | INFO     | [payload] validate_post thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,537 | INFO     | [data] control thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,752 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,948 | INFO     | [job] control thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,965 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,965 | INFO     | [data] copytool_in thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:14,969 | INFO     | [job] validate thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:15,217 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:15,234 | INFO     | [data] copytool_out thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:15,394 | INFO     | [payload] failed_post thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:17,816 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 17:21:43] 2025-07-25 21:21:19,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140237688059712)>', '<ExcThread(monitor, started 140237082699520)>']
[2025-07-25 17:21:43] 2025-07-25 21:21:24,442 | INFO     | all workflow threads have been joined
[2025-07-25 17:21:43] 2025-07-25 21:21:24,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 17:21:43] 2025-07-25 21:21:24,445 | INFO     | traces error code: 0
[2025-07-25 17:21:43] 2025-07-25 21:21:24,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 17:21:43] 2025-07-25 21:21:43,252 | INFO     | PID=16599 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 17:21:43] 2025-07-25 21:21:43,253 | INFO     | .. there are 3 such processes running
[2025-07-25 17:21:43] 2025-07-25 21:21:43,254 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 17:21:43] 2025-07-25 21:21:43,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 17:21:43] 2025-07-25 21:21:43,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 17:21:43] 2025-07-25 21:21:43,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 17:21:43] 2025-07-25 21:21:43,254 | INFO     | [monitor] control thread has ended
[2025-07-25 17:21:43] 2025-07-25 21:21:43,360 [wrapper] ==== pilot stdout END ====
[2025-07-25 17:21:43] 2025-07-25 21:21:43,363 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 17:21:43] 2025-07-25 21:21:43,365 [wrapper] pilotpid: 16599
[2025-07-25 17:21:43] 2025-07-25 21:21:43,367 [wrapper] Pilot exit status: 0
[2025-07-25 17:21:43] 2025-07-25 21:21:43,384 [wrapper] pandaids: 6744953765 6744953765 6744953765
[2025-07-25 17:21:43] 2025-07-25 21:21:43,413 [wrapper] cleanup supervisor_pilot 18403 16601
[2025-07-25 17:21:43] 2025-07-25 21:21:43,416 [wrapper] Test setup, not cleaning
[2025-07-25 17:21:43] 2025-07-25 21:21:43,419 [wrapper] apfmon messages muted
[2025-07-25 17:21:43] 2025-07-25 21:21:43,421 [wrapper] ==== wrapper stdout END ====
[2025-07-25 17:21:43] 2025-07-25 21:21:43,424 [wrapper] ==== wrapper stderr END ====
[2025-07-25 17:21:43]  *** Error codes and diagnostics ***
[2025-07-25 17:21:43]     "exeErrorCode": 0,
[2025-07-25 17:21:43]     "exeErrorDiag": "",
[2025-07-25 17:21:43]     "pilotErrorCode": 0,
[2025-07-25 17:21:43]     "pilotErrorDiag": "",
[2025-07-25 17:21:43]  *** Listing of results directory ***
[2025-07-25 17:21:43] total 500804
[2025-07-25 17:21:43] drwx------ 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 02:05 pilot3.tar.gz
[2025-07-25 17:21:43] -rwx------ 1 boincer umatlas     36292 Jul 25 02:24 runpilot2-wrapper.sh
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 02:24 queuedata.json
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas       100 Jul 25 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 17:21:43] -rwxr-xr-x 1 boincer umatlas      7986 Jul 25 08:54 run_atlas
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas       105 Jul 25 08:54 job.xml
[2025-07-25 17:21:43] -rw-r--r-- 3 boincer umatlas 146830052 Jul 25 08:54 EVNT.45743347._001102.pool.root.1
[2025-07-25 17:21:43] -rw-r--r-- 3 boincer umatlas 146830052 Jul 25 08:54 ATLAS.root_0
[2025-07-25 17:21:43] drwxrwx--x 2 boincer umatlas      4096 Jul 25 08:54 shared
[2025-07-25 17:21:43] -rw-r--r-- 2 boincer umatlas    542894 Jul 25 08:54 input.tar.gz
[2025-07-25 17:21:43] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 08:54 start_atlas.sh
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas         0 Jul 25 08:54 boinc_lockfile
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas      2561 Jul 25 13:58 pandaJob.out
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas    979309 Jul 25 13:58 agis_schedconf.cvmfs.json
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas      5951 Jul 25 17:12 init_data.xml
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas 212323596 Jul 25 17:20 HITS.45743349._017243.pool.root.1
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas       532 Jul 25 17:21 boinc_task_state.xml
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas      1049 Jul 25 17:21 memory_monitor_summary.json
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas   1593052 Jul 25 17:21 agis_ddmendpoints.agis.ALL.json
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas    365422 Jul 25 17:21 log.45743349._017243.job.log.tgz.1
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas      7849 Jul 25 17:21 heartbeat.json
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 17:21 boinc_mmap_file
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas        29 Jul 25 17:21 wrapper_checkpoint.txt
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas       820 Jul 25 17:21 pilotlog.txt
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas        97 Jul 25 17:21 pilot_heartbeat.json
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas   1115352 Jul 25 17:21 log.45743349._017243.job.log.1
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas       357 Jul 25 17:21 output.list
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas       620 Jul 25 17:21 runtime_log
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas   1495040 Jul 25 17:21 result.tar.gz
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas      8746 Jul 25 17:21 runtime_log.err
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas       912 Jul 25 17:21 ezUMDmR2Qz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLZyKDmsYv7gm.diag
[2025-07-25 17:21:43] -rw-r--r-- 1 boincer umatlas     25147 Jul 25 17:21 stderr.txt
[2025-07-25 17:21:43] HITS file was successfully produced:
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas 212323596 Jul 25 17:20 shared/HITS.pool.root.1
[2025-07-25 17:21:43]  *** Contents of shared directory: ***
[2025-07-25 17:21:43] total 352752
[2025-07-25 17:21:43] -rw-r--r-- 3 boincer umatlas 146830052 Jul 25 08:54 ATLAS.root_0
[2025-07-25 17:21:43] -rw-r--r-- 2 boincer umatlas    542894 Jul 25 08:54 input.tar.gz
[2025-07-25 17:21:43] -rw-r--r-- 2 boincer umatlas     15095 Jul 25 08:54 start_atlas.sh
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas 212323596 Jul 25 17:20 HITS.pool.root.1
[2025-07-25 17:21:43] -rw------- 1 boincer umatlas   1495040 Jul 25 17:21 result.tar.gz
17:21:44 (4400): run_atlas exited; CPU time 92551.034665
17:21:44 (4400): called boinc_finish(0)

</stderr_txt>
]]>

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