Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:45:45 (2968835): wrapper (7.7.26015): starting
20:45:45 (2968835): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 20:45:45] Arguments: --nthreads 12
[2025-07-25 20:45:45] Threads: 12
[2025-07-25 20:45:45] Checking for CVMFS
[2025-07-25 20:45:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:45:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:45:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:45:48] 2.13.1.0 3617 731 123684 148750 1 198 38177078 46080000 42074 130560 0 5337176 99.974 635082 27241 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-25 20:45:48] CVMFS is ok
[2025-07-25 20:45:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:45:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:45:48] Further information can be found at the LHC@home message board.
[2025-07-25 20:45:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:45:48] Checking for apptainer binary...
[2025-07-25 20:45:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:45:48] Running /usr/bin/apptainer --version
[2025-07-25 20:45:48] apptainer version 1.4.1-1.el9
[2025-07-25 20:45:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:45:49] mff2101.farm.particle.cz
[2025-07-25 20:45:49] apptainer works
[2025-07-25 20:45:49] Set ATHENA_PROC_NUMBER=12
[2025-07-25 20:45:49] Set ATHENA_CORE_NUMBER=12
[2025-07-25 20:45:49] Starting ATLAS job with PandaID=6744944505
[2025-07-25 20:45:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 23:45:53]  *** The last 200 lines of the pilot log: ***
[2025-07-25 23:45:53] 2025-07-25 21:12:27,228 | INFO     | intersect: -179447042822.9979
[2025-07-25 23:45:53] 2025-07-25 21:12:27,228 | INFO     | chi2: 7.5409678874604875
[2025-07-25 23:45:53] 2025-07-25 21:12:27,228 | INFO     | sum of square deviations: 746051197.5
[2025-07-25 23:45:53] 2025-07-25 21:12:27,229 | INFO     | sum of deviations: 91438049071.0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,229 | INFO     | mean x: 1753473489.5
[2025-07-25 23:45:53] 2025-07-25 21:12:27,229 | INFO     | mean y: 2510423.6119402987
[2025-07-25 23:45:53] 2025-07-25 21:12:27,229 | INFO     | -- intersect: -214907934750.76044
[2025-07-25 23:45:53] 2025-07-25 21:12:27,230 | INFO     | intersect: -214907934750.76044
[2025-07-25 23:45:53] 2025-07-25 21:12:27,230 | INFO     | chi2: 6.793365176619263
[2025-07-25 23:45:53] 2025-07-25 21:12:27,230 | INFO     | current chi2=6.793365176619263 (change=9.913882700447209 %)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,230 | INFO     | right removable region: 133
[2025-07-25 23:45:53] 2025-07-25 21:12:27,230 | INFO     | sum of square deviations: 746051197.5
[2025-07-25 23:45:53] 2025-07-25 21:12:27,231 | INFO     | sum of deviations: 35779521482.49997
[2025-07-25 23:45:53] 2025-07-25 21:12:27,231 | INFO     | mean x: 1753473794.5
[2025-07-25 23:45:53] 2025-07-25 21:12:27,231 | INFO     | mean y: 2586920.425373134
[2025-07-25 23:45:53] 2025-07-25 21:12:27,231 | INFO     | -- intersect: -84091445110.55128
[2025-07-25 23:45:53] 2025-07-25 21:12:27,231 | INFO     | intersect: -84091445110.55128
[2025-07-25 23:45:53] 2025-07-25 21:12:27,232 | INFO     | chi2: 2.5688991617758203
[2025-07-25 23:45:53] 2025-07-25 21:12:27,232 | INFO     | current chi2=2.5688991617758203 (change=65.93409227948685 %)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,232 | INFO     | sum of square deviations: 665612480.0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,232 | INFO     | sum of deviations: 8025777807.999998
[2025-07-25 23:45:53] 2025-07-25 21:12:27,233 | INFO     | mean x: 1753473947.0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,233 | INFO     | mean y: 2639194.5581395347
[2025-07-25 23:45:53] 2025-07-25 21:12:27,233 | INFO     | -- intersect: -21140282120.166557
[2025-07-25 23:45:53] 2025-07-25 21:12:27,233 | INFO     | intersect: -21140282120.166557
[2025-07-25 23:45:53] 2025-07-25 21:12:27,233 | INFO     | chi2: 1.0731066458090344
[2025-07-25 23:45:53] 2025-07-25 21:12:27,233 | INFO     | current chi2=1.0731066458090344 (change=58.22698446959589 %)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,233 | INFO     | sum of square deviations: 591173875.0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,234 | INFO     | sum of deviations: -2272556708.000001
[2025-07-25 23:45:53] 2025-07-25 21:12:27,234 | INFO     | mean x: 1753474099.5
[2025-07-25 23:45:53] 2025-07-25 21:12:27,234 | INFO     | mean y: 2660214.0322580645
[2025-07-25 23:45:53] 2025-07-25 21:12:27,234 | INFO     | -- intersect: 6743264790.178296
[2025-07-25 23:45:53] 2025-07-25 21:12:27,234 | INFO     | intersect: 6743264790.178296
[2025-07-25 23:45:53] 2025-07-25 21:12:27,234 | INFO     | chi2: 0.8891602945415576
[2025-07-25 23:45:53] 2025-07-25 21:12:27,235 | INFO     | current chi2=0.8891602945415576 (change=17.141479086526044 %)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,235 | INFO     | left removable region: 30
[2025-07-25 23:45:53] 2025-07-25 21:12:27,235 | INFO     | sum of square deviations: 338804492.0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,235 | INFO     | sum of deviations: 2216774281.9999995
[2025-07-25 23:45:53] 2025-07-25 21:12:27,235 | INFO     | mean x: 1753474374.0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,235 | INFO     | mean y: 2688233.873786408
[2025-07-25 23:45:53] 2025-07-25 21:12:27,236 | INFO     | -- intersect: -11470172924.145477
[2025-07-25 23:45:53] 2025-07-25 21:12:27,236 | INFO     | intersect: -11470172924.145477
[2025-07-25 23:45:53] 2025-07-25 21:12:27,236 | INFO     | chi2: 0.0004437591201452536
[2025-07-25 23:45:53] 2025-07-25 21:12:27,236 | INFO     | -- intersect: -11470172924.145477
[2025-07-25 23:45:53] 2025-07-25 21:12:27,236 | INFO     | current memory leak: 6.54 B/s (using 103 data points, chi2=0.00)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | could have reported an average CPU frequency of 2758 MHz (8 samples)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | ..............................
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . Timing measurements:
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . get job = 0 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . initial setup = 4 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . payload setup = 92 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . stage-in = 0 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . payload execution = 8496 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . stage-out = 1 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,237 | INFO     | . log creation = 0 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,238 | INFO     | ..............................
[2025-07-25 23:45:53] 2025-07-25 21:12:27,346 | INFO     | 
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | job summary report
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | --------------------------------------------------
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | PanDA job id: 6744944505
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | task id: 45743349
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | errors: (none)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | pilot state: finished 
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | transexitcode: 0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | exeerrorcode: 0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | exeerrordiag: 
[2025-07-25 23:45:53] 2025-07-25 21:12:27,347 | INFO     | exitcode: 0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | exitmsg: OK
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | cpuconsumptiontime: 44054 s
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | nevents: 400
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | neventsw: 0
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | pid: 2986362
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | pgrp: 2986362
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | corecount: 12
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | event service: False
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | sizes: {0: 2396645, 1: 2397331, 2: 2397530, 13: 2397530, 23: 2397586, 34: 2397614, 39: 2398032, 45: 2398060, 8590: 2426308, 8592: 2435364, 8645: 2435502}
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | --------------------------------------------------
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | 
[2025-07-25 23:45:53] 2025-07-25 21:12:27,348 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-07-25 23:45:53] 2025-07-25 21:12:27,356 | INFO     | sufficient remaining disk space (1656314920960 B)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,357 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,358 | INFO     | size of work directory /scratch/.boinc/slots/5/PanDA_Pilot-6744944505: 4319500 B (within 2537553920 B limit)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,358 | INFO     | pfn file=/scratch/.boinc/slots/5/PanDA_Pilot-6744944505/HITS.45743349._013591.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,358 | INFO     | total size of present files: 0 B (workdir size: 4319500 B)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,359 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/5/PanDA_Pilot-6744944505/HITS.45743349._013591.pool.root.1 since it does not exist
[2025-07-25 23:45:53] 2025-07-25 21:12:27,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,623 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,626 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,654 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,656 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 23:45:53] 2025-07-25 21:12:27,656 | INFO     | job 6744944505 has completed (purged errors)
[2025-07-25 23:45:53] 2025-07-25 21:12:27,656 | INFO     | overall cleanup function is called
[2025-07-25 23:45:53] 2025-07-25 21:12:28,037 | INFO     | number of running child processes to parent process 2986362: 1
[2025-07-25 23:45:53] 2025-07-25 21:12:28,037 | INFO     | maximum number of monitored processes: 8
[2025-07-25 23:45:53] 2025-07-25 21:12:28,037 | INFO     | aborting job monitoring since job object (job id=6744944505) has expired
[2025-07-25 23:45:53] 2025-07-25 21:12:28,792 | INFO     | --- collectZombieJob: --- 10, [2986362]
[2025-07-25 23:45:53] 2025-07-25 21:12:28,792 | INFO     | zombie collector waiting for pid 2986362
[2025-07-25 23:45:53] 2025-07-25 21:12:28,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 23:45:53] 2025-07-25 21:12:28,793 | INFO     | collected zombie processes
[2025-07-25 23:45:53] 2025-07-25 21:12:28,793 | INFO     | will attempt to kill all subprocesses of pid=2986362
[2025-07-25 23:45:53] 2025-07-25 21:12:29,744 | INFO     | process IDs to be killed: [2986362] (in reverse order)
[2025-07-25 23:45:53] 2025-07-25 21:12:30,264 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 23:45:53] 2025-07-25 21:12:30,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 23:45:53] 2025-07-25 21:12:30,291 | INFO     | did not find any defunct processes belonging to 2986362
[2025-07-25 23:45:53] 2025-07-25 21:12:30,322 | INFO     | did not find any defunct processes belonging to 2986362
[2025-07-25 23:45:53] 2025-07-25 21:12:30,322 | INFO     | ready for new job
[2025-07-25 23:45:53] 2025-07-25 21:12:30,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 23:45:53] 2025-07-25 21:12:30,327 | INFO     | ***************************************
[2025-07-25 23:45:53] 2025-07-25 21:12:30,327 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 23:45:53] 2025-07-25 21:12:30,327 | INFO     | ***************************************
[2025-07-25 23:45:53] 2025-07-25 21:12:30,327 | INFO     | 
[2025-07-25 23:45:53] 2025-07-25 21:12:30,340 | INFO     | architecture information:
[2025-07-25 23:45:53] 2025-07-25 21:12:30,346 | INFO     | executing command: cat /etc/os-release
[2025-07-25 23:45:53] 2025-07-25 21:12:30,501 | INFO     | cat /etc/os-release:
[2025-07-25 23:45:53] NAME="CentOS Linux"
[2025-07-25 23:45:53] VERSION="7 (Core)"
[2025-07-25 23:45:53] ID="centos"
[2025-07-25 23:45:53] ID_LIKE="rhel fedora"
[2025-07-25 23:45:53] VERSION_ID="7"
[2025-07-25 23:45:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 23:45:53] ANSI_COLOR="0;31"
[2025-07-25 23:45:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 23:45:53] HOME_URL="https://www.centos.org/"
[2025-07-25 23:45:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 23:45:53] 
[2025-07-25 23:45:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 23:45:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 23:45:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 23:45:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 23:45:53] 
[2025-07-25 23:45:53] 2025-07-25 21:12:30,502 | INFO     | ***************************************
[2025-07-25 23:45:53] 2025-07-25 21:12:31,005 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-07-25 23:45:53] 2025-07-25 21:12:31,147 | INFO     | sufficient remaining disk space (1656319115264 B)
[2025-07-25 23:45:53] 2025-07-25 21:12:31,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 23:45:53] 2025-07-25 21:12:31,147 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 23:45:53] 2025-07-25 21:12:31,147 | INFO     | update_server=False
[2025-07-25 23:45:53] 2025-07-25 21:12:31,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 23:45:53] 2025-07-25 21:12:31,503 | INFO     | all job control threads have been joined
[2025-07-25 23:45:53] 2025-07-25 21:12:31,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:45:53] 2025-07-25 21:12:31,550 | INFO     | aborting loop
[2025-07-25 23:45:53] 2025-07-25 21:12:31,767 | INFO     | all data control threads have been joined
[2025-07-25 23:45:53] 2025-07-25 21:12:32,153 | INFO     | [job] retrieve thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:32,226 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:32,321 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 23:45:53] 2025-07-25 21:12:32,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:45:53] 2025-07-25 21:12:32,509 | INFO     | [job] control thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:32,555 | INFO     | [job] job monitor thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:32,620 | INFO     | [payload] validate_post thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:32,623 | INFO     | all payload control threads have been joined
[2025-07-25 23:45:53] 2025-07-25 21:12:32,772 | INFO     | [data] control thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:32,893 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:33,229 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:33,370 | INFO     | [job] queue monitor thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:33,426 | INFO     | [payload] failed_post thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:33,521 | INFO     | [job] validate thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:33,572 | INFO     | [data] copytool_in thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:33,629 | INFO     | [payload] control thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:34,328 | INFO     | [data] copytool_out thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:34,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 23:45:53] 2025-07-25 21:12:38,403 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:41,562 | INFO     | job.realtimelogging is not enabled
[2025-07-25 23:45:53] 2025-07-25 21:12:42,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 23:45:53] 2025-07-25 21:12:43,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260878075712)>', '<ExcThread(monitor, started 140259924891392)>']
[2025-07-25 23:45:53] 2025-07-25 21:12:48,898 | INFO     | all workflow threads have been joined
[2025-07-25 23:45:53] 2025-07-25 21:12:48,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 23:45:53] 2025-07-25 21:12:48,899 | INFO     | traces error code: 0
[2025-07-25 23:45:53] 2025-07-25 21:12:48,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 23:45:53] 2025-07-25 21:13:00,845 | INFO     | PID=2978395 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 23:45:53] 2025-07-25 21:13:00,847 | INFO     | .. there are 72 such processes running
[2025-07-25 23:45:53] 2025-07-25 21:13:00,848 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 23:45:53] 2025-07-25 21:13:00,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 23:45:53] 2025-07-25 21:13:00,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 23:45:53] 2025-07-25 21:13:00,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 23:45:53] 2025-07-25 21:13:00,848 | INFO     | [monitor] control thread has ended
[2025-07-25 23:45:53] 2025-07-25 21:13:01,221 [wrapper] ==== pilot stdout END ====
[2025-07-25 23:45:53] 2025-07-25 21:13:01,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 23:45:53] 2025-07-25 21:13:01,300 [wrapper] pilotpid: 2978395
[2025-07-25 23:45:53] 2025-07-25 21:13:01,333 [wrapper] Pilot exit status: 0
[2025-07-25 23:45:53] 2025-07-25 21:13:01,497 [wrapper] pandaids: 6744944505
[2025-07-25 23:45:53] 2025-07-25 21:13:01,870 [wrapper] cleanup supervisor_pilot 3333400 2978396
[2025-07-25 23:45:53] 2025-07-25 21:13:01,901 [wrapper] Test setup, not cleaning
[2025-07-25 23:45:53] 2025-07-25 21:13:01,940 [wrapper] apfmon messages muted
[2025-07-25 23:45:53] 2025-07-25 21:13:01,977 [wrapper] ==== wrapper stdout END ====
[2025-07-25 23:45:53] 2025-07-25 21:13:02,018 [wrapper] ==== wrapper stderr END ====
[2025-07-25 23:45:53]  *** Error codes and diagnostics ***
[2025-07-25 23:45:53]     "exeErrorCode": 0,
[2025-07-25 23:45:53]     "exeErrorDiag": "",
[2025-07-25 23:45:53]     "pilotErrorCode": 0,
[2025-07-25 23:45:53]     "pilotErrorDiag": "",
[2025-07-25 23:45:53]  *** Listing of results directory ***
[2025-07-25 23:45:53] total 350072
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc      5112 Jul 25 02:39 queuedata.json
[2025-07-25 23:45:53] -rwx------ 1 boinc boinc     36292 Jul 25 02:40 runpilot2-wrapper.sh
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc    530466 Jul 25 02:40 pilot3.tar.gz
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc       100 Jul 25 20:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 23:45:53] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 20:45 run_atlas
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc       105 Jul 25 20:45 job.xml
[2025-07-25 23:45:53] -rw-r--r-- 2 boinc boinc 147950817 Jul 25 20:45 EVNT.45743347._000741.pool.root.1
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc      6664 Jul 25 20:45 init_data.xml
[2025-07-25 23:45:53] -rw-r--r-- 2 boinc boinc     15095 Jul 25 20:45 start_atlas.sh
[2025-07-25 23:45:53] drwxrwx--x 2 boinc boinc      4096 Jul 25 20:45 shared
[2025-07-25 23:45:53] -rw-r--r-- 2 boinc boinc    542885 Jul 25 20:45 input.tar.gz
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc         0 Jul 25 20:45 boinc_lockfile
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc      2562 Jul 25 20:45 pandaJob.out
[2025-07-25 23:45:53] -rw------- 1 boinc boinc    979993 Jul 25 20:46 agis_schedconf.cvmfs.json
[2025-07-25 23:45:53] -rw------- 1 boinc boinc   1593052 Jul 25 20:46 agis_ddmendpoints.agis.ALL.json
[2025-07-25 23:45:53] drwx------ 4 boinc boinc      4096 Jul 25 20:46 pilot3
[2025-07-25 23:45:53] -rw------- 1 boinc boinc 204308524 Jul 25 23:10 HITS.45743349._013591.pool.root.1
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc       529 Jul 25 23:10 boinc_task_state.xml
[2025-07-25 23:45:53] -rw------- 1 boinc boinc      1020 Jul 25 23:11 memory_monitor_summary.json
[2025-07-25 23:45:53] -rw------- 1 boinc boinc    397102 Jul 25 23:11 log.45743349._013591.job.log.tgz.1
[2025-07-25 23:45:53] -rw------- 1 boinc boinc      7776 Jul 25 23:12 heartbeat.json
[2025-07-25 23:45:53] -rw------- 1 boinc boinc        95 Jul 25 23:13 pilot_heartbeat.json
[2025-07-25 23:45:53] -rw------- 1 boinc boinc       823 Jul 25 23:13 pilotlog.txt
[2025-07-25 23:45:53] -rw------- 1 boinc boinc    773442 Jul 25 23:13 log.45743349._013591.job.log.1
[2025-07-25 23:45:53] -rw------- 1 boinc boinc       357 Jul 25 23:13 output.list
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc       620 Jul 25 23:13 runtime_log
[2025-07-25 23:45:53] -rw------- 1 boinc boinc   1187840 Jul 25 23:13 result.tar.gz
[2025-07-25 23:45:53] -rw------- 1 boinc boinc       664 Jul 25 23:13 tlqLDmveLz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9JOLDm2UEcam.diag
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc      8721 Jul 25 23:13 runtime_log.err
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc        26 Jul 25 23:45 wrapper_checkpoint.txt
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc      8192 Jul 25 23:45 boinc_mmap_file
[2025-07-25 23:45:53] -rw-r--r-- 1 boinc boinc     21427 Jul 25 23:45 stderr.txt
[2025-07-25 23:45:53] HITS file was successfully produced:
[2025-07-25 23:45:53] -rw------- 1 boinc boinc 204308524 Jul 25 23:10 shared/HITS.pool.root.1
[2025-07-25 23:45:53]  *** Contents of shared directory: ***
[2025-07-25 23:45:53] total 345724
[2025-07-25 23:45:53] -rw-r--r-- 2 boinc boinc 147950817 Jul 25 20:45 ATLAS.root_0
[2025-07-25 23:45:53] -rw-r--r-- 2 boinc boinc     15095 Jul 25 20:45 start_atlas.sh
[2025-07-25 23:45:53] -rw-r--r-- 2 boinc boinc    542885 Jul 25 20:45 input.tar.gz
[2025-07-25 23:45:53] -rw------- 1 boinc boinc 204308524 Jul 25 23:10 HITS.pool.root.1
[2025-07-25 23:45:53] -rw------- 1 boinc boinc   1187840 Jul 25 23:13 result.tar.gz
23:45:55 (2968835): run_atlas exited; CPU time 44499.946650
23:45:55 (2968835): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN