Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 16:09:36 (11712): Detected: vboxwrapper 26206
2025-07-25 16:09:36 (11712): Detected: BOINC client v8.0.2
2025-07-25 16:09:36 (11712): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-25 16:09:37 (11712): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 16:09:37 (11712): Create VM. (boinc_69761f7dd6f4cced, slot#4)
2025-07-25 16:09:38 (11712): Setting Memory Size for VM. (4400MB)
2025-07-25 16:09:38 (11712): Setting CPU Count for VM. (4)
2025-07-25 16:09:38 (11712): Setting Chipset Options for VM.
2025-07-25 16:09:39 (11712): Setting Graphics Controller Options for VM.
2025-07-25 16:09:39 (11712): Setting Boot Options for VM.
2025-07-25 16:09:39 (11712): Setting Network Configuration for NAT.
2025-07-25 16:09:39 (11712): Enabling VM Network Access.
2025-07-25 16:09:40 (11712): Disabling USB Support for VM.
2025-07-25 16:09:40 (11712): Disabling COM Port Support for VM.
2025-07-25 16:09:40 (11712): Disabling LPT Port Support for VM.
2025-07-25 16:09:41 (11712): Disabling Audio Support for VM.
2025-07-25 16:09:41 (11712): Disabling Clipboard Support for VM.
2025-07-25 16:09:41 (11712): Disabling Drag and Drop Support for VM.
2025-07-25 16:09:41 (11712): Adding storage controller(s) to VM.
2025-07-25 16:09:42 (11712): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 16:09:45 (11712): Adding VirtualBox Guest Additions to VM.
2025-07-25 16:09:45 (11712): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 16:09:45 (11712): forwarding host port 56191 to guest port 80
2025-07-25 16:09:45 (11712): Enabling remote desktop for VM.
2025-07-25 16:09:46 (11712): Required extension pack not installed, remote desktop not enabled.
2025-07-25 16:09:46 (11712): Enabling shared directory for VM.
2025-07-25 16:09:46 (11712): Starting VM using VBoxManage interface. (boinc_69761f7dd6f4cced, slot#4)
2025-07-25 16:09:53 (11712): Successfully started VM. (PID = '12768')
2025-07-25 16:09:53 (11712): Reporting VM Process ID to BOINC.
2025-07-25 16:09:53 (11712): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-25 16:09:53 (11712): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 16:09:53 (11712): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 16:09:53 (11712): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 16:09:53 (11712): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 16:09:53 (11712): Detected: Web Application Enabled (http://localhost:56191)
2025-07-25 16:09:53 (11712): Preference change detected
2025-07-25 16:09:53 (11712): Setting CPU throttle for VM. (100%)
2025-07-25 16:09:53 (11712): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 16:09:55 (11712): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 16:09:55 (11712): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 16:09:58 (11712): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 16:09:58 (11712): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 16:09:58 (11712): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 16:10:03 (11712): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 16:10:03 (11712): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 16:10:13 (11712): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.000291 main     Log opened 2025-07-25T16:10:10.761201000Z
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.000581 main     OS Product: Linux
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.000657 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.000712 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.000768 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.000770 main     Process ID: 1301
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.000771 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 16:10:13 (11712): Guest Log: 00:00:00.003212 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 16:10:13 (11712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 16:10:13 (11712): Guest Log: [INFO] Mounting shared directory
2025-07-25 16:10:13 (11712): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 16:10:23 (11712): Guest Log: 00:00:10.008102 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 263 431 000ns (GuestNow=1 753 449 022 504 246 000 ns GuestLast=1 753 459 810 767 677 000 ns fSetTimeLastLoop=true )
2025-07-25 16:10:40 (11712): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 16:10:40 (11712): Guest Log: [INFO] Detected branch: prod
2025-07-25 16:10:40 (11712): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 16:10:40 (11712): Guest Log: Copying input files
2025-07-25 16:10:42 (11712): Guest Log: Copied input files into RunAtlas.
2025-07-25 16:10:42 (11712): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 16:10:42 (11712): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 16:10:42 (11712): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 16:10:42 (11712): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 16:10:57 (11712): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 16:10:57 (11712): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 16:10:57 (11712): Guest Log: 2.6.3.0 1583 0 32220 148741 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 16:10:58 (11712): Guest Log: copied the webapp to /var/www
2025-07-25 16:10:58 (11712): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-25 16:10:58 (11712): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-25 16:10:58 (11712): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 16:10:58 (11712): Guest Log:  *** Starting ATLAS job. (PandaID=6744953658 taskID=45743349) ***
2025-07-25 17:51:23 (11712): Status Report: Elapsed Time: '6000.857798'
2025-07-25 17:51:23 (11712): Status Report: CPU Time: '21388.531250'
2025-07-25 19:36:11 (11712): Status Report: Elapsed Time: '12000.973127'
2025-07-25 19:36:11 (11712): Status Report: CPU Time: '45730.703125'
2025-07-25 21:23:12 (11712): Status Report: Elapsed Time: '18001.693163'
2025-07-25 21:23:12 (11712): Status Report: CPU Time: '70469.171875'
2025-07-25 22:33:38 (11712): Guest Log:  *** Job finished ***
2025-07-25 22:33:38 (11712): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:28,350 | INFO     | [payload] failed_post thread has finished
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:28,352 | INFO     | [payload] validate_post thread has finished
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:30,083 | INFO     | [data] queue_monitor thread has finished
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:31,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411819038528)>', '<ExcThread(monitor, started 140410794010368)>']
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:31,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:31,793 | INFO     | [monitor] control thread has ended
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,452 | INFO     | all workflow threads have been joined
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,453 | INFO     | end of generic workflow (traces error code: 0)
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,453 | INFO     | traces error code: 0
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,613 [wrapper] ==== pilot stdout END ====
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,623 [wrapper] ==== wrapper stdout RESUME ====
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,632 [wrapper] pilotpid: 5900
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,640 [wrapper] Pilot exit status: 0
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,747 [wrapper] pandaids: 6744953658
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,812 [wrapper] cleanup supervisor_pilot 26338 5901
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,824 [wrapper] Test setup, not cleaning
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,834 [wrapper] apfmon messages muted
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,844 [wrapper] ==== wrapper stdout END ====
2025-07-25 22:33:38 (11712): Guest Log: 2025-07-25 19:33:36,855 [wrapper] ==== wrapper stderr END ====
2025-07-25 22:33:38 (11712): Guest Log:  *** Error codes and diagnostics ***
2025-07-25 22:33:38 (11712): Guest Log:     "exeErrorCode": 0,
2025-07-25 22:33:38 (11712): Guest Log:     "exeErrorDiag": "",
2025-07-25 22:33:38 (11712): Guest Log:     "pilotErrorCode": 0,
2025-07-25 22:33:38 (11712): Guest Log:     "pilotErrorDiag": "",
2025-07-25 22:33:38 (11712): Guest Log:  *** Listing of results directory ***
2025-07-25 22:33:38 (11712): Guest Log: total 209056
2025-07-25 22:33:38 (11712): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 25 06:05 pilot3.tar.gz
2025-07-25 22:33:38 (11712): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 25 06:13 runpilot2-wrapper.sh
2025-07-25 22:33:38 (11712): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 25 06:13 queuedata.json
2025-07-25 22:33:38 (11712): Guest Log: -rwxr-xr-x. 1 atlas atlas      9227 Jul 25 13:10 init_data.xml
2025-07-25 22:33:38 (11712): Guest Log: -rwxr-xr-x. 1 atlas atlas    542875 Jul 25 13:10 input.tar.gz
2025-07-25 22:33:38 (11712): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 25 13:10 start_atlas.sh
2025-07-25 22:33:38 (11712): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 25 13:10 EVNT.45743347._001095.pool.root.1 -> /data/./ATLAS.root_0
2025-07-25 22:33:38 (11712): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Jul 25 13:10 pandaJob.out
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas    979309 Jul 25 13:11 agis_schedconf.cvmfs.json
2025-07-25 22:33:38 (11712): Guest Log: drwx------. 4 atlas atlas      4096 Jul 25 13:12 pilot3
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas 205750539 Jul 25 19:29 HITS.45743349._017136.pool.root.1
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas      1003 Jul 25 19:30 memory_monitor_summary.json
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 25 19:30 agis_ddmendpoints.agis.ALL.json
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas    384983 Jul 25 19:30 log.45743349._017136.job.log.tgz.1
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas        95 Jul 25 19:32 pilot_heartbeat.json
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas      7736 Jul 25 19:33 heartbeat.json
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 25 19:33 pilotlog.txt
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas   1869677 Jul 25 19:33 log.45743349._017136.job.log.1
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas       357 Jul 25 19:33 output.list
2025-07-25 22:33:38 (11712): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 25 19:33 runtime_log
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas   2273280 Jul 25 19:33 result.tar.gz
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas       662 Jul 25 19:33 TncMDmYrQz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiYyKDm76Swdn.diag
2025-07-25 22:33:38 (11712): Guest Log: -rw-r--r--. 1 atlas atlas      8609 Jul 25 19:33 runtime_log.err
2025-07-25 22:33:38 (11712): Guest Log: Looking for outputfile HITS.45743349._017136.pool.root.1
2025-07-25 22:33:38 (11712): Guest Log: HITS file was successfully produced
2025-07-25 22:33:38 (11712): Guest Log: -rw-------. 1 atlas atlas 205750539 Jul 25 19:29 /home/atlas/RunAtlas/HITS.45743349._017136.pool.root.1
2025-07-25 22:33:40 (11712): Guest Log: Successfully finished the ATLAS job!
2025-07-25 22:33:40 (11712): Guest Log: Copying the results back to the shared directory!
2025-07-25 22:33:40 (11712): Guest Log:  *** Contents of shared directory: ***
2025-07-25 22:33:40 (11712): Guest Log: total 346556
2025-07-25 22:33:40 (11712): Guest Log: -rwxrwxrwx. 1 root root 146269065 Jul 25 13:09 ATLAS.root_0
2025-07-25 22:33:40 (11712): Guest Log: -rwxrwxrwx. 1 root root 205750539 Jul 25 19:33 HITS.pool.root.1
2025-07-25 22:33:40 (11712): Guest Log: -rwxrwxrwx. 1 root root      9227 Jul 25 13:09 init_data.xml
2025-07-25 22:33:40 (11712): Guest Log: -rwxrwxrwx. 1 root root    542875 Jul 25 12:33 input.tar.gz
2025-07-25 22:33:40 (11712): Guest Log: -rwxrwxrwx. 1 root root   2273280 Jul 25 19:33 result.tar.gz
2025-07-25 22:33:40 (11712): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 25 12:33 start_atlas.sh
2025-07-25 22:33:40 (11712): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-25 22:33:40 (11712): VM Completion File Detected.
2025-07-25 22:33:40 (11712): Powering off VM.
2025-07-25 22:33:41 (11712): Successfully stopped VM.
2025-07-25 22:33:41 (11712): Deregistering VM. (boinc_69761f7dd6f4cced, slot#4)
2025-07-25 22:33:41 (11712): Removing network bandwidth throttle group from VM.
2025-07-25 22:33:41 (11712): Removing VM from VirtualBox.
22:33:47 (11712): called boinc_finish(0)

</stderr_txt>
]]>

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