Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:43:26 (729602): wrapper (7.7.26015): starting
07:43:26 (729602): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 07:43:26] Arguments: --nthreads 12
[2025-07-26 07:43:26] Threads: 12
[2025-07-26 07:43:26] Checking for CVMFS
[2025-07-26 07:43:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 07:43:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 07:43:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 07:43:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 07:43:26] 2.13.1.0 4489 31257 101632 148765 3 57 41441793 46080001 922 130560 0 21081413 99.993 964312 22553 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-26 07:43:26] CVMFS is ok
[2025-07-26 07:43:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 07:43:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 07:43:26] Further information can be found at the LHC@home message board.
[2025-07-26 07:43:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 07:43:26] Checking for apptainer binary...
[2025-07-26 07:43:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 07:43:26] Running /usr/bin/apptainer --version
[2025-07-26 07:43:26] apptainer version 1.4.1-1.el9
[2025-07-26 07:43:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 07:43:26] minis01.farm.particle.cz
[2025-07-26 07:43:26] apptainer works
[2025-07-26 07:43:26] Set ATHENA_PROC_NUMBER=12
[2025-07-26 07:43:26] Set ATHENA_CORE_NUMBER=12
[2025-07-26 07:43:26] Starting ATLAS job with PandaID=6744944754
[2025-07-26 07:43:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 08:45:36]  *** The last 200 lines of the pilot log: ***
[2025-07-26 08:45:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/1d/log.45743349._013777.job.log.tgz.1
[2025-07-26 08:45:36]  workdir=None
[2025-07-26 08:45:36] ]
[2025-07-26 08:45:36] 2025-07-26 06:44:57,565 | INFO     | transferring file log.45743349._013777.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6744944754/log.45743349._013777.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-26 08:45:36] 2025-07-26 06:44:57,566 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6744944754/log.45743349._013777.job.log.tgz.1 /scratch/.boinc/slots/1/log.45743349._013777.j
[2025-07-26 08:45:36] 2025-07-26 06:44:57,582 | INFO     | adding to output.list: log.45743349._013777.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/1d/log.45743349._013777.job.log.tg
[2025-07-26 08:45:36] 2025-07-26 06:44:57,583 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 08:45:36] 2025-07-26 06:44:57,583 | INFO     | summary of transferred files:
[2025-07-26 08:45:36] 2025-07-26 06:44:57,583 | INFO     |  -- lfn=log.45743349._013777.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 08:45:36] 2025-07-26 06:44:57,583 | INFO     | stage-out finished correctly
[2025-07-26 08:45:36] 2025-07-26 06:45:00,004 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 08:45:36] 2025-07-26 06:45:01,224 | WARNING  | process 740146 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 08:45:36] 2025-07-26 06:45:01,225 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6744944754/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,225 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6744944754/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,226 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4078479 B
[2025-07-26 08:45:36] 2025-07-26 06:45:01,226 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15787 B
[2025-07-26 08:45:36] 2025-07-26 06:45:01,226 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-07-26 08:45:36] 2025-07-26 06:45:01,240 | INFO     | sufficient remaining disk space (709321818112 B)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,240 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,241 | INFO     | size of work directory /scratch/.boinc/slots/1/PanDA_Pilot-6744944754: 4369230 B (within 2537553920 B limit)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,241 | INFO     | pfn file=/scratch/.boinc/slots/1/PanDA_Pilot-6744944754/HITS.45743349._013777.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,241 | INFO     | total size of present files: 0 B (workdir size: 4369230 B)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,242 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/1/PanDA_Pilot-6744944754/HITS.45743349._013777.pool.root.1 since it does not exist
[2025-07-26 08:45:36] 2025-07-26 06:45:01,373 | INFO     | number of running child processes to parent process 740146: 1
[2025-07-26 08:45:36] 2025-07-26 06:45:01,373 | INFO     | maximum number of monitored processes: 6
[2025-07-26 08:45:36] 2025-07-26 06:45:01,673 | INFO     | job 6744944754 has state=finished
[2025-07-26 08:45:36] 2025-07-26 06:45:01,674 | INFO     | preparing for final server update for job 6744944754 in state='finished'
[2025-07-26 08:45:36] 2025-07-26 06:45:01,674 | INFO     | this job has now completed (state=finished)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,675 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,675 | INFO     | log transfer has been attempted: DONE
[2025-07-26 08:45:36] 2025-07-26 06:45:01,675 | INFO     | job 6744944754 has finished - writing final server update
[2025-07-26 08:45:36] 2025-07-26 06:45:01,675 | INFO     | total number of processed events: 400 (read)
[2025-07-26 08:45:36] 2025-07-26 06:45:01,676 | INFO     | executing command: lscpu
[2025-07-26 08:45:36] 2025-07-26 06:45:01,707 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 08:45:36] 2025-07-26 06:45:03,876 | INFO     | monitor loop #279: job 0:6744944754 is in state 'finished'
[2025-07-26 08:45:36] 2025-07-26 06:45:03,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 08:45:36] 2025-07-26 06:45:05,157 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 08:45:36] 2025-07-26 06:45:05,164 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2753.84753125
[2025-07-26 08:45:36] 2025-07-26 06:45:05,171 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6744944754/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 08:45:36] 2025-07-26 06:45:05,171 | INFO     | extracted standard info from prmon json
[2025-07-26 08:45:36] 2025-07-26 06:45:05,172 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 08:45:36] 2025-07-26 06:45:05,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 08:45:36] 2025-07-26 06:45:05,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 08:45:36] 2025-07-26 06:45:05,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 08:45:36] 2025-07-26 06:45:05,174 | INFO     | fitting pss+swap vs Time
[2025-07-26 08:45:36] 2025-07-26 06:45:05,174 | INFO     | sum of square deviations: 46147842.0
[2025-07-26 08:45:36] 2025-07-26 06:45:05,174 | INFO     | sum of deviations: -5990704775.0
[2025-07-26 08:45:36] 2025-07-26 06:45:05,175 | INFO     | mean x: 1753510529.0
[2025-07-26 08:45:36] 2025-07-26 06:45:05,175 | INFO     | mean y: 2831140.9811320757
[2025-07-26 08:45:36] 2025-07-26 06:45:05,175 | INFO     | -- intersect: 227635661709.59314
[2025-07-26 08:45:36] 2025-07-26 06:45:05,175 | INFO     | intersect: 227635661709.59314
[2025-07-26 08:45:36] 2025-07-26 06:45:05,175 | INFO     | chi2: 0.08453299035411273
[2025-07-26 08:45:36] 2025-07-26 06:45:05,175 | INFO     | -- intersect: 227635661709.59314
[2025-07-26 08:45:36] 2025-07-26 06:45:05,175 | INFO     | current memory leak: -129.82 B/s (using 53 data points, chi2=0.08)
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | could have reported an average CPU frequency of 2779 MHz (6 samples)
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | ..............................
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . Timing measurements:
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . get job = 0 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . initial setup = 1 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . payload setup = 5 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . stage-in = 0 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . payload execution = 3658 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . stage-out = 0 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,176 | INFO     | . log creation = 0 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,177 | INFO     | ..............................
[2025-07-26 08:45:36] 2025-07-26 06:45:05,251 | INFO     | 
[2025-07-26 08:45:36] 2025-07-26 06:45:05,251 | INFO     | job summary report
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | --------------------------------------------------
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | PanDA job id: 6744944754
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | task id: 45743349
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | errors: (none)
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | pilot state: finished 
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | transexitcode: 0
[2025-07-26 08:45:36] 2025-07-26 06:45:05,252 | INFO     | exeerrorcode: 0
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | exeerrordiag: 
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | exitcode: 0
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | exitmsg: OK
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | cpuconsumptiontime: 39517 s
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | nevents: 400
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | neventsw: 0
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | pid: 740146
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | pgrp: 740146
[2025-07-26 08:45:36] 2025-07-26 06:45:05,253 | INFO     | corecount: 12
[2025-07-26 08:45:36] 2025-07-26 06:45:05,254 | INFO     | event service: False
[2025-07-26 08:45:36] 2025-07-26 06:45:05,254 | INFO     | sizes: {0: 2397474, 4: 2397736, 11: 2397764, 3668: 2423559, 3669: 2432559, 3672: 2432615, 3677: 2432965}
[2025-07-26 08:45:36] 2025-07-26 06:45:05,254 | INFO     | --------------------------------------------------
[2025-07-26 08:45:36] 2025-07-26 06:45:05,254 | INFO     | 
[2025-07-26 08:45:36] 2025-07-26 06:45:05,254 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-07-26 08:45:36] 2025-07-26 06:45:05,271 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 08:45:36] 2025-07-26 06:45:05,273 | INFO     | job 6744944754 has completed (purged errors)
[2025-07-26 08:45:36] 2025-07-26 06:45:05,274 | INFO     | overall cleanup function is called
[2025-07-26 08:45:36] 2025-07-26 06:45:06,283 | INFO     | --- collectZombieJob: --- 10, [740146]
[2025-07-26 08:45:36] 2025-07-26 06:45:06,283 | INFO     | zombie collector waiting for pid 740146
[2025-07-26 08:45:36] 2025-07-26 06:45:06,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 08:45:36] 2025-07-26 06:45:06,283 | INFO     | collected zombie processes
[2025-07-26 08:45:36] 2025-07-26 06:45:06,283 | INFO     | will attempt to kill all subprocesses of pid=740146
[2025-07-26 08:45:36] 2025-07-26 06:45:06,417 | INFO     | process IDs to be killed: [740146] (in reverse order)
[2025-07-26 08:45:36] 2025-07-26 06:45:06,463 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 08:45:36] 2025-07-26 06:45:06,464 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 08:45:36] 2025-07-26 06:45:06,468 | INFO     | did not find any defunct processes belonging to 740146
[2025-07-26 08:45:36] 2025-07-26 06:45:06,472 | INFO     | did not find any defunct processes belonging to 740146
[2025-07-26 08:45:36] 2025-07-26 06:45:06,472 | INFO     | ready for new job
[2025-07-26 08:45:36] 2025-07-26 06:45:06,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 08:45:36] 2025-07-26 06:45:06,474 | INFO     | ***************************************
[2025-07-26 08:45:36] 2025-07-26 06:45:06,474 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 08:45:36] 2025-07-26 06:45:06,474 | INFO     | ***************************************
[2025-07-26 08:45:36] 2025-07-26 06:45:06,474 | INFO     | 
[2025-07-26 08:45:36] 2025-07-26 06:45:06,476 | INFO     | architecture information:
[2025-07-26 08:45:36] 2025-07-26 06:45:06,476 | INFO     | executing command: cat /etc/os-release
[2025-07-26 08:45:36] 2025-07-26 06:45:06,488 | INFO     | cat /etc/os-release:
[2025-07-26 08:45:36] NAME="CentOS Linux"
[2025-07-26 08:45:36] VERSION="7 (Core)"
[2025-07-26 08:45:36] ID="centos"
[2025-07-26 08:45:36] ID_LIKE="rhel fedora"
[2025-07-26 08:45:36] VERSION_ID="7"
[2025-07-26 08:45:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 08:45:36] ANSI_COLOR="0;31"
[2025-07-26 08:45:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 08:45:36] HOME_URL="https://www.centos.org/"
[2025-07-26 08:45:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 08:45:36] 
[2025-07-26 08:45:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 08:45:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 08:45:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 08:45:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 08:45:36] 
[2025-07-26 08:45:36] 2025-07-26 06:45:06,488 | INFO     | ***************************************
[2025-07-26 08:45:36] 2025-07-26 06:45:06,990 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-07-26 08:45:36] 2025-07-26 06:45:07,004 | INFO     | sufficient remaining disk space (709327060992 B)
[2025-07-26 08:45:36] 2025-07-26 06:45:07,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 08:45:36] 2025-07-26 06:45:07,005 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 08:45:36] 2025-07-26 06:45:07,005 | INFO     | update_server=False
[2025-07-26 08:45:36] 2025-07-26 06:45:07,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 08:45:36] 2025-07-26 06:45:07,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 08:45:36] 2025-07-26 06:45:07,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 08:45:36] 2025-07-26 06:45:07,256 | INFO     | all data control threads have been joined
[2025-07-26 08:45:36] 2025-07-26 06:45:07,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 08:45:36] 2025-07-26 06:45:07,385 | INFO     | aborting loop
[2025-07-26 08:45:36] 2025-07-26 06:45:07,616 | INFO     | all job control threads have been joined
[2025-07-26 08:45:36] 2025-07-26 06:45:07,770 | INFO     | all payload control threads have been joined
[2025-07-26 08:45:36] 2025-07-26 06:45:08,010 | INFO     | [job] retrieve thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,011 | INFO     | [job] queue monitor thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 08:45:36] 2025-07-26 06:45:08,261 | INFO     | [data] control thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,390 | INFO     | [job] job monitor thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,427 | INFO     | [data] copytool_in thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,430 | INFO     | [payload] validate_post thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,514 | INFO     | [payload] failed_post thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,621 | INFO     | [job] control thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,776 | INFO     | [payload] control thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:08,982 | INFO     | [job] validate thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:09,152 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:09,251 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:09,340 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:10,175 | INFO     | [data] copytool_out thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:11,012 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:17,068 | INFO     | job.realtimelogging is not enabled
[2025-07-26 08:45:36] 2025-07-26 06:45:18,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 08:45:36] 2025-07-26 06:45:18,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139759056697152)>', '<ExcThread(monitor, started 139758411958016)>']
[2025-07-26 08:45:36] 2025-07-26 06:45:23,435 | INFO     | all workflow threads have been joined
[2025-07-26 08:45:36] 2025-07-26 06:45:23,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 08:45:36] 2025-07-26 06:45:23,436 | INFO     | traces error code: 0
[2025-07-26 08:45:36] 2025-07-26 06:45:23,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 08:45:36] 2025-07-26 06:45:36,757 | INFO     | PID=733408 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 08:45:36] 2025-07-26 06:45:36,757 | INFO     | .. there are 2 such processes running
[2025-07-26 08:45:36] 2025-07-26 06:45:36,758 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 08:45:36] 2025-07-26 06:45:36,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 08:45:36] 2025-07-26 06:45:36,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 08:45:36] 2025-07-26 06:45:36,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 08:45:36] 2025-07-26 06:45:36,758 | INFO     | [monitor] control thread has ended
[2025-07-26 08:45:36] 2025-07-26 06:45:36,859 [wrapper] ==== pilot stdout END ====
[2025-07-26 08:45:36] 2025-07-26 06:45:36,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 08:45:36] 2025-07-26 06:45:36,864 [wrapper] pilotpid: 733408
[2025-07-26 08:45:36] 2025-07-26 06:45:36,867 [wrapper] Pilot exit status: 0
[2025-07-26 08:45:36] 2025-07-26 06:45:36,876 [wrapper] pandaids: 6744944754
[2025-07-26 08:45:36] 2025-07-26 06:45:36,909 [wrapper] cleanup supervisor_pilot  798576 733409
[2025-07-26 08:45:36] 2025-07-26 06:45:36,912 [wrapper] Test setup, not cleaning
[2025-07-26 08:45:36] 2025-07-26 06:45:36,914 [wrapper] apfmon messages muted
[2025-07-26 08:45:36] 2025-07-26 06:45:36,917 [wrapper] ==== wrapper stdout END ====
[2025-07-26 08:45:36] 2025-07-26 06:45:36,919 [wrapper] ==== wrapper stderr END ====
[2025-07-26 08:45:36]  *** Error codes and diagnostics ***
[2025-07-26 08:45:36]     "exeErrorCode": 0,
[2025-07-26 08:45:36]     "exeErrorDiag": "",
[2025-07-26 08:45:36]     "pilotErrorCode": 0,
[2025-07-26 08:45:36]     "pilotErrorDiag": "",
[2025-07-26 08:45:36]  *** Listing of results directory ***
[2025-07-26 08:45:36] total 357668
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc    530466 Jul 25 02:40 pilot3.tar.gz
[2025-07-26 08:45:36] -rwx------ 1 boinc boinc     36292 Jul 25 02:57 runpilot2-wrapper.sh
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc      5112 Jul 25 02:57 queuedata.json
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc       100 Jul 26 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 08:45:36] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 07:43 run_atlas
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc       105 Jul 26 07:43 job.xml
[2025-07-26 08:45:36] -rw-r--r-- 2 boinc boinc 146059121 Jul 26 07:43 EVNT.45743347._000753.pool.root.1
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc      6522 Jul 26 07:43 init_data.xml
[2025-07-26 08:45:36] -rw-r--r-- 2 boinc boinc     15095 Jul 26 07:43 start_atlas.sh
[2025-07-26 08:45:36] drwxrwx--x 2 boinc boinc      4096 Jul 26 07:43 shared
[2025-07-26 08:45:36] -rw-r--r-- 2 boinc boinc    542891 Jul 26 07:43 input.tar.gz
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc         0 Jul 26 07:43 boinc_lockfile
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc      2562 Jul 26 07:43 pandaJob.out
[2025-07-26 08:45:36] -rw------- 1 boinc boinc    980001 Jul 26 07:43 agis_schedconf.cvmfs.json
[2025-07-26 08:45:36] -rw------- 1 boinc boinc   1593052 Jul 26 07:43 agis_ddmendpoints.agis.ALL.json
[2025-07-26 08:45:36] drwx------ 4 boinc boinc      4096 Jul 26 07:43 pilot3
[2025-07-26 08:45:36] -rw------- 1 boinc boinc 214855107 Jul 26 08:44 HITS.45743349._013777.pool.root.1
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc       529 Jul 26 08:44 boinc_task_state.xml
[2025-07-26 08:45:36] -rw------- 1 boinc boinc      1015 Jul 26 08:44 memory_monitor_summary.json
[2025-07-26 08:45:36] -rw------- 1 boinc boinc    352037 Jul 26 08:44 log.45743349._013777.job.log.tgz.1
[2025-07-26 08:45:36] -rw------- 1 boinc boinc      7776 Jul 26 08:45 heartbeat.json
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc        27 Jul 26 08:45 wrapper_checkpoint.txt
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc      8192 Jul 26 08:45 boinc_mmap_file
[2025-07-26 08:45:36] -rw------- 1 boinc boinc        95 Jul 26 08:45 pilot_heartbeat.json
[2025-07-26 08:45:36] -rw------- 1 boinc boinc       821 Jul 26 08:45 pilotlog.txt
[2025-07-26 08:45:36] -rw------- 1 boinc boinc    381063 Jul 26 08:45 log.45743349._013777.job.log.1
[2025-07-26 08:45:36] -rw------- 1 boinc boinc       357 Jul 26 08:45 output.list
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc       620 Jul 26 08:45 runtime_log
[2025-07-26 08:45:36] -rw------- 1 boinc boinc    747520 Jul 26 08:45 result.tar.gz
[2025-07-26 08:45:36] -rw------- 1 boinc boinc       663 Jul 26 08:45 yVlLDmpvLz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbLOLDmhWjrJo.diag
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc      8721 Jul 26 08:45 runtime_log.err
[2025-07-26 08:45:36] -rw-r--r-- 1 boinc boinc     22575 Jul 26 08:45 stderr.txt
[2025-07-26 08:45:36] HITS file was successfully produced:
[2025-07-26 08:45:36] -rw------- 1 boinc boinc 214855107 Jul 26 08:44 shared/HITS.pool.root.1
[2025-07-26 08:45:36]  *** Contents of shared directory: ***
[2025-07-26 08:45:37] total 353744
[2025-07-26 08:45:37] -rw-r--r-- 2 boinc boinc 146059121 Jul 26 07:43 ATLAS.root_0
[2025-07-26 08:45:37] -rw-r--r-- 2 boinc boinc     15095 Jul 26 07:43 start_atlas.sh
[2025-07-26 08:45:37] -rw-r--r-- 2 boinc boinc    542891 Jul 26 07:43 input.tar.gz
[2025-07-26 08:45:37] -rw------- 1 boinc boinc 214855107 Jul 26 08:44 HITS.pool.root.1
[2025-07-26 08:45:37] -rw------- 1 boinc boinc    747520 Jul 26 08:45 result.tar.gz
08:45:38 (729602): run_atlas exited; CPU time 39554.917526
08:45:38 (729602): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN