Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:08:09 (2157612): wrapper (7.7.26015): starting
03:08:09 (2157612): wrapper: running run_atlas (--nthreads 3)
[2025-07-26 03:08:09] Arguments: --nthreads 3
[2025-07-26 03:08:09] Threads: 3
[2025-07-26 03:08:09] Checking for CVMFS
[2025-07-26 03:08:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 03:08:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 03:08:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 03:08:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 03:08:10] 2.9.2.0 1603329 1947 79844 148758 3 57 35669440 36864001 0 130560 0 1477004 99.989 70800 3557 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 03:08:10] CVMFS is ok
[2025-07-26 03:08:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 03:08:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 03:08:10] Further information can be found at the LHC@home message board.
[2025-07-26 03:08:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 03:08:10] Checking for apptainer binary...
[2025-07-26 03:08:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 03:08:10] Running /usr/bin/apptainer --version
[2025-07-26 03:08:10] apptainer version 1.4.1-1.1
[2025-07-26 03:08:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 03:08:10] thA337a
[2025-07-26 03:08:10] apptainer works
[2025-07-26 03:08:10] Set ATHENA_PROC_NUMBER=3
[2025-07-26 03:08:10] Set ATHENA_CORE_NUMBER=3
[2025-07-26 03:08:10] Starting ATLAS job with PandaID=6744952948
[2025-07-26 03:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 04:41:03]  *** The last 200 lines of the pilot log: ***
[2025-07-26 04:41:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 04:41:03]  is_altstaged=None
[2025-07-26 04:41:03]  is_tar=False
[2025-07-26 04:41:03]  lfn=log.45743349._016723.job.log.tgz.1
[2025-07-26 04:41:03]  mtime=0
[2025-07-26 04:41:03]  protocol_id=None
[2025-07-26 04:41:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 04:41:03]  replicas=None
[2025-07-26 04:41:03]  scope=mc23_13p6TeV
[2025-07-26 04:41:03]  status=None
[2025-07-26 04:41:03]  status_code=0
[2025-07-26 04:41:03]  storage_token=
[2025-07-26 04:41:03]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744952948/log.45743349._016723.job.log.tgz.1
[2025-07-26 04:41:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/4d/log.45743349._016723.job.log.tgz.1
[2025-07-26 04:41:03]  workdir=None
[2025-07-26 04:41:03] ]
[2025-07-26 04:41:03] 2025-07-26 02:40:27,984 | INFO     | transferring file log.45743349._016723.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744952948/log.45743349._016723.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 04:41:03] 2025-07-26 02:40:27,984 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744952948/log.45743349._016723.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0167
[2025-07-26 04:41:03] 2025-07-26 02:40:27,997 | INFO     | adding to output.list: log.45743349._016723.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/4d/log.45743349._016723.job.log.tg
[2025-07-26 04:41:03] 2025-07-26 02:40:27,997 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 04:41:03] 2025-07-26 02:40:27,997 | INFO     | summary of transferred files:
[2025-07-26 04:41:03] 2025-07-26 02:40:27,997 | INFO     |  -- lfn=log.45743349._016723.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 04:41:03] 2025-07-26 02:40:27,998 | INFO     | stage-out finished correctly
[2025-07-26 04:41:03] 2025-07-26 02:40:28,027 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 04:41:03] 2025-07-26 02:40:29,110 | INFO     | job 6744952948 has state=finished
[2025-07-26 04:41:03] 2025-07-26 02:40:29,111 | INFO     | preparing for final server update for job 6744952948 in state='finished'
[2025-07-26 04:41:03] 2025-07-26 02:40:29,111 | INFO     | this job has now completed (state=finished)
[2025-07-26 04:41:03] 2025-07-26 02:40:29,111 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 04:41:03] 2025-07-26 02:40:29,111 | INFO     | log transfer has been attempted: DONE
[2025-07-26 04:41:03] 2025-07-26 02:40:29,111 | INFO     | job 6744952948 has finished - writing final server update
[2025-07-26 04:41:03] 2025-07-26 02:40:29,111 | INFO     | total number of processed events: 400 (read)
[2025-07-26 04:41:03] 2025-07-26 02:40:29,112 | INFO     | executing command: lscpu
[2025-07-26 04:41:03] 2025-07-26 02:40:29,128 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 04:41:03] 2025-07-26 02:40:30,388 | WARNING  | process 2167747 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 04:41:03] 2025-07-26 02:40:30,389 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744952948/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 04:41:03] 2025-07-26 02:40:30,424 | INFO     | number of running child processes to parent process 2167747: 1
[2025-07-26 04:41:03] 2025-07-26 02:40:30,424 | INFO     | maximum number of monitored processes: 6
[2025-07-26 04:41:03] 2025-07-26 02:40:31,475 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 04:41:03] 2025-07-26 02:40:31,476 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3661.1692499999995
[2025-07-26 04:41:03] 2025-07-26 02:40:31,477 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744952948/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 04:41:03] 2025-07-26 02:40:31,477 | INFO     | extracted standard info from prmon json
[2025-07-26 04:41:03] 2025-07-26 02:40:31,477 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 04:41:03] 2025-07-26 02:40:31,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 04:41:03] 2025-07-26 02:40:31,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 04:41:03] 2025-07-26 02:40:31,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 04:41:03] 2025-07-26 02:40:31,478 | INFO     | fitting pss+swap vs Time
[2025-07-26 04:41:03] 2025-07-26 02:40:31,478 | INFO     | sum of square deviations: 183761585.0
[2025-07-26 04:41:03] 2025-07-26 02:40:31,478 | INFO     | sum of deviations: -2326437763.9999995
[2025-07-26 04:41:03] 2025-07-26 02:40:31,478 | INFO     | mean x: 1753494952.5
[2025-07-26 04:41:03] 2025-07-26 02:40:31,478 | INFO     | mean y: 2379607.0476190476
[2025-07-26 04:41:03] 2025-07-26 02:40:31,478 | INFO     | -- intersect: 22201779315.53068
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | intersect: 22201779315.53068
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | chi2: 0.05844870678087647
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | -- intersect: 22201779315.53068
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | current memory leak: -12.66 B/s (using 84 data points, chi2=0.06)
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | could have reported an average CPU frequency of 3960 MHz (7 samples)
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | ..............................
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . Timing measurements:
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . get job = 0 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . initial setup = 1 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . payload setup = 3 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . stage-in = 0 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . payload execution = 5511 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . stage-out = 0 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | . log creation = 0 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,479 | INFO     | ..............................
[2025-07-26 04:41:03] 2025-07-26 02:40:31,509 | INFO     | 
[2025-07-26 04:41:03] 2025-07-26 02:40:31,509 | INFO     | job summary report
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | --------------------------------------------------
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | PanDA job id: 6744952948
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | task id: 45743349
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | errors: (none)
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | pilot state: finished 
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | transexitcode: 0
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | exeerrorcode: 0
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | exeerrordiag: 
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | exitcode: 0
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | exitmsg: OK
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | cpuconsumptiontime: 15896 s
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | nevents: 400
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | neventsw: 0
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | pid: 2167747
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | pgrp: 2167747
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | corecount: 3
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | event service: False
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | sizes: {0: 2397423, 2: 2397685, 10: 2397713, 5518: 2424489, 5519: 2433549, 5522: 2433687}
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | --------------------------------------------------
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | 
[2025-07-26 04:41:03] 2025-07-26 02:40:31,510 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 04:41:03] 2025-07-26 02:40:31,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 04:41:03] 2025-07-26 02:40:31,523 | INFO     | job 6744952948 has completed (purged errors)
[2025-07-26 04:41:03] 2025-07-26 02:40:31,523 | INFO     | overall cleanup function is called
[2025-07-26 04:41:03] 2025-07-26 02:40:32,529 | INFO     | --- collectZombieJob: --- 10, [2167747]
[2025-07-26 04:41:03] 2025-07-26 02:40:32,530 | INFO     | zombie collector waiting for pid 2167747
[2025-07-26 04:41:03] 2025-07-26 02:40:32,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 04:41:03] 2025-07-26 02:40:32,530 | INFO     | collected zombie processes
[2025-07-26 04:41:03] 2025-07-26 02:40:32,530 | INFO     | will attempt to kill all subprocesses of pid=2167747
[2025-07-26 04:41:03] 2025-07-26 02:40:32,569 | INFO     | process IDs to be killed: [2167747] (in reverse order)
[2025-07-26 04:41:03] 2025-07-26 02:40:32,593 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 04:41:03] 2025-07-26 02:40:32,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 04:41:03] 2025-07-26 02:40:32,594 | INFO     | did not find any defunct processes belonging to 2167747
[2025-07-26 04:41:03] 2025-07-26 02:40:32,595 | INFO     | did not find any defunct processes belonging to 2167747
[2025-07-26 04:41:03] 2025-07-26 02:40:32,595 | INFO     | ready for new job
[2025-07-26 04:41:03] 2025-07-26 02:40:32,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 04:41:03] 2025-07-26 02:40:32,595 | INFO     | ***************************************
[2025-07-26 04:41:03] 2025-07-26 02:40:32,595 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 04:41:03] 2025-07-26 02:40:32,596 | INFO     | ***************************************
[2025-07-26 04:41:03] 2025-07-26 02:40:32,596 | INFO     | 
[2025-07-26 04:41:03] 2025-07-26 02:40:32,596 | INFO     | architecture information:
[2025-07-26 04:41:03] 2025-07-26 02:40:32,596 | INFO     | executing command: cat /etc/os-release
[2025-07-26 04:41:03] 2025-07-26 02:40:32,605 | INFO     | cat /etc/os-release:
[2025-07-26 04:41:03] NAME="CentOS Linux"
[2025-07-26 04:41:03] VERSION="7 (Core)"
[2025-07-26 04:41:03] ID="centos"
[2025-07-26 04:41:03] ID_LIKE="rhel fedora"
[2025-07-26 04:41:03] VERSION_ID="7"
[2025-07-26 04:41:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 04:41:03] ANSI_COLOR="0;31"
[2025-07-26 04:41:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 04:41:03] HOME_URL="https://www.centos.org/"
[2025-07-26 04:41:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 04:41:03] 
[2025-07-26 04:41:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 04:41:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 04:41:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 04:41:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 04:41:03] 
[2025-07-26 04:41:03] 2025-07-26 02:40:32,605 | INFO     | ***************************************
[2025-07-26 04:41:03] 2025-07-26 02:40:33,109 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 04:41:03] 2025-07-26 02:40:33,122 | INFO     | sufficient remaining disk space (364598263808 B)
[2025-07-26 04:41:03] 2025-07-26 02:40:33,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 04:41:03] 2025-07-26 02:40:33,122 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 04:41:03] 2025-07-26 02:40:33,122 | INFO     | update_server=False
[2025-07-26 04:41:03] 2025-07-26 02:40:33,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 04:41:03] 2025-07-26 02:40:33,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 04:41:03] 2025-07-26 02:40:33,281 | INFO     | all payload control threads have been joined
[2025-07-26 04:41:03] 2025-07-26 02:40:33,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 04:41:03] 2025-07-26 02:40:33,863 | INFO     | all job control threads have been joined
[2025-07-26 04:41:03] 2025-07-26 02:40:33,900 | INFO     | all data control threads have been joined
[2025-07-26 04:41:03] 2025-07-26 02:40:33,925 | INFO     | job.realtimelogging is not enabled
[2025-07-26 04:41:03] 2025-07-26 02:40:33,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 04:41:03] 2025-07-26 02:40:33,933 | INFO     | aborting loop
[2025-07-26 04:41:03] 2025-07-26 02:40:34,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 04:41:03] 2025-07-26 02:40:34,128 | INFO     | [job] retrieve thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,128 | INFO     | [job] queue monitor thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,138 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,287 | INFO     | [payload] control thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,569 | INFO     | [payload] validate_post thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,869 | INFO     | [job] control thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,906 | INFO     | [data] control thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,938 | INFO     | [job] job monitor thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:34,981 | INFO     | [payload] failed_post thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:35,008 | INFO     | [data] copytool_in thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:35,367 | INFO     | [job] validate thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:35,437 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:35,528 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:35,543 | INFO     | [data] copytool_out thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:38,068 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 04:41:03] 2025-07-26 02:40:39,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949635635008)>', '<ExcThread(monitor, started 139949135349504)>']
[2025-07-26 04:41:03] 2025-07-26 02:40:44,296 | INFO     | all workflow threads have been joined
[2025-07-26 04:41:03] 2025-07-26 02:40:44,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 04:41:03] 2025-07-26 02:40:44,297 | INFO     | traces error code: 0
[2025-07-26 04:41:03] 2025-07-26 02:40:44,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 04:41:03] 2025-07-26 02:41:03,820 | INFO     | PID=2161252 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 04:41:03] 2025-07-26 02:41:03,820 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 04:41:03] 2025-07-26 02:41:03,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 04:41:03] 2025-07-26 02:41:03,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 04:41:03] 2025-07-26 02:41:03,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 04:41:03] 2025-07-26 02:41:03,820 | INFO     | [monitor] control thread has ended
[2025-07-26 04:41:03] 2025-07-26 02:41:03,866 [wrapper] ==== pilot stdout END ====
[2025-07-26 04:41:03] 2025-07-26 02:41:03,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 04:41:03] 2025-07-26 02:41:03,871 [wrapper] pilotpid: 2161252
[2025-07-26 04:41:03] 2025-07-26 02:41:03,873 [wrapper] Pilot exit status: 0
[2025-07-26 04:41:03] 2025-07-26 02:41:03,880 [wrapper] pandaids: 6744952948
[2025-07-26 04:41:03] 2025-07-26 02:41:03,896 [wrapper] cleanup supervisor_pilot 2180417 2161253
[2025-07-26 04:41:03] 2025-07-26 02:41:03,899 [wrapper] Test setup, not cleaning
[2025-07-26 04:41:03] 2025-07-26 02:41:03,901 [wrapper] apfmon messages muted
[2025-07-26 04:41:03] 2025-07-26 02:41:03,904 [wrapper] ==== wrapper stdout END ====
[2025-07-26 04:41:03] 2025-07-26 02:41:03,906 [wrapper] ==== wrapper stderr END ====
[2025-07-26 04:41:03]  *** Error codes and diagnostics ***
[2025-07-26 04:41:03]     "exeErrorCode": 0,
[2025-07-26 04:41:03]     "exeErrorDiag": "",
[2025-07-26 04:41:03]     "pilotErrorCode": 0,
[2025-07-26 04:41:03]     "pilotErrorDiag": "",
[2025-07-26 04:41:03]  *** Listing of results directory ***
[2025-07-26 04:41:03] total 354728
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc    530466 Jul 25 07:31 pilot3.tar.gz
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc      5112 Jul 25 07:41 queuedata.json
[2025-07-26 04:41:03] -rwx------ 1 boinc boinc     36292 Jul 25 07:42 runpilot2-wrapper.sh
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc       100 Jul 26 03:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 04:41:03] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 03:08 run_atlas
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc       105 Jul 26 03:08 job.xml
[2025-07-26 04:41:03] -rw-r--r-- 2 boinc boinc 141547650 Jul 26 03:08 EVNT.45743347._000942.pool.root.1
[2025-07-26 04:41:03] -rw-r--r-- 2 boinc boinc    542890 Jul 26 03:08 input.tar.gz
[2025-07-26 04:41:03] -rw-r--r-- 2 boinc boinc     15095 Jul 26 03:08 start_atlas.sh
[2025-07-26 04:41:03] drwxrwx--x 2 boinc boinc      4096 Jul 26 03:08 shared
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc         0 Jul 26 03:08 boinc_setup_complete
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc      6449 Jul 26 03:08 init_data.xml
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc         0 Jul 26 03:08 boinc_lockfile
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc      2560 Jul 26 03:08 pandaJob.out
[2025-07-26 04:41:03] -rw------- 1 boinc boinc    979993 Jul 26 03:08 agis_schedconf.cvmfs.json
[2025-07-26 04:41:03] -rw------- 1 boinc boinc   1593052 Jul 26 03:08 agis_ddmendpoints.agis.ALL.json
[2025-07-26 04:41:03] drwx------ 4 boinc boinc      4096 Jul 26 03:08 pilot3
[2025-07-26 04:41:03] -rw------- 1 boinc boinc 216298627 Jul 26 04:40 HITS.45743349._016723.pool.root.1
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc       529 Jul 26 04:40 boinc_task_state.xml
[2025-07-26 04:41:03] -rw------- 1 boinc boinc      1017 Jul 26 04:40 memory_monitor_summary.json
[2025-07-26 04:41:03] -rw------- 1 boinc boinc    225124 Jul 26 04:40 log.45743349._016723.job.log.tgz.1
[2025-07-26 04:41:03] -rw------- 1 boinc boinc      7742 Jul 26 04:40 heartbeat.json
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc        27 Jul 26 04:40 wrapper_checkpoint.txt
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc      8192 Jul 26 04:40 boinc_mmap_file
[2025-07-26 04:41:03] -rw------- 1 boinc boinc       747 Jul 26 04:41 pilotlog.txt
[2025-07-26 04:41:03] -rw------- 1 boinc boinc        95 Jul 26 04:41 pilot_heartbeat.json
[2025-07-26 04:41:03] -rw------- 1 boinc boinc    535803 Jul 26 04:41 log.45743349._016723.job.log.1
[2025-07-26 04:41:03] -rw------- 1 boinc boinc       357 Jul 26 04:41 output.list
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc       620 Jul 26 04:41 runtime_log
[2025-07-26 04:41:03] -rw------- 1 boinc boinc    778240 Jul 26 04:41 result.tar.gz
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc      8739 Jul 26 04:41 runtime_log.err
[2025-07-26 04:41:03] -rw------- 1 boinc boinc       659 Jul 26 04:41 RRWMDmSNQz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMWyKDmHbMDpn.diag
[2025-07-26 04:41:03] -rw-r--r-- 1 boinc boinc     21430 Jul 26 04:41 stderr.txt
[2025-07-26 04:41:03] HITS file was successfully produced:
[2025-07-26 04:41:03] -rw------- 1 boinc boinc 216298627 Jul 26 04:40 shared/HITS.pool.root.1
[2025-07-26 04:41:03]  *** Contents of shared directory: ***
[2025-07-26 04:41:03] total 350780
[2025-07-26 04:41:03] -rw-r--r-- 2 boinc boinc 141547650 Jul 26 03:08 ATLAS.root_0
[2025-07-26 04:41:03] -rw-r--r-- 2 boinc boinc    542890 Jul 26 03:08 input.tar.gz
[2025-07-26 04:41:03] -rw-r--r-- 2 boinc boinc     15095 Jul 26 03:08 start_atlas.sh
[2025-07-26 04:41:03] -rw------- 1 boinc boinc 216298627 Jul 26 04:40 HITS.pool.root.1
[2025-07-26 04:41:03] -rw------- 1 boinc boinc    778240 Jul 26 04:41 result.tar.gz
04:41:05 (2157612): run_atlas exited; CPU time 15911.809682
04:41:05 (2157612): called boinc_finish(0)

</stderr_txt>
]]>

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