Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
07:05:56 (2617275): wrapper (7.7.26015): starting
07:05:56 (2617275): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 07:05:56] Arguments: --nthreads 4
[2025-07-27 07:05:56] Threads: 4
[2025-07-27 07:05:56] Checking for CVMFS
[2025-07-27 07:05:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:05:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:05:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:05:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:05:56] 2.12.7.0 1958 7279 66440 148800 0 188 3540820 4096000 917 130560 0 7158752 99.992 269397 3274 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-07-27 07:05:56] CVMFS is ok
[2025-07-27 07:05:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:05:56] Checking for apptainer binary...
[2025-07-27 07:05:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 07:05:56] Running /usr/bin/apptainer --version
[2025-07-27 07:05:56] apptainer version 1.4.1
[2025-07-27 07:05:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:05:56] TC-910
[2025-07-27 07:05:56] apptainer works
[2025-07-27 07:05:56] Set ATHENA_PROC_NUMBER=4
[2025-07-27 07:05:56] Set ATHENA_CORE_NUMBER=4
[2025-07-27 07:05:56] Starting ATLAS job with PandaID=6744950163
[2025-07-27 07:05:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:33:02]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:33:02] 2025-07-27 07:32:51,657 | INFO     | mean y: 2370010.3884892086
[2025-07-27 09:33:02] 2025-07-27 07:32:51,657 | INFO     | -- intersect: -4647862979.957283
[2025-07-27 09:33:02] 2025-07-27 07:32:51,657 | INFO     | intersect: -4647862979.957283
[2025-07-27 09:33:02] 2025-07-27 07:32:51,657 | INFO     | chi2: 1.1623212668088823
[2025-07-27 09:33:02] 2025-07-27 07:32:51,657 | INFO     | current chi2=1.1623212668088823 (change=-0.05834188872334124 %)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,657 | INFO     | right removable region: 138
[2025-07-27 09:33:02] 2025-07-27 07:32:51,658 | INFO     | sum of square deviations: 832722590.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,658 | INFO     | sum of deviations: -9585730076.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,658 | INFO     | mean x: 1753597295.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,658 | INFO     | mean y: 2388707.4316546763
[2025-07-27 09:33:02] 2025-07-27 07:32:51,658 | INFO     | -- intersect: 20188595415.086536
[2025-07-27 09:33:02] 2025-07-27 07:32:51,658 | INFO     | intersect: 20188595415.086536
[2025-07-27 09:33:02] 2025-07-27 07:32:51,658 | INFO     | chi2: 0.09812229057908539
[2025-07-27 09:33:02] 2025-07-27 07:32:51,659 | INFO     | current chi2=0.09812229057908539 (change=91.55314973748894 %)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,659 | INFO     | sum of square deviations: 746051197.5
[2025-07-27 09:33:02] 2025-07-27 07:32:51,659 | INFO     | sum of deviations: -4844282304.000001
[2025-07-27 09:33:02] 2025-07-27 07:32:51,659 | INFO     | mean x: 1753597447.5
[2025-07-27 09:33:02] 2025-07-27 07:32:51,659 | INFO     | mean y: 2380352.552238806
[2025-07-27 09:33:02] 2025-07-27 07:32:51,659 | INFO     | -- intersect: 11388892580.8418
[2025-07-27 09:33:02] 2025-07-27 07:32:51,659 | INFO     | intersect: 11388892580.8418
[2025-07-27 09:33:02] 2025-07-27 07:32:51,660 | INFO     | chi2: 0.06855247404216523
[2025-07-27 09:33:02] 2025-07-27 07:32:51,660 | INFO     | current chi2=0.06855247404216523 (change=30.135676982680344 %)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,660 | INFO     | sum of square deviations: 665612480.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,660 | INFO     | sum of deviations: 363918496.99999976
[2025-07-27 09:33:02] 2025-07-27 07:32:51,660 | INFO     | mean x: 1753597600.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,661 | INFO     | mean y: 2370469.6434108526
[2025-07-27 09:33:02] 2025-07-27 07:32:51,661 | INFO     | -- intersect: -956395512.2306173
[2025-07-27 09:33:02] 2025-07-27 07:32:51,661 | INFO     | intersect: -956395512.2306173
[2025-07-27 09:33:02] 2025-07-27 07:32:51,661 | INFO     | chi2: 0.01596501758949031
[2025-07-27 09:33:02] 2025-07-27 07:32:51,661 | INFO     | current chi2=0.01596501758949031 (change=76.71124519930447 %)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,661 | INFO     | sum of square deviations: 591173875.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,661 | INFO     | sum of deviations: 912377945.5
[2025-07-27 09:33:02] 2025-07-27 07:32:51,662 | INFO     | mean x: 1753597752.5
[2025-07-27 09:33:02] 2025-07-27 07:32:51,662 | INFO     | mean y: 2369415.9758064514
[2025-07-27 09:33:02] 2025-07-27 07:32:51,662 | INFO     | -- intersect: -2704015257.5001106
[2025-07-27 09:33:02] 2025-07-27 07:32:51,662 | INFO     | intersect: -2704015257.5001106
[2025-07-27 09:33:02] 2025-07-27 07:32:51,662 | INFO     | chi2: 0.0015707148032136538
[2025-07-27 09:33:02] 2025-07-27 07:32:51,662 | INFO     | current chi2=0.0015707148032136538 (change=90.16152162433164 %)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,662 | INFO     | sum of square deviations: 522502820.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | sum of deviations: 490013914.99999976
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | mean x: 1753597905.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | mean y: 2370354.1092436975
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | -- intersect: -1642189908.2924936
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | intersect: -1642189908.2924936
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | chi2: 0.0012744916948492343
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | current chi2=0.0012744916948492343 (change=18.859127561435873 %)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | left removable region: 50
[2025-07-27 09:33:02] 2025-07-27 07:32:51,663 | INFO     | sum of square deviations: 211285822.0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | sum of deviations: -28343710.99999997
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | mean x: 1753598484.5
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | mean y: 2371878.5454545454
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | -- intersect: 237614774.56289732
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | intersect: 237614774.56289732
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | chi2: 0.0006580886722929496
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | -- intersect: 237614774.56289732
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | current memory leak: -0.13 B/s (using 88 data points, chi2=0.00)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,664 | INFO     | could have reported an average CPU frequency of 4000 MHz (8 samples)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | ..............................
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . Timing measurements:
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . get job = 0 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . initial setup = 1 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . payload setup = 3 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . stage-in = 0 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . payload execution = 8782 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . stage-out = 0 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | . log creation = 0 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,665 | INFO     | ..............................
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | 
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | job summary report
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | --------------------------------------------------
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | PanDA job id: 6744950163
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | task id: 45743349
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | errors: (none)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | pilot state: finished 
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | transexitcode: 0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | exeerrorcode: 0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | exeerrordiag: 
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | exitcode: 0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | exitmsg: OK
[2025-07-27 09:33:02] 2025-07-27 07:32:51,731 | INFO     | cpuconsumptiontime: 32963 s
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | nevents: 400
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | neventsw: 0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | pid: 2627364
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | pgrp: 2627364
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | corecount: 4
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | event service: False
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | sizes: {0: 2397301, 1: 2397500, 3: 2397762, 11: 2397790, 8790: 2426002, 8791: 2435000, 8792: 2435184, 8797: 2435378}
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | --------------------------------------------------
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | 
[2025-07-27 09:33:02] 2025-07-27 07:32:51,732 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 09:33:02] 2025-07-27 07:32:51,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:33:02] 2025-07-27 07:32:51,746 | INFO     | job 6744950163 has completed (purged errors)
[2025-07-27 09:33:02] 2025-07-27 07:32:51,746 | INFO     | overall cleanup function is called
[2025-07-27 09:33:02] 2025-07-27 07:32:52,750 | INFO     | --- collectZombieJob: --- 10, [2627364]
[2025-07-27 09:33:02] 2025-07-27 07:32:52,750 | INFO     | zombie collector waiting for pid 2627364
[2025-07-27 09:33:02] 2025-07-27 07:32:52,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:33:02] 2025-07-27 07:32:52,750 | INFO     | collected zombie processes
[2025-07-27 09:33:02] 2025-07-27 07:32:52,750 | INFO     | will attempt to kill all subprocesses of pid=2627364
[2025-07-27 09:33:02] 2025-07-27 07:32:52,822 | INFO     | process IDs to be killed: [2627364] (in reverse order)
[2025-07-27 09:33:02] 2025-07-27 07:32:52,849 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:33:02] 2025-07-27 07:32:52,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:33:02] 2025-07-27 07:32:52,852 | INFO     | did not find any defunct processes belonging to 2627364
[2025-07-27 09:33:02] 2025-07-27 07:32:52,854 | INFO     | did not find any defunct processes belonging to 2627364
[2025-07-27 09:33:02] 2025-07-27 07:32:52,854 | INFO     | ready for new job
[2025-07-27 09:33:02] 2025-07-27 07:32:52,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:33:02] 2025-07-27 07:32:52,855 | INFO     | ***************************************
[2025-07-27 09:33:02] 2025-07-27 07:32:52,855 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:33:02] 2025-07-27 07:32:52,855 | INFO     | ***************************************
[2025-07-27 09:33:02] 2025-07-27 07:32:52,855 | INFO     | 
[2025-07-27 09:33:02] 2025-07-27 07:32:52,856 | INFO     | architecture information:
[2025-07-27 09:33:02] 2025-07-27 07:32:52,856 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:33:02] 2025-07-27 07:32:52,864 | INFO     | cat /etc/os-release:
[2025-07-27 09:33:02] NAME="CentOS Linux"
[2025-07-27 09:33:02] VERSION="7 (Core)"
[2025-07-27 09:33:02] ID="centos"
[2025-07-27 09:33:02] ID_LIKE="rhel fedora"
[2025-07-27 09:33:02] VERSION_ID="7"
[2025-07-27 09:33:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:33:02] ANSI_COLOR="0;31"
[2025-07-27 09:33:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:33:02] HOME_URL="https://www.centos.org/"
[2025-07-27 09:33:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:33:02] 
[2025-07-27 09:33:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:33:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:33:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:33:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:33:02] 
[2025-07-27 09:33:02] 2025-07-27 07:32:52,864 | INFO     | ***************************************
[2025-07-27 09:33:02] 2025-07-27 07:32:53,367 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 09:33:02] 2025-07-27 07:32:53,375 | INFO     | sufficient remaining disk space (165648793600 B)
[2025-07-27 09:33:02] 2025-07-27 07:32:53,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:33:02] 2025-07-27 07:32:53,375 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | INFO     | update_server=False
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:33:02] 2025-07-27 07:32:53,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:33:02] 2025-07-27 07:32:53,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:33:02] 2025-07-27 07:32:53,906 | INFO     | all payload control threads have been joined
[2025-07-27 09:33:02] 2025-07-27 07:32:53,953 | INFO     | all data control threads have been joined
[2025-07-27 09:33:02] 2025-07-27 07:32:54,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:33:02] 2025-07-27 07:32:54,214 | INFO     | aborting loop
[2025-07-27 09:33:02] 2025-07-27 07:32:54,345 | INFO     | all job control threads have been joined
[2025-07-27 09:33:02] 2025-07-27 07:32:54,380 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,380 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,617 | INFO     | [job] validate thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,727 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,790 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,817 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,910 | INFO     | [payload] control thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:54,957 | INFO     | [data] control thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:55,037 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:55,217 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:55,350 | INFO     | [job] control thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:55,567 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:55,690 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:55,794 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:57,380 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:33:02] 2025-07-27 07:32:57,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698836449088)>', '<ExcThread(monitor, started 140698338707200)>']
[2025-07-27 09:33:02] 2025-07-27 07:32:58,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:33:02] 2025-07-27 07:32:58,399 | INFO     | [monitor] control thread has ended
[2025-07-27 09:33:02] 2025-07-27 07:33:02,490 | INFO     | all workflow threads have been joined
[2025-07-27 09:33:02] 2025-07-27 07:33:02,490 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:33:02] 2025-07-27 07:33:02,490 | INFO     | traces error code: 0
[2025-07-27 09:33:02] 2025-07-27 07:33:02,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:33:02] 2025-07-27 07:33:02,565 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:33:02] 2025-07-27 07:33:02,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:33:02] 2025-07-27 07:33:02,568 [wrapper] pilotpid: 2620901
[2025-07-27 09:33:02] 2025-07-27 07:33:02,570 [wrapper] Pilot exit status: 0
[2025-07-27 09:33:02] 2025-07-27 07:33:02,575 [wrapper] pandaids: 6744950163
[2025-07-27 09:33:02] 2025-07-27 07:33:02,595 [wrapper] cleanup supervisor_pilot 2674259 2620902
[2025-07-27 09:33:02] 2025-07-27 07:33:02,597 [wrapper] Test setup, not cleaning
[2025-07-27 09:33:02] 2025-07-27 07:33:02,598 [wrapper] apfmon messages muted
[2025-07-27 09:33:02] 2025-07-27 07:33:02,600 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:33:02] 2025-07-27 07:33:02,601 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:33:02]  *** Error codes and diagnostics ***
[2025-07-27 09:33:02]     "exeErrorCode": 0,
[2025-07-27 09:33:02]     "exeErrorDiag": "",
[2025-07-27 09:33:02]     "pilotErrorCode": 0,
[2025-07-27 09:33:02]     "pilotErrorDiag": "",
[2025-07-27 09:33:02]  *** Listing of results directory ***
[2025-07-27 09:33:02] insgesamt 344008
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc    530466 25. Jul 05:49 pilot3.tar.gz
[2025-07-27 09:33:02] -rwx------ 1 boinc boinc     36292 25. Jul 06:01 runpilot2-wrapper.sh
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc      5112 25. Jul 06:01 queuedata.json
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc       100 27. Jul 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:33:02] -rwxr-xr-x 1 boinc boinc      7986 27. Jul 07:05 run_atlas
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc       105 27. Jul 07:05 job.xml
[2025-07-27 09:33:02] -rw-r--r-- 2 boinc boinc 144282144 27. Jul 07:05 EVNT.45743347._000877.pool.root.1
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc      9787 27. Jul 07:05 init_data.xml
[2025-07-27 09:33:02] drwxrwx--x 2 boinc boinc      4096 27. Jul 07:05 shared
[2025-07-27 09:33:02] -rw-r--r-- 2 boinc boinc    542889 27. Jul 07:05 input.tar.gz
[2025-07-27 09:33:02] -rw-r--r-- 2 boinc boinc     15095 27. Jul 07:05 start_atlas.sh
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc         0 27. Jul 07:05 boinc_lockfile
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc      2561 27. Jul 07:05 pandaJob.out
[2025-07-27 09:33:02] -rw------- 1 boinc boinc    980125 27. Jul 07:06 agis_schedconf.cvmfs.json
[2025-07-27 09:33:02] -rw------- 1 boinc boinc   1593052 27. Jul 07:06 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:33:02] drwx------ 4 boinc boinc      4096 27. Jul 07:06 pilot3
[2025-07-27 09:33:02] -rw------- 1 boinc boinc        95 27. Jul 09:32 pilot_heartbeat.json
[2025-07-27 09:33:02] -rw------- 1 boinc boinc 201850080 27. Jul 09:32 HITS.45743349._015740.pool.root.1
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc       529 27. Jul 09:32 boinc_task_state.xml
[2025-07-27 09:33:02] -rw------- 1 boinc boinc      1034 27. Jul 09:32 memory_monitor_summary.json
[2025-07-27 09:33:02] -rw------- 1 boinc boinc    275368 27. Jul 09:32 log.45743349._015740.job.log.tgz.1
[2025-07-27 09:33:02] -rw------- 1 boinc boinc      7751 27. Jul 09:32 heartbeat.json
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc        27 27. Jul 09:33 wrapper_checkpoint.txt
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc      8192 27. Jul 09:33 boinc_mmap_file
[2025-07-27 09:33:02] -rw------- 1 boinc boinc      4481 27. Jul 09:33 pilotlog.txt
[2025-07-27 09:33:02] -rw------- 1 boinc boinc    847705 27. Jul 09:33 log.45743349._015740.job.log.1
[2025-07-27 09:33:02] -rw------- 1 boinc boinc       357 27. Jul 09:33 output.list
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc       620 27. Jul 09:33 runtime_log
[2025-07-27 09:33:02] -rw------- 1 boinc boinc   1146880 27. Jul 09:33 result.tar.gz
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc      8620 27. Jul 09:33 runtime_log.err
[2025-07-27 09:33:02] -rw------- 1 boinc boinc       642 27. Jul 09:33 8ZqLDmwnOz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIQyKDmVq53Jn.diag
[2025-07-27 09:33:02] -rw-r--r-- 1 boinc boinc     20525 27. Jul 09:33 stderr.txt
[2025-07-27 09:33:02] HITS file was successfully produced:
[2025-07-27 09:33:02] -rw------- 1 boinc boinc 201850080 27. Jul 09:32 shared/HITS.pool.root.1
[2025-07-27 09:33:02]  *** Contents of shared directory: ***
[2025-07-27 09:33:02] insgesamt 339696
[2025-07-27 09:33:02] -rw-r--r-- 2 boinc boinc 144282144 27. Jul 07:05 ATLAS.root_0
[2025-07-27 09:33:02] -rw-r--r-- 2 boinc boinc    542889 27. Jul 07:05 input.tar.gz
[2025-07-27 09:33:02] -rw-r--r-- 2 boinc boinc     15095 27. Jul 07:05 start_atlas.sh
[2025-07-27 09:33:02] -rw------- 1 boinc boinc 201850080 27. Jul 09:32 HITS.pool.root.1
[2025-07-27 09:33:02] -rw------- 1 boinc boinc   1146880 27. Jul 09:33 result.tar.gz
09:33:04 (2617275): run_atlas exited; CPU time 33039.743520
09:33:04 (2617275): called boinc_finish(0)

</stderr_txt>
]]>

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