Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 06:27:04 (17912): Detected: vboxwrapper 26206
2025-07-25 06:27:04 (17912): Detected: BOINC client v8.2.4
2025-07-25 06:27:05 (17912): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-07-25 06:27:05 (17912): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 06:27:05 (17912): Create VM. (boinc_fc054ce3c13fa918, slot#5)
2025-07-25 06:27:06 (17912): Setting Memory Size for VM. (4400MB)
2025-07-25 06:27:06 (17912): Setting CPU Count for VM. (4)
2025-07-25 06:27:06 (17912): Setting Chipset Options for VM.
2025-07-25 06:27:07 (17912): Setting Graphics Controller Options for VM.
2025-07-25 06:27:07 (17912): Setting Boot Options for VM.
2025-07-25 06:27:07 (17912): Setting Network Configuration for NAT.
2025-07-25 06:27:08 (17912): Enabling VM Network Access.
2025-07-25 06:27:08 (17912): Disabling USB Support for VM.
2025-07-25 06:27:08 (17912): Disabling COM Port Support for VM.
2025-07-25 06:27:08 (17912): Disabling LPT Port Support for VM.
2025-07-25 06:27:09 (17912): Disabling Audio Support for VM.
2025-07-25 06:27:09 (17912): Disabling Clipboard Support for VM.
2025-07-25 06:27:09 (17912): Disabling Drag and Drop Support for VM.
2025-07-25 06:27:09 (17912): Adding storage controller(s) to VM.
2025-07-25 06:27:10 (17912): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 06:27:13 (17912): Adding VirtualBox Guest Additions to VM.
2025-07-25 06:27:13 (17912): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 06:27:13 (17912): forwarding host port 61942 to guest port 80
2025-07-25 06:27:13 (17912): Enabling remote desktop for VM.
2025-07-25 06:27:14 (17912): Required extension pack not installed, remote desktop not enabled.
2025-07-25 06:27:14 (17912): Enabling shared directory for VM.
2025-07-25 06:27:14 (17912): Starting VM using VBoxManage interface. (boinc_fc054ce3c13fa918, slot#5)
2025-07-25 06:27:20 (17912): Successfully started VM. (PID = '10908')
2025-07-25 06:27:20 (17912): Reporting VM Process ID to BOINC.
2025-07-25 06:27:20 (17912): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-25 06:27:20 (17912): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 06:27:20 (17912): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 06:27:20 (17912): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 06:27:20 (17912): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 06:27:20 (17912): Detected: Web Application Enabled (http://localhost:61942)
2025-07-25 06:27:20 (17912): Preference change detected
2025-07-25 06:27:20 (17912): Setting CPU throttle for VM. (90%)
2025-07-25 06:27:20 (17912): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 06:27:22 (17912): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 06:27:22 (17912): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 06:27:25 (17912): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 06:27:25 (17912): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 06:27:25 (17912): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 06:27:31 (17912): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 06:27:31 (17912): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 06:27:35 (17912): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.000063 main     Log opened 2025-07-25T06:27:33.077194000Z
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.000124 main     OS Product: Linux
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.000150 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.000169 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.000187 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.000188 main     Process ID: 1302
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.000188 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 06:27:35 (17912): Guest Log: 00:00:00.001122 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 06:27:35 (17912): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 06:27:35 (17912): Guest Log: [INFO] Mounting shared directory
2025-07-25 06:27:35 (17912): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 06:27:43 (17912): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 06:27:43 (17912): Guest Log: [INFO] Detected branch: prod
2025-07-25 06:27:43 (17912): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 06:27:43 (17912): Guest Log: Copying input files
2025-07-25 06:27:44 (17912): Guest Log: Copied input files into RunAtlas.
2025-07-25 06:27:44 (17912): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 06:27:44 (17912): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 06:27:44 (17912): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 06:27:44 (17912): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 06:27:45 (17912): Guest Log: 00:00:10.053625 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 887 435 000ns (GuestNow=1 753 439 264 967 588 000 ns GuestLast=1 753 424 853 080 153 000 ns fSetTimeLastLoop=true )
2025-07-25 06:27:52 (17912): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 06:27:52 (17912): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 06:27:52 (17912): Guest Log: 2.6.3.0 1585 0 32180 148738 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 06:27:52 (17912): Guest Log: copied the webapp to /var/www
2025-07-25 06:27:52 (17912): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-25 06:27:52 (17912): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-25 06:27:53 (17912): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 06:27:53 (17912): Guest Log:  *** Starting ATLAS job. (PandaID=6744948981 taskID=45743349) ***
2025-07-25 07:20:19 (17912): VM state change detected. (old = 'running', new = 'paused')
2025-07-25 07:20:40 (17912): VM state change detected. (old = 'paused', new = 'running')
2025-07-25 08:07:46 (17912): Status Report: Elapsed Time: '6000.000000'
2025-07-25 08:07:46 (17912): Status Report: CPU Time: '20528.187500'
2025-07-25 08:09:56 (17912): Guest Log:  *** Job finished ***
2025-07-25 08:09:56 (17912): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:26,349 | INFO     | [data] copytool_in thread has finished
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:26,527 | INFO     | [payload] failed_post thread has finished
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:29,302 | INFO     | [data] queue_monitor thread has finished
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:29,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555814369088)>', '<ExcThread(monitor, started 140555514259200)>']
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:29,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:29,987 | INFO     | [monitor] control thread has ended
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,617 | INFO     | all workflow threads have been joined
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,617 | INFO     | end of generic workflow (traces error code: 0)
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,617 | INFO     | traces error code: 0
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,668 [wrapper] ==== pilot stdout END ====
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,670 [wrapper] ==== wrapper stdout RESUME ====
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,672 [wrapper] pilotpid: 5906
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,674 [wrapper] Pilot exit status: 0
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,823 [wrapper] pandaids: 6744948981
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,845 [wrapper] cleanup supervisor_pilot  2022 5907
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,848 [wrapper] Test setup, not cleaning
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,850 [wrapper] apfmon messages muted
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,852 [wrapper] ==== wrapper stdout END ====
2025-07-25 08:09:56 (17912): Guest Log: 2025-07-25 12:09:34,855 [wrapper] ==== wrapper stderr END ====
2025-07-25 08:09:56 (17912): Guest Log:  *** Error codes and diagnostics ***
2025-07-25 08:09:56 (17912): Guest Log:     "exeErrorCode": 0,
2025-07-25 08:09:56 (17912): Guest Log:     "exeErrorDiag": "",
2025-07-25 08:09:56 (17912): Guest Log:     "pilotErrorCode": 0,
2025-07-25 08:09:56 (17912): Guest Log:     "pilotErrorDiag": "",
2025-07-25 08:09:56 (17912): Guest Log:  *** Listing of results directory ***
2025-07-25 08:09:56 (17912): Guest Log: total 206136
2025-07-25 08:09:56 (17912): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 25 02:32 pilot3.tar.gz
2025-07-25 08:09:56 (17912): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 25 02:46 runpilot2-wrapper.sh
2025-07-25 08:09:56 (17912): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 25 02:46 queuedata.json
2025-07-25 08:09:56 (17912): Guest Log: -rwxr-xr-x. 1 atlas atlas     11782 Jul 25 10:27 init_data.xml
2025-07-25 08:09:56 (17912): Guest Log: -rwxr-xr-x. 1 atlas atlas    542890 Jul 25 10:27 input.tar.gz
2025-07-25 08:09:56 (17912): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 25 10:27 start_atlas.sh
2025-07-25 08:09:56 (17912): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 25 10:27 EVNT.45743347._000825.pool.root.1 -> /data/./ATLAS.root_0
2025-07-25 08:09:56 (17912): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Jul 25 10:27 pandaJob.out
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas    979717 Jul 25 10:28 agis_schedconf.cvmfs.json
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 25 10:28 agis_ddmendpoints.agis.ALL.json
2025-07-25 08:09:56 (17912): Guest Log: drwx------. 4 atlas atlas      4096 Jul 25 10:28 pilot3
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas 205712317 Jul 25 12:08 HITS.45743349._014878.pool.root.1
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas      1029 Jul 25 12:09 memory_monitor_summary.json
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas        95 Jul 25 12:09 pilot_heartbeat.json
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas    251396 Jul 25 12:09 log.45743349._014878.job.log.tgz.1
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas      7775 Jul 25 12:09 heartbeat.json
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas      4612 Jul 25 12:09 pilotlog.txt
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas    531873 Jul 25 12:09 log.45743349._014878.job.log.1
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas       357 Jul 25 12:09 output.list
2025-07-25 08:09:56 (17912): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 25 12:09 runtime_log
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas    798720 Jul 25 12:09 result.tar.gz
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas       656 Jul 25 12:09 wwRMDmUdNz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbVOLDmoGocEm.diag
2025-07-25 08:09:56 (17912): Guest Log: -rw-r--r--. 1 atlas atlas      8592 Jul 25 12:09 runtime_log.err
2025-07-25 08:09:56 (17912): Guest Log: Looking for outputfile HITS.45743349._014878.pool.root.1
2025-07-25 08:09:56 (17912): Guest Log: HITS file was successfully produced
2025-07-25 08:09:56 (17912): Guest Log: -rw-------. 1 atlas atlas 205712317 Jul 25 12:08 /home/atlas/RunAtlas/HITS.45743349._014878.pool.root.1
2025-07-25 08:09:57 (17912): Guest Log: Successfully finished the ATLAS job!
2025-07-25 08:09:57 (17912): Guest Log: Copying the results back to the shared directory!
2025-07-25 08:09:57 (17912): Guest Log:  *** Contents of shared directory: ***
2025-07-25 08:09:57 (17912): Guest Log: total 344468
2025-07-25 08:09:57 (17912): Guest Log: -rwxrwxrwx. 1 root root 145648616 Jul 25 10:27 ATLAS.root_0
2025-07-25 08:09:57 (17912): Guest Log: -rwxrwxrwx. 1 root root 205712317 Jul 25  2025 HITS.pool.root.1
2025-07-25 08:09:57 (17912): Guest Log: -rwxrwxrwx. 1 root root     11782 Jul 25 10:27 init_data.xml
2025-07-25 08:09:57 (17912): Guest Log: -rwxrwxrwx. 1 root root    542890 Jul 25 09:40 input.tar.gz
2025-07-25 08:09:57 (17912): Guest Log: -rwxrwxrwx. 1 root root    798720 Jul 25  2025 result.tar.gz
2025-07-25 08:09:57 (17912): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 25 09:40 start_atlas.sh
2025-07-25 08:09:57 (17912): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-25 08:09:57 (17912): VM Completion File Detected.
2025-07-25 08:09:57 (17912): Powering off VM.
2025-07-25 08:09:57 (17912): Successfully stopped VM.
2025-07-25 08:09:57 (17912): Deregistering VM. (boinc_fc054ce3c13fa918, slot#5)
2025-07-25 08:09:57 (17912): Removing network bandwidth throttle group from VM.
2025-07-25 08:09:57 (17912): Removing VM from VirtualBox.
08:10:03 (17912): called boinc_finish(0)

</stderr_txt>
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