Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:15:48 (746063): wrapper (7.7.26015): starting
16:15:48 (746063): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 16:15:48] Arguments: --nthreads 4
[2025-07-27 16:15:48] Threads: 4
[2025-07-27 16:15:48] Checking for CVMFS
[2025-07-27 16:15:48] No cvmfs_config command found, will try listing directly
[2025-07-27 16:15:48] CVMFS is ok
[2025-07-27 16:15:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:15:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:15:48] Further information can be found at the LHC@home message board.
[2025-07-27 16:15:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:15:48] Checking for apptainer binary...
[2025-07-27 16:15:48] which: no apptainer in ((null))
[2025-07-27 16:15:48] apptainer is not installed, using version from CVMFS
[2025-07-27 16:15:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:15:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-07-27 16:15:49] apptainer works
[2025-07-27 16:15:49] Set ATHENA_PROC_NUMBER=4
[2025-07-27 16:15:49] Set ATHENA_CORE_NUMBER=4
[2025-07-27 16:15:49] Starting ATLAS job with PandaID=6744949663
[2025-07-27 16:15:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:22:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:22:04] 2025-07-27 17:21:27,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,111 | INFO     | monitor loop #768: job 0:6744949663 is in state 'finished'
[2025-07-27 19:22:04] 2025-07-27 17:21:30,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,268 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:22:04] 2025-07-27 17:21:30,287 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2744.64725
[2025-07-27 19:22:04] 2025-07-27 17:21:30,311 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6744949663/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,312 | INFO     | extracted standard info from prmon json
[2025-07-27 19:22:04] 2025-07-27 17:21:30,312 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:22:04] 2025-07-27 17:21:30,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:22:04] 2025-07-27 17:21:30,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:22:04] 2025-07-27 17:21:30,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:22:04] 2025-07-27 17:21:30,315 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:22:04] 2025-07-27 17:21:30,316 | INFO     | sum of square deviations: 1869302025.5
[2025-07-27 19:22:04] 2025-07-27 17:21:30,317 | INFO     | sum of deviations: -14926152189.500002
[2025-07-27 19:22:04] 2025-07-27 17:21:30,317 | INFO     | mean x: 1753631323.5
[2025-07-27 19:22:04] 2025-07-27 17:21:30,317 | INFO     | mean y: 2359520.8846153845
[2025-07-27 19:22:04] 2025-07-27 17:21:30,317 | INFO     | -- intersect: 14004895045.786774
[2025-07-27 19:22:04] 2025-07-27 17:21:30,317 | INFO     | intersect: 14004895045.786774
[2025-07-27 19:22:04] 2025-07-27 17:21:30,318 | INFO     | chi2: 1.492569481484472
[2025-07-27 19:22:04] 2025-07-27 17:21:30,318 | INFO     | sum of square deviations: 1719429448.0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,319 | INFO     | sum of deviations: -14322057264.00001
[2025-07-27 19:22:04] 2025-07-27 17:21:30,319 | INFO     | mean x: 1753631171.0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,319 | INFO     | mean y: 2360135.790960452
[2025-07-27 19:22:04] 2025-07-27 17:21:30,319 | INFO     | -- intersect: 14609302037.484734
[2025-07-27 19:22:04] 2025-07-27 17:21:30,319 | INFO     | intersect: 14609302037.484734
[2025-07-27 19:22:04] 2025-07-27 17:21:30,320 | INFO     | chi2: 1.4906223295538357
[2025-07-27 19:22:04] 2025-07-27 17:21:30,320 | INFO     | current chi2=1.4906223295538357 (change=0.1304563676794362 %)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,320 | INFO     | right removable region: 176
[2025-07-27 19:22:04] 2025-07-27 17:21:30,320 | INFO     | sum of square deviations: 1719429448.0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,321 | INFO     | sum of deviations: -35059571331.0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,321 | INFO     | mean x: 1753631476.0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,321 | INFO     | mean y: 2379628.361581921
[2025-07-27 19:22:04] 2025-07-27 17:21:30,322 | INFO     | -- intersect: 35759338364.07635
[2025-07-27 19:22:04] 2025-07-27 17:21:30,322 | INFO     | intersect: 35759338364.07635
[2025-07-27 19:22:04] 2025-07-27 17:21:30,322 | INFO     | chi2: 0.17388568891938672
[2025-07-27 19:22:04] 2025-07-27 17:21:30,322 | INFO     | current chi2=0.17388568891938672 (change=88.34990993206934 %)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,322 | INFO     | sum of square deviations: 1577789583.0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,323 | INFO     | sum of deviations: -26610784356.5
[2025-07-27 19:22:04] 2025-07-27 17:21:30,323 | INFO     | mean x: 1753631628.5
[2025-07-27 19:22:04] 2025-07-27 17:21:30,323 | INFO     | mean y: 2370523.0290697673
[2025-07-27 19:22:04] 2025-07-27 17:21:30,324 | INFO     | -- intersect: 29578882885.356804
[2025-07-27 19:22:04] 2025-07-27 17:21:30,324 | INFO     | intersect: 29578882885.356804
[2025-07-27 19:22:04] 2025-07-27 17:21:30,324 | INFO     | chi2: 0.13545888778134701
[2025-07-27 19:22:04] 2025-07-27 17:21:30,324 | INFO     | current chi2=0.13545888778134701 (change=22.098886559810186 %)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,324 | INFO     | left removable region: 20
[2025-07-27 19:22:04] 2025-07-27 17:21:30,325 | INFO     | sum of square deviations: 1177156955.0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,325 | INFO     | sum of deviations: -10062659795.999998
[2025-07-27 19:22:04] 2025-07-27 17:21:30,326 | INFO     | mean x: 1753631750.5
[2025-07-27 19:22:04] 2025-07-27 17:21:30,326 | INFO     | mean y: 2352158.2564102565
[2025-07-27 19:22:04] 2025-07-27 17:21:30,326 | INFO     | -- intersect: 14992876266.18682
[2025-07-27 19:22:04] 2025-07-27 17:21:30,326 | INFO     | intersect: 14992876266.18682
[2025-07-27 19:22:04] 2025-07-27 17:21:30,326 | INFO     | chi2: 0.018877310956577777
[2025-07-27 19:22:04] 2025-07-27 17:21:30,326 | INFO     | -- intersect: 14992876266.18682
[2025-07-27 19:22:04] 2025-07-27 17:21:30,326 | INFO     | current memory leak: -8.55 B/s (using 156 data points, chi2=0.02)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | could have reported an average CPU frequency of 2719 MHz (10 samples)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | ..............................
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . Timing measurements:
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . get job = 0 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . initial setup = 1 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . payload setup = 11 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . stage-in = 0 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . payload execution = 11081 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . stage-out = 1 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | . log creation = 0 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,327 | INFO     | ..............................
[2025-07-27 19:22:04] 2025-07-27 17:21:30,899 | INFO     | 
[2025-07-27 19:22:04] 2025-07-27 17:21:30,899 | INFO     | job summary report
[2025-07-27 19:22:04] 2025-07-27 17:21:30,899 | INFO     | --------------------------------------------------
[2025-07-27 19:22:04] 2025-07-27 17:21:30,899 | INFO     | PanDA job id: 6744949663
[2025-07-27 19:22:04] 2025-07-27 17:21:30,899 | INFO     | task id: 45743349
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | errors: (none)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | pilot state: finished 
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | transexitcode: 0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | exeerrorcode: 0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | exeerrordiag: 
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | exitcode: 0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | exitmsg: OK
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | cpuconsumptiontime: 42987 s
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | nevents: 400
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | neventsw: 0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,900 | INFO     | pid: 757864
[2025-07-27 19:22:04] 2025-07-27 17:21:30,901 | INFO     | pgrp: 757864
[2025-07-27 19:22:04] 2025-07-27 17:21:30,901 | INFO     | corecount: 4
[2025-07-27 19:22:04] 2025-07-27 17:21:30,901 | INFO     | event service: False
[2025-07-27 19:22:04] 2025-07-27 17:21:30,901 | INFO     | sizes: {0: 2397314, 1: 2397513, 8: 2397775, 12: 2397803, 11096: 2427554, 11097: 2436760, 11107: 2436898}
[2025-07-27 19:22:04] 2025-07-27 17:21:30,901 | INFO     | --------------------------------------------------
[2025-07-27 19:22:04] 2025-07-27 17:21:30,901 | INFO     | 
[2025-07-27 19:22:04] 2025-07-27 17:21:30,901 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-07-27 19:22:04] 2025-07-27 17:21:30,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:22:04] 2025-07-27 17:21:30,935 | INFO     | job 6744949663 has completed (purged errors)
[2025-07-27 19:22:04] 2025-07-27 17:21:30,936 | INFO     | overall cleanup function is called
[2025-07-27 19:22:04] 2025-07-27 17:21:31,945 | INFO     | --- collectZombieJob: --- 10, [757864]
[2025-07-27 19:22:04] 2025-07-27 17:21:31,945 | INFO     | zombie collector waiting for pid 757864
[2025-07-27 19:22:04] 2025-07-27 17:21:31,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:22:04] 2025-07-27 17:21:31,945 | INFO     | collected zombie processes
[2025-07-27 19:22:04] 2025-07-27 17:21:31,945 | INFO     | will attempt to kill all subprocesses of pid=757864
[2025-07-27 19:22:04] 2025-07-27 17:21:32,622 | INFO     | process IDs to be killed: [757864] (in reverse order)
[2025-07-27 19:22:04] 2025-07-27 17:21:32,884 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:22:04] 2025-07-27 17:21:32,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:22:04] 2025-07-27 17:21:32,910 | INFO     | did not find any defunct processes belonging to 757864
[2025-07-27 19:22:04] 2025-07-27 17:21:32,933 | INFO     | did not find any defunct processes belonging to 757864
[2025-07-27 19:22:04] 2025-07-27 17:21:32,933 | INFO     | ready for new job
[2025-07-27 19:22:04] 2025-07-27 17:21:32,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:22:04] 2025-07-27 17:21:32,936 | INFO     | ***************************************
[2025-07-27 19:22:04] 2025-07-27 17:21:32,936 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:22:04] 2025-07-27 17:21:32,936 | INFO     | ***************************************
[2025-07-27 19:22:04] 2025-07-27 17:21:32,936 | INFO     | 
[2025-07-27 19:22:04] 2025-07-27 17:21:32,944 | INFO     | architecture information:
[2025-07-27 19:22:04] 2025-07-27 17:21:32,944 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:22:04] 2025-07-27 17:21:32,966 | INFO     | cat /etc/os-release:
[2025-07-27 19:22:04] NAME="CentOS Linux"
[2025-07-27 19:22:04] VERSION="7 (Core)"
[2025-07-27 19:22:04] ID="centos"
[2025-07-27 19:22:04] ID_LIKE="rhel fedora"
[2025-07-27 19:22:04] VERSION_ID="7"
[2025-07-27 19:22:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:22:04] ANSI_COLOR="0;31"
[2025-07-27 19:22:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:22:04] HOME_URL="https://www.centos.org/"
[2025-07-27 19:22:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:22:04] 
[2025-07-27 19:22:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:22:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:22:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:22:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:22:04] 
[2025-07-27 19:22:04] 2025-07-27 17:21:32,966 | INFO     | ***************************************
[2025-07-27 19:22:04] 2025-07-27 17:21:33,468 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-07-27 19:22:04] 2025-07-27 17:21:33,490 | INFO     | sufficient remaining disk space (3251702333440 B)
[2025-07-27 19:22:04] 2025-07-27 17:21:33,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:22:04] 2025-07-27 17:21:33,491 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:22:04] 2025-07-27 17:21:33,491 | INFO     | update_server=False
[2025-07-27 19:22:04] 2025-07-27 17:21:33,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:22:04] 2025-07-27 17:21:33,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:22:04] 2025-07-27 17:21:33,619 | INFO     | aborting loop
[2025-07-27 19:22:04] 2025-07-27 17:21:33,867 | INFO     | all data control threads have been joined
[2025-07-27 19:22:04] 2025-07-27 17:21:33,874 | INFO     | all payload control threads have been joined
[2025-07-27 19:22:04] 2025-07-27 17:21:34,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:22:04] 2025-07-27 17:21:34,496 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:34,623 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:34,642 | INFO     | all job control threads have been joined
[2025-07-27 19:22:04] 2025-07-27 17:21:34,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:34,873 | INFO     | [data] control thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:34,879 | INFO     | [payload] control thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,002 | INFO     | [job] validate thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,081 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,117 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,187 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,232 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,399 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:22:04] 2025-07-27 17:21:35,647 | INFO     | [job] control thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:35,852 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:36,078 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:36,177 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:22:04] 2025-07-27 17:21:36,438 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:40,183 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:22:04] 2025-07-27 17:21:40,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22400746063680)>', '<ExcThread(monitor, started 22400504653568)>']
[2025-07-27 19:22:04] 2025-07-27 17:21:45,433 | INFO     | all workflow threads have been joined
[2025-07-27 19:22:04] 2025-07-27 17:21:45,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:22:04] 2025-07-27 17:21:45,433 | INFO     | traces error code: 0
[2025-07-27 19:22:04] 2025-07-27 17:21:45,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:22:04] 2025-07-27 17:22:03,907 | INFO     | PID=750057 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 19:22:04] 2025-07-27 17:22:03,909 | INFO     | .. there are 22 such processes running
[2025-07-27 19:22:04] 2025-07-27 17:22:03,909 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:22:04] 2025-07-27 17:22:03,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:22:04] 2025-07-27 17:22:03,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:22:04] 2025-07-27 17:22:03,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:22:04] 2025-07-27 17:22:03,909 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 19:22:04] 2025-07-27 17:22:03,909 | INFO     | [monitor] control thread has ended
[2025-07-27 19:22:04] 2025-07-27 17:22:04,055 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:22:04] 2025-07-27 17:22:04,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:22:04] 2025-07-27 17:22:04,063 [wrapper] pilotpid: 750057
[2025-07-27 19:22:04] 2025-07-27 17:22:04,068 [wrapper] Pilot exit status: 0
[2025-07-27 19:22:04] 2025-07-27 17:22:04,092 [wrapper] pandaids: 6744949663
[2025-07-27 19:22:04] 2025-07-27 17:22:04,239 [wrapper] cleanup supervisor_pilot 1637810 750058
[2025-07-27 19:22:04] 2025-07-27 17:22:04,243 [wrapper] Test setup, not cleaning
[2025-07-27 19:22:04] 2025-07-27 17:22:04,247 [wrapper] apfmon messages muted
[2025-07-27 19:22:04] 2025-07-27 17:22:04,252 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:22:04] 2025-07-27 17:22:04,256 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:22:04]  *** Error codes and diagnostics ***
[2025-07-27 19:22:04]     "exeErrorCode": 0,
[2025-07-27 19:22:04]     "exeErrorDiag": "",
[2025-07-27 19:22:04]     "pilotErrorCode": 0,
[2025-07-27 19:22:04]     "pilotErrorDiag": "",
[2025-07-27 19:22:04]  *** Listing of results directory ***
[2025-07-27 19:22:04] total 351760
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc    530466 Jul 25 05:17 pilot3.tar.gz
[2025-07-27 19:22:04] -rwx------ 1 boinc boinc     36292 Jul 25 05:30 runpilot2-wrapper.sh
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc      5112 Jul 25 05:30 queuedata.json
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc       100 Jul 27 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:22:04] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 16:15 run_atlas
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc       105 Jul 27 16:15 job.xml
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc      6689 Jul 27 16:15 init_data.xml
[2025-07-27 19:22:04] -rw-r--r-- 2 boinc boinc 146585486 Jul 27 16:15 EVNT.45743347._000856.pool.root.1
[2025-07-27 19:22:04] -rw-r--r-- 2 boinc boinc     15095 Jul 27 16:15 start_atlas.sh
[2025-07-27 19:22:04] drwxrwx--x 2 boinc boinc      4096 Jul 27 16:15 shared
[2025-07-27 19:22:04] -rw-r--r-- 2 boinc boinc    542893 Jul 27 16:15 input.tar.gz
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc         0 Jul 27 16:15 boinc_lockfile
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc      2562 Jul 27 16:15 pandaJob.out
[2025-07-27 19:22:04] -rw------- 1 boinc boinc    980109 Jul 27 16:16 agis_schedconf.cvmfs.json
[2025-07-27 19:22:04] drwx------ 4 boinc boinc      4096 Jul 27 16:16 pilot3
[2025-07-27 19:22:04] -rw------- 1 boinc boinc 207048706 Jul 27 19:20 HITS.45743349._015429.pool.root.1
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc       530 Jul 27 19:20 boinc_task_state.xml
[2025-07-27 19:22:04] -rw------- 1 boinc boinc      1031 Jul 27 19:21 memory_monitor_summary.json
[2025-07-27 19:22:04] -rw------- 1 boinc boinc   1593052 Jul 27 19:21 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:22:04] -rw------- 1 boinc boinc    312445 Jul 27 19:21 log.45743349._015429.job.log.tgz.1
[2025-07-27 19:22:04] -rw------- 1 boinc boinc        95 Jul 27 19:21 pilot_heartbeat.json
[2025-07-27 19:22:04] -rw------- 1 boinc boinc      7790 Jul 27 19:21 heartbeat.json
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc      8192 Jul 27 19:21 boinc_mmap_file
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc        27 Jul 27 19:21 wrapper_checkpoint.txt
[2025-07-27 19:22:04] -rw------- 1 boinc boinc       892 Jul 27 19:22 pilotlog.txt
[2025-07-27 19:22:04] -rw------- 1 boinc boinc   1032140 Jul 27 19:22 log.45743349._015429.job.log.1
[2025-07-27 19:22:04] -rw------- 1 boinc boinc       357 Jul 27 19:22 output.list
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc       620 Jul 27 19:22 runtime_log
[2025-07-27 19:22:04] -rw------- 1 boinc boinc   1361920 Jul 27 19:22 result.tar.gz
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc      9042 Jul 27 19:22 runtime_log.err
[2025-07-27 19:22:04] -rw------- 1 boinc boinc       666 Jul 27 19:22 bfxLDmmJOz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmnOyKDmkcC9Tn.diag
[2025-07-27 19:22:04] -rw-r--r-- 1 boinc boinc     20920 Jul 27 19:22 stderr.txt
[2025-07-27 19:22:04] HITS file was successfully produced:
[2025-07-27 19:22:04] -rw------- 1 boinc boinc 207048706 Jul 27 19:20 shared/HITS.pool.root.1
[2025-07-27 19:22:04]  *** Contents of shared directory: ***
[2025-07-27 19:22:04] total 347240
[2025-07-27 19:22:04] -rw-r--r-- 2 boinc boinc 146585486 Jul 27 16:15 ATLAS.root_0
[2025-07-27 19:22:04] -rw-r--r-- 2 boinc boinc     15095 Jul 27 16:15 start_atlas.sh
[2025-07-27 19:22:04] -rw-r--r-- 2 boinc boinc    542893 Jul 27 16:15 input.tar.gz
[2025-07-27 19:22:04] -rw------- 1 boinc boinc 207048706 Jul 27 19:20 HITS.pool.root.1
[2025-07-27 19:22:04] -rw------- 1 boinc boinc   1361920 Jul 27 19:22 result.tar.gz
19:22:06 (746063): run_atlas exited; CPU time 43592.703316
19:22:06 (746063): called boinc_finish(0)

</stderr_txt>
]]>

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