Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:58:08 (32603): wrapper (7.7.26015): starting
21:58:08 (32603): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 21:58:08] Arguments: --nthreads 8
[2025-07-25 21:58:08] Threads: 8
[2025-07-25 21:58:08] Checking for CVMFS
[2025-07-25 21:58:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:58:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:58:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:58:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:58:10] 2.11.2.0 16765 107113 136876 148751 2 155 22566758 25165824 4353 130560 0 82009036 99.862 47659561 3349 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-25 21:58:10] CVMFS is ok
[2025-07-25 21:58:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:58:10] Checking for apptainer binary...
[2025-07-25 21:58:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:58:10] Running /usr/bin/apptainer --version
[2025-07-25 21:58:11] apptainer version 1.3.2-1.el7
[2025-07-25 21:58:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:58:12] cg-vwn404.simple-grid.lan
[2025-07-25 21:58:12] apptainer works
[2025-07-25 21:58:12] Set ATHENA_PROC_NUMBER=8
[2025-07-25 21:58:12] Set ATHENA_CORE_NUMBER=8
[2025-07-25 21:58:12] Starting ATLAS job with PandaID=6744979025
[2025-07-25 21:58:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 06:44:26]  *** The last 200 lines of the pilot log: ***
[2025-07-26 06:44:26] 2025-07-26 00:25:51,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 06:44:26] 2025-07-26 00:25:51,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 06:44:26] 2025-07-26 00:25:51,671 | INFO     | fitting pss+swap vs Time
[2025-07-26 06:44:26] 2025-07-26 00:25:51,679 | INFO     | sum of square deviations: 5513070810.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,681 | INFO     | sum of deviations: 23311346786.00004
[2025-07-26 06:44:26] 2025-07-26 00:25:51,681 | INFO     | mean x: 1753481495.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,681 | INFO     | mean y: 2485607.804597701
[2025-07-26 06:44:26] 2025-07-26 00:25:51,682 | INFO     | -- intersect: -7411896797.484839
[2025-07-26 06:44:26] 2025-07-26 00:25:51,682 | INFO     | intersect: -7411896797.484839
[2025-07-26 06:44:26] 2025-07-26 00:25:51,682 | INFO     | chi2: 2.3423621974928217
[2025-07-26 06:44:26] 2025-07-26 00:25:51,683 | INFO     | sum of square deviations: 5202255680.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,685 | INFO     | sum of deviations: 39939374270.5
[2025-07-26 06:44:26] 2025-07-26 00:25:51,685 | INFO     | mean x: 1753481342.5
[2025-07-26 06:44:26] 2025-07-26 00:25:51,685 | INFO     | mean y: 2493634.22265625
[2025-07-26 06:44:26] 2025-07-26 00:25:51,685 | INFO     | -- intersect: -13459541283.37799
[2025-07-26 06:44:26] 2025-07-26 00:25:51,685 | INFO     | intersect: -13459541283.37799
[2025-07-26 06:44:26] 2025-07-26 00:25:51,686 | INFO     | chi2: 1.5729615339649958
[2025-07-26 06:44:26] 2025-07-26 00:25:51,686 | INFO     | current chi2=1.5729615339649958 (change=32.8472114326027 %)
[2025-07-26 06:44:26] 2025-07-26 00:25:51,686 | INFO     | sum of square deviations: 4903347750.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,688 | INFO     | sum of deviations: 38917453501.000015
[2025-07-26 06:44:26] 2025-07-26 00:25:51,688 | INFO     | mean x: 1753481190.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,689 | INFO     | mean y: 2493112.609561753
[2025-07-26 06:44:26] 2025-07-26 00:25:51,689 | INFO     | -- intersect: -13914737758.218061
[2025-07-26 06:44:26] 2025-07-26 00:25:51,689 | INFO     | intersect: -13914737758.218061
[2025-07-26 06:44:26] 2025-07-26 00:25:51,696 | INFO     | chi2: 1.5736589064000814
[2025-07-26 06:44:26] 2025-07-26 00:25:51,696 | INFO     | current chi2=1.5736589064000814 (change=-0.044334996122106514 %)
[2025-07-26 06:44:26] 2025-07-26 00:25:51,696 | INFO     | right removable region: 250
[2025-07-26 06:44:26] 2025-07-26 00:25:51,696 | INFO     | sum of square deviations: 5202255680.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,698 | INFO     | sum of deviations: -18485318640.5
[2025-07-26 06:44:26] 2025-07-26 00:25:51,699 | INFO     | mean x: 1753481647.5
[2025-07-26 06:44:26] 2025-07-26 00:25:51,699 | INFO     | mean y: 2505950.33984375
[2025-07-26 06:44:26] 2025-07-26 00:25:51,699 | INFO     | -- intersect: 6233200667.810246
[2025-07-26 06:44:26] 2025-07-26 00:25:51,699 | INFO     | intersect: 6233200667.810246
[2025-07-26 06:44:26] 2025-07-26 00:25:51,699 | INFO     | chi2: 0.8731772698782754
[2025-07-26 06:44:26] 2025-07-26 00:25:51,700 | INFO     | current chi2=0.8731772698782754 (change=62.72236331286032 %)
[2025-07-26 06:44:26] 2025-07-26 00:25:51,700 | INFO     | sum of square deviations: 4903347750.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,702 | INFO     | sum of deviations: -15475580500.999998
[2025-07-26 06:44:26] 2025-07-26 00:25:51,702 | INFO     | mean x: 1753481800.0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,702 | INFO     | mean y: 2504387.470119522
[2025-07-26 06:44:26] 2025-07-26 00:25:51,703 | INFO     | -- intersect: 5536712878.584865
[2025-07-26 06:44:26] 2025-07-26 00:25:51,703 | INFO     | intersect: 5536712878.584865
[2025-07-26 06:44:26] 2025-07-26 00:25:51,703 | INFO     | chi2: 0.8551462013636079
[2025-07-26 06:44:26] 2025-07-26 00:25:51,703 | INFO     | current chi2=0.8551462013636079 (change=2.0649951775750095 %)
[2025-07-26 06:44:26] 2025-07-26 00:25:51,703 | INFO     | left removable region: 20
[2025-07-26 06:44:26] 2025-07-26 00:25:51,704 | INFO     | sum of square deviations: 3772712597.5
[2025-07-26 06:44:26] 2025-07-26 00:25:51,718 | INFO     | sum of deviations: 11503178516.999998
[2025-07-26 06:44:26] 2025-07-26 00:25:51,718 | INFO     | mean x: 1753481769.5
[2025-07-26 06:44:26] 2025-07-26 00:25:51,718 | INFO     | mean y: 2506782.5739130434
[2025-07-26 06:44:26] 2025-07-26 00:25:51,719 | INFO     | -- intersect: -5343941773.891709
[2025-07-26 06:44:26] 2025-07-26 00:25:51,719 | INFO     | intersect: -5343941773.891709
[2025-07-26 06:44:26] 2025-07-26 00:25:51,719 | INFO     | chi2: 0.0019512342580624768
[2025-07-26 06:44:26] 2025-07-26 00:25:51,719 | INFO     | -- intersect: -5343941773.891709
[2025-07-26 06:44:26] 2025-07-26 00:25:51,719 | INFO     | current memory leak: 3.05 B/s (using 230 data points, chi2=0.00)
[2025-07-26 06:44:26] 2025-07-26 00:25:51,720 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-26 06:44:26] 2025-07-26 00:25:51,720 | INFO     | ..............................
[2025-07-26 06:44:26] 2025-07-26 00:25:51,720 | INFO     | . Timing measurements:
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | . get job = 0 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | . initial setup = 2 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | . payload setup = 12 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | . stage-in = 0 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | . payload execution = 15904 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | . stage-out = 3 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | . log creation = 1 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,721 | INFO     | ..............................
[2025-07-26 06:44:26] 2025-07-26 00:25:51,867 | INFO     | 
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | job summary report
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | --------------------------------------------------
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | PanDA job id: 6744979025
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | task id: 45743349
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | errors: (none)
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | pilot state: finished 
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | transexitcode: 0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | exeerrorcode: 0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,868 | INFO     | exeerrordiag: 
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | exitcode: 0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | exitmsg: OK
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | cpuconsumptiontime: 61099 s
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | nevents: 400
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | neventsw: 0
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | pid: 10781
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | pgrp: 10781
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | corecount: 8
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | event service: False
[2025-07-26 06:44:26] 2025-07-26 00:25:51,869 | INFO     | sizes: {0: 2396645, 1: 2397501, 2: 2397501, 11: 2397791, 12: 2397819, 15921: 2428891, 15925: 2437945, 16019: 2438083}
[2025-07-26 06:44:26] 2025-07-26 00:25:51,870 | INFO     | --------------------------------------------------
[2025-07-26 06:44:26] 2025-07-26 00:25:51,870 | INFO     | 
[2025-07-26 06:44:26] 2025-07-26 00:25:51,870 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-26 06:44:26] 2025-07-26 00:25:52,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 06:44:26] 2025-07-26 00:25:52,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 06:44:26] 2025-07-26 00:25:52,379 | INFO     | job 6744979025 has completed (purged errors)
[2025-07-26 06:44:26] 2025-07-26 00:25:52,379 | INFO     | overall cleanup function is called
[2025-07-26 06:44:26] 2025-07-26 00:25:53,390 | INFO     | --- collectZombieJob: --- 10, [10781]
[2025-07-26 06:44:26] 2025-07-26 00:25:53,390 | INFO     | zombie collector waiting for pid 10781
[2025-07-26 06:44:26] 2025-07-26 00:25:53,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 06:44:26] 2025-07-26 00:25:53,390 | INFO     | collected zombie processes
[2025-07-26 06:44:26] 2025-07-26 00:25:53,391 | INFO     | will attempt to kill all subprocesses of pid=10781
[2025-07-26 06:44:26] 2025-07-26 00:25:53,503 | INFO     | process IDs to be killed: [10781] (in reverse order)
[2025-07-26 06:44:26] 2025-07-26 00:25:54,422 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 06:44:26] 2025-07-26 00:25:54,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 06:44:26] 2025-07-26 00:25:54,425 | INFO     | did not find any defunct processes belonging to 10781
[2025-07-26 06:44:26] 2025-07-26 00:25:54,428 | INFO     | did not find any defunct processes belonging to 10781
[2025-07-26 06:44:26] 2025-07-26 00:25:54,428 | INFO     | ready for new job
[2025-07-26 06:44:26] 2025-07-26 00:25:54,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 06:44:26] 2025-07-26 00:25:54,430 | INFO     | ***************************************
[2025-07-26 06:44:26] 2025-07-26 00:25:54,430 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 06:44:26] 2025-07-26 00:25:54,430 | INFO     | ***************************************
[2025-07-26 06:44:26] 2025-07-26 00:25:54,430 | INFO     | 
[2025-07-26 06:44:26] 2025-07-26 00:25:54,431 | INFO     | pilot is running in a VM
[2025-07-26 06:44:26] 2025-07-26 00:25:54,431 | INFO     | architecture information:
[2025-07-26 06:44:26] 2025-07-26 00:25:54,447 | INFO     | executing command: cat /etc/os-release
[2025-07-26 06:44:26] 2025-07-26 00:25:54,724 | INFO     | cat /etc/os-release:
[2025-07-26 06:44:26] NAME="CentOS Linux"
[2025-07-26 06:44:26] VERSION="7 (Core)"
[2025-07-26 06:44:26] ID="centos"
[2025-07-26 06:44:26] ID_LIKE="rhel fedora"
[2025-07-26 06:44:26] VERSION_ID="7"
[2025-07-26 06:44:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 06:44:26] ANSI_COLOR="0;31"
[2025-07-26 06:44:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 06:44:26] HOME_URL="https://www.centos.org/"
[2025-07-26 06:44:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 06:44:26] 
[2025-07-26 06:44:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 06:44:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 06:44:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 06:44:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 06:44:26] 
[2025-07-26 06:44:26] 2025-07-26 00:25:54,725 | INFO     | ***************************************
[2025-07-26 06:44:26] 2025-07-26 00:25:55,229 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-26 06:44:26] 2025-07-26 00:25:55,485 | INFO     | sufficient remaining disk space (496453550080 B)
[2025-07-26 06:44:26] 2025-07-26 00:25:55,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 06:44:26] 2025-07-26 00:25:55,485 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 06:44:26] 2025-07-26 00:25:55,486 | INFO     | update_server=False
[2025-07-26 06:44:26] 2025-07-26 00:25:55,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 06:44:26] 2025-07-26 00:25:55,663 | INFO     | all payload control threads have been joined
[2025-07-26 06:44:26] 2025-07-26 00:25:56,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 06:44:26] 2025-07-26 00:25:56,005 | INFO     | aborting loop
[2025-07-26 06:44:26] 2025-07-26 00:25:56,071 | INFO     | all data control threads have been joined
[2025-07-26 06:44:26] 2025-07-26 00:25:56,120 | INFO     | all job control threads have been joined
[2025-07-26 06:44:26] 2025-07-26 00:25:56,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 06:44:26] 2025-07-26 00:25:56,491 | INFO     | [job] retrieve thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:56,543 | INFO     | [job] validate thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:56,604 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:56,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:56,669 | INFO     | [payload] control thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:56,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 06:44:26] 2025-07-26 00:25:57,011 | INFO     | [job] job monitor thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,079 | INFO     | [data] control thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,126 | INFO     | [job] control thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,222 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,276 | INFO     | [payload] validate_post thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,600 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,784 | INFO     | [data] copytool_in thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,890 | INFO     | [job] queue monitor thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:57,968 | INFO     | [payload] failed_post thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:58,229 | INFO     | [data] copytool_out thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:25:58,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 06:44:26] 2025-07-26 00:26:02,884 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 06:44:26] 2025-07-26 00:26:04,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225445033792)>', '<ExcThread(monitor, started 140224692737792)>']
[2025-07-26 06:44:26] 2025-07-26 00:26:09,230 | INFO     | all workflow threads have been joined
[2025-07-26 06:44:26] 2025-07-26 00:26:09,230 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 06:44:26] 2025-07-26 00:26:09,231 | INFO     | traces error code: 0
[2025-07-26 06:44:26] 2025-07-26 00:26:09,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 06:44:26] 2025-07-26 00:26:24,903 | INFO     | PID=4220 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 06:44:26] 2025-07-26 00:26:24,904 | INFO     | .. there are 9 such processes running
[2025-07-26 06:44:26] 2025-07-26 00:26:24,906 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 06:44:26] 2025-07-26 00:26:24,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 06:44:26] 2025-07-26 00:26:24,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 06:44:26] 2025-07-26 00:26:24,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 06:44:26] 2025-07-26 00:26:24,906 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 06:44:26] 2025-07-26 00:26:24,906 | INFO     | [monitor] control thread has ended
[2025-07-26 06:44:26] 2025-07-26 00:26:25,152 [wrapper] ==== pilot stdout END ====
[2025-07-26 06:44:26] 2025-07-26 00:26:25,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 06:44:26] 2025-07-26 00:26:25,315 [wrapper] pilotpid: 4220
[2025-07-26 06:44:26] 2025-07-26 00:26:25,405 [wrapper] Pilot exit status: 0
[2025-07-26 06:44:26] 2025-07-26 00:26:25,764 [wrapper] pandaids: 6744979025
[2025-07-26 06:44:26] 2025-07-26 00:26:26,644 [wrapper] cleanup supervisor_pilot  3485 4221
[2025-07-26 06:44:26] 2025-07-26 00:26:26,754 [wrapper] Test setup, not cleaning
[2025-07-26 06:44:26] 2025-07-26 00:26:26,849 [wrapper] apfmon messages muted
[2025-07-26 06:44:26] 2025-07-26 00:26:26,914 [wrapper] ==== wrapper stdout END ====
[2025-07-26 06:44:26] 2025-07-26 00:26:26,980 [wrapper] ==== wrapper stderr END ====
[2025-07-26 06:44:26]  *** Error codes and diagnostics ***
[2025-07-26 06:44:26]     "exeErrorCode": 0,
[2025-07-26 06:44:26]     "exeErrorDiag": "",
[2025-07-26 06:44:26]     "pilotErrorCode": 0,
[2025-07-26 06:44:26]     "pilotErrorDiag": "",
[2025-07-26 06:44:26]  *** Listing of results directory ***
[2025-07-26 06:44:26] total 353924
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc    530466 Jul 25 11:16 pilot3.tar.gz
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc      5112 Jul 25 11:24 queuedata.json
[2025-07-26 06:44:26] -rwx------. 1 boinc boinc     36292 Jul 25 11:25 runpilot2-wrapper.sh
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc       100 Jul 25 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 06:44:26] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 21:58 run_atlas
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc       105 Jul 25 21:58 job.xml
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc      6391 Jul 25 21:58 init_data.xml
[2025-07-26 06:44:26] -rw-r--r--. 2 boinc boinc 146823785 Jul 25 21:58 EVNT.45743347._000993.pool.root.1
[2025-07-26 06:44:26] -rw-r--r--. 2 boinc boinc     15095 Jul 25 21:58 start_atlas.sh
[2025-07-26 06:44:26] drwxrwx--x. 2 boinc boinc        68 Jul 25 21:58 shared
[2025-07-26 06:44:26] -rw-r--r--. 2 boinc boinc    542899 Jul 25 21:58 input.tar.gz
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc         0 Jul 25 21:58 boinc_lockfile
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc      2562 Jul 25 21:58 pandaJob.out
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc    979993 Jul 25 21:58 agis_schedconf.cvmfs.json
[2025-07-26 06:44:26] drwx------. 4 boinc boinc      4096 Jul 25 21:58 pilot3
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc 208167395 Jul 26 02:22 HITS.45743349._019132.pool.root.1
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc       531 Jul 26 02:23 boinc_task_state.xml
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc      1020 Jul 26 02:24 memory_monitor_summary.json
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc   1593052 Jul 26 02:24 agis_ddmendpoints.agis.ALL.json
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc    405703 Jul 26 02:24 log.45743349._019132.job.log.tgz.1
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc      7780 Jul 26 02:25 heartbeat.json
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc        95 Jul 26 02:26 pilot_heartbeat.json
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc       889 Jul 26 02:26 pilotlog.txt
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc   1375831 Jul 26 02:26 log.45743349._019132.job.log.1
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc       357 Jul 26 02:26 output.list
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc       620 Jul 26 02:26 runtime_log
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc   1802240 Jul 26 02:26 result.tar.gz
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc      8660 Jul 26 02:26 runtime_log.err
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc       656 Jul 26 02:26 R3FODmWrTz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5kyKDmiJAwDn.diag
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc      8192 Jul 26 06:44 boinc_mmap_file
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc        28 Jul 26 06:44 wrapper_checkpoint.txt
[2025-07-26 06:44:26] -rw-r--r--. 1 boinc boinc     20564 Jul 26 06:44 stderr.txt
[2025-07-26 06:44:26] HITS file was successfully produced:
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc 208167395 Jul 26 02:22 shared/HITS.pool.root.1
[2025-07-26 06:44:26]  *** Contents of shared directory: ***
[2025-07-26 06:44:26] total 348984
[2025-07-26 06:44:26] -rw-r--r--. 2 boinc boinc 146823785 Jul 25 21:58 ATLAS.root_0
[2025-07-26 06:44:26] -rw-r--r--. 2 boinc boinc     15095 Jul 25 21:58 start_atlas.sh
[2025-07-26 06:44:26] -rw-r--r--. 2 boinc boinc    542899 Jul 25 21:58 input.tar.gz
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc 208167395 Jul 26 02:22 HITS.pool.root.1
[2025-07-26 06:44:26] -rw-------. 1 boinc boinc   1802240 Jul 26 02:26 result.tar.gz
06:44:28 (32603): run_atlas exited; CPU time 61299.518274
06:44:28 (32603): called boinc_finish(0)

</stderr_txt>
]]>

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