Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:54:29 (880813): wrapper (7.7.26015): starting
04:54:29 (880813): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 04:54:29] Arguments: --nthreads 8
[2025-07-25 04:54:29] Threads: 8
[2025-07-25 04:54:29] Checking for CVMFS
[2025-07-25 04:54:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 04:54:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 04:54:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 04:54:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 04:54:30] 2.12.6.0 3531214 15262 281460 148732 3 283 25265007 32935936 21543 16776704 0 14642778 99.680 14314328 8640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 04:54:30] CVMFS is ok
[2025-07-25 04:54:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 04:54:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 04:54:30] Further information can be found at the LHC@home message board.
[2025-07-25 04:54:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 04:54:30] Checking for apptainer binary...
[2025-07-25 04:54:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 04:54:30] Running /usr/bin/apptainer --version
[2025-07-25 04:54:30] apptainer version 1.4.1-1.el9
[2025-07-25 04:54:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 04:54:30] c6-12-25-2.aglt2.org
[2025-07-25 04:54:30] apptainer works
[2025-07-25 04:54:30] Set ATHENA_PROC_NUMBER=8
[2025-07-25 04:54:30] Set ATHENA_CORE_NUMBER=8
[2025-07-25 04:54:30] Starting ATLAS job with PandaID=6744948713
[2025-07-25 04:54:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 10:38:38]  *** The last 200 lines of the pilot log: ***
[2025-07-25 10:38:38] 2025-07-25 14:38:01,320 | INFO     | monitor loop #1130: job 0:6744948713 is in state 'finished'
[2025-07-25 10:38:38] 2025-07-25 14:38:01,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 10:38:38] 2025-07-25 14:38:01,388 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 10:38:38] 2025-07-25 14:38:01,546 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.9996354166664
[2025-07-25 10:38:38] 2025-07-25 14:38:01,688 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744948713/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 10:38:38] 2025-07-25 14:38:01,702 | INFO     | extracted standard info from prmon json
[2025-07-25 10:38:38] 2025-07-25 14:38:01,703 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 10:38:38] 2025-07-25 14:38:01,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 10:38:38] 2025-07-25 14:38:01,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 10:38:38] 2025-07-25 14:38:01,704 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 10:38:38] 2025-07-25 14:38:01,756 | INFO     | fitting pss+swap vs Time
[2025-07-25 10:38:38] 2025-07-25 14:38:01,758 | INFO     | sum of square deviations: 11762490963.142843
[2025-07-25 10:38:38] 2025-07-25 14:38:01,775 | INFO     | sum of deviations: 98098027593.92845
[2025-07-25 10:38:38] 2025-07-25 14:38:01,780 | INFO     | mean x: 1753443978.642857
[2025-07-25 10:38:38] 2025-07-25 14:38:01,781 | INFO     | mean y: 2095749.9077380951
[2025-07-25 10:38:38] 2025-07-25 14:38:01,781 | INFO     | -- intersect: -14621456041.995628
[2025-07-25 10:38:38] 2025-07-25 14:38:01,781 | INFO     | intersect: -14621456041.995628
[2025-07-25 10:38:38] 2025-07-25 14:38:01,783 | INFO     | chi2: 3.4531321815879346
[2025-07-25 10:38:38] 2025-07-25 14:38:01,789 | INFO     | sum of square deviations: 11245174973.039251
[2025-07-25 10:38:38] 2025-07-25 14:38:01,835 | INFO     | sum of deviations: 122267250690.1994
[2025-07-25 10:38:38] 2025-07-25 14:38:01,835 | INFO     | mean x: 1753443826.145015
[2025-07-25 10:38:38] 2025-07-25 14:38:01,836 | INFO     | mean y: 2102806.1208459213
[2025-07-25 10:38:38] 2025-07-25 14:38:01,840 | INFO     | -- intersect: -19062852285.85953
[2025-07-25 10:38:38] 2025-07-25 14:38:01,841 | INFO     | intersect: -19062852285.85953
[2025-07-25 10:38:38] 2025-07-25 14:38:01,842 | INFO     | chi2: 2.6357199079382023
[2025-07-25 10:38:38] 2025-07-25 14:38:01,842 | INFO     | current chi2=2.6357199079382023 (change=23.671618422490923 %)
[2025-07-25 10:38:38] 2025-07-25 14:38:01,843 | INFO     | right removable region: 330
[2025-07-25 10:38:38] 2025-07-25 14:38:01,848 | INFO     | sum of square deviations: 11245145693.039248
[2025-07-25 10:38:38] 2025-07-25 14:38:01,863 | INFO     | sum of deviations: 32593847482.61025
[2025-07-25 10:38:38] 2025-07-25 14:38:01,863 | INFO     | mean x: 1753444131.145015
[2025-07-25 10:38:38] 2025-07-25 14:38:01,872 | INFO     | mean y: 2115003.9456193354
[2025-07-25 10:38:38] 2025-07-25 14:38:01,873 | INFO     | -- intersect: -5080210484.749068
[2025-07-25 10:38:38] 2025-07-25 14:38:01,873 | INFO     | intersect: -5080210484.749068
[2025-07-25 10:38:38] 2025-07-25 14:38:01,875 | INFO     | chi2: 1.3407644389768227
[2025-07-25 10:38:38] 2025-07-25 14:38:01,875 | INFO     | current chi2=1.3407644389768227 (change=61.17251328733476 %)
[2025-07-25 10:38:38] 2025-07-25 14:38:01,880 | INFO     | sum of square deviations: 10743196060.432507
[2025-07-25 10:38:38] 2025-07-25 14:38:01,899 | INFO     | sum of deviations: 6012127120.677914
[2025-07-25 10:38:38] 2025-07-25 14:38:01,955 | INFO     | mean x: 1753444283.6472392
[2025-07-25 10:38:38] 2025-07-25 14:38:01,956 | INFO     | mean y: 2123067.475460123
[2025-07-25 10:38:38] 2025-07-25 14:38:01,956 | INFO     | -- intersect: -979142644.6099263
[2025-07-25 10:38:38] 2025-07-25 14:38:01,956 | INFO     | intersect: -979142644.6099263
[2025-07-25 10:38:38] 2025-07-25 14:38:01,958 | INFO     | chi2: 1.0366390031903907
[2025-07-25 10:38:38] 2025-07-25 14:38:01,958 | INFO     | current chi2=1.0366390031903907 (change=22.682987924300797 %)
[2025-07-25 10:38:38] 2025-07-25 14:38:01,959 | INFO     | left removable region: 20
[2025-07-25 10:38:38] 2025-07-25 14:38:01,964 | INFO     | sum of square deviations: 9237742168.067713
[2025-07-25 10:38:38] 2025-07-25 14:38:01,990 | INFO     | sum of deviations: 20757281106.42579
[2025-07-25 10:38:38] 2025-07-25 14:38:01,991 | INFO     | mean x: 1753444405.6548388
[2025-07-25 10:38:38] 2025-07-25 14:38:01,991 | INFO     | mean y: 2134066.1161290323
[2025-07-25 10:38:38] 2025-07-25 14:38:01,991 | INFO     | -- intersect: -3937869645.881865
[2025-07-25 10:38:38] 2025-07-25 14:38:01,992 | INFO     | intersect: -3937869645.881865
[2025-07-25 10:38:38] 2025-07-25 14:38:01,997 | INFO     | chi2: 0.161052324666728
[2025-07-25 10:38:38] 2025-07-25 14:38:01,998 | INFO     | -- intersect: -3937869645.881865
[2025-07-25 10:38:38] 2025-07-25 14:38:01,998 | INFO     | current memory leak: 2.25 B/s (using 310 data points, chi2=0.16)
[2025-07-25 10:38:38] 2025-07-25 14:38:02,005 | INFO     | could have reported an average CPU frequency of 1037 MHz (15 samples)
[2025-07-25 10:38:38] 2025-07-25 14:38:02,006 | INFO     | ..............................
[2025-07-25 10:38:38] 2025-07-25 14:38:02,006 | INFO     | . Timing measurements:
[2025-07-25 10:38:38] 2025-07-25 14:38:02,006 | INFO     | . get job = 0 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,006 | INFO     | . initial setup = 4 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,007 | INFO     | . payload setup = 18 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,007 | INFO     | . stage-in = 0 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,007 | INFO     | . payload execution = 20501 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,007 | INFO     | . stage-out = 7 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,007 | INFO     | . log creation = 0 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,008 | INFO     | ..............................
[2025-07-25 10:38:38] 2025-07-25 14:38:02,776 | INFO     | 
[2025-07-25 10:38:38] 2025-07-25 14:38:02,777 | INFO     | job summary report
[2025-07-25 10:38:38] 2025-07-25 14:38:02,778 | INFO     | --------------------------------------------------
[2025-07-25 10:38:38] 2025-07-25 14:38:02,778 | INFO     | PanDA job id: 6744948713
[2025-07-25 10:38:38] 2025-07-25 14:38:02,778 | INFO     | task id: 45743349
[2025-07-25 10:38:38] 2025-07-25 14:38:02,778 | INFO     | errors: (none)
[2025-07-25 10:38:38] 2025-07-25 14:38:02,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 10:38:38] 2025-07-25 14:38:02,779 | INFO     | pilot state: finished 
[2025-07-25 10:38:38] 2025-07-25 14:38:02,779 | INFO     | transexitcode: 0
[2025-07-25 10:38:38] 2025-07-25 14:38:02,779 | INFO     | exeerrorcode: 0
[2025-07-25 10:38:38] 2025-07-25 14:38:02,779 | INFO     | exeerrordiag: 
[2025-07-25 10:38:38] 2025-07-25 14:38:02,833 | INFO     | exitcode: 0
[2025-07-25 10:38:38] 2025-07-25 14:38:02,834 | INFO     | exitmsg: OK
[2025-07-25 10:38:38] 2025-07-25 14:38:02,834 | INFO     | cpuconsumptiontime: 126588 s
[2025-07-25 10:38:38] 2025-07-25 14:38:02,834 | INFO     | nevents: 400
[2025-07-25 10:38:38] 2025-07-25 14:38:02,835 | INFO     | neventsw: 0
[2025-07-25 10:38:38] 2025-07-25 14:38:02,835 | INFO     | pid: 894312
[2025-07-25 10:38:38] 2025-07-25 14:38:02,835 | INFO     | pgrp: 894312
[2025-07-25 10:38:38] 2025-07-25 14:38:02,835 | INFO     | corecount: 8
[2025-07-25 10:38:38] 2025-07-25 14:38:02,835 | INFO     | event service: False
[2025-07-25 10:38:38] 2025-07-25 14:38:02,836 | INFO     | sizes: {0: 2397246, 1: 2397330, 2: 2397529, 13: 2397847, 24: 2397847, 20524: 2431213, 20525: 2431340, 20533: 2440394, 20535: 2440450, 20551: 2440644}
[2025-07-25 10:38:38] 2025-07-25 14:38:02,836 | INFO     | --------------------------------------------------
[2025-07-25 10:38:38] 2025-07-25 14:38:02,836 | INFO     | 
[2025-07-25 10:38:38] 2025-07-25 14:38:02,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 10:38:38] 2025-07-25 14:38:02,998 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:02,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:02,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:02,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:02,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,000 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 10:38:38] 2025-07-25 14:38:03,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 10:38:38] 2025-07-25 14:38:03,008 | INFO     | job 6744948713 has completed (purged errors)
[2025-07-25 10:38:38] 2025-07-25 14:38:03,011 | INFO     | overall cleanup function is called
[2025-07-25 10:38:38] 2025-07-25 14:38:04,094 | INFO     | --- collectZombieJob: --- 10, [894312]
[2025-07-25 10:38:38] 2025-07-25 14:38:04,094 | INFO     | zombie collector waiting for pid 894312
[2025-07-25 10:38:38] 2025-07-25 14:38:04,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 10:38:38] 2025-07-25 14:38:04,095 | INFO     | collected zombie processes
[2025-07-25 10:38:38] 2025-07-25 14:38:04,095 | INFO     | will attempt to kill all subprocesses of pid=894312
[2025-07-25 10:38:38] 2025-07-25 14:38:04,374 | INFO     | PID=884740 has CPU usage=18.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 10:38:38] 2025-07-25 14:38:04,374 | INFO     | .. there are 29 such processes running
[2025-07-25 10:38:38] 2025-07-25 14:38:05,343 | INFO     | process IDs to be killed: [894312] (in reverse order)
[2025-07-25 10:38:38] 2025-07-25 14:38:05,681 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 10:38:38] 2025-07-25 14:38:05,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 10:38:38] 2025-07-25 14:38:05,732 | INFO     | did not find any defunct processes belonging to 894312
[2025-07-25 10:38:38] 2025-07-25 14:38:05,783 | INFO     | did not find any defunct processes belonging to 894312
[2025-07-25 10:38:38] 2025-07-25 14:38:05,784 | INFO     | ready for new job
[2025-07-25 10:38:38] 2025-07-25 14:38:05,784 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 10:38:38] 2025-07-25 14:38:05,789 | INFO     | ***************************************
[2025-07-25 10:38:38] 2025-07-25 14:38:05,790 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 10:38:38] 2025-07-25 14:38:05,791 | INFO     | ***************************************
[2025-07-25 10:38:38] 2025-07-25 14:38:05,791 | INFO     | 
[2025-07-25 10:38:38] 2025-07-25 14:38:05,823 | INFO     | architecture information:
[2025-07-25 10:38:38] 2025-07-25 14:38:05,824 | INFO     | executing command: cat /etc/os-release
[2025-07-25 10:38:38] 2025-07-25 14:38:05,874 | INFO     | cat /etc/os-release:
[2025-07-25 10:38:38] NAME="CentOS Linux"
[2025-07-25 10:38:38] VERSION="7 (Core)"
[2025-07-25 10:38:38] ID="centos"
[2025-07-25 10:38:38] ID_LIKE="rhel fedora"
[2025-07-25 10:38:38] VERSION_ID="7"
[2025-07-25 10:38:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 10:38:38] ANSI_COLOR="0;31"
[2025-07-25 10:38:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 10:38:38] HOME_URL="https://www.centos.org/"
[2025-07-25 10:38:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 10:38:38] 
[2025-07-25 10:38:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 10:38:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 10:38:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 10:38:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 10:38:38] 
[2025-07-25 10:38:38] 2025-07-25 14:38:05,875 | INFO     | ***************************************
[2025-07-25 10:38:38] 2025-07-25 14:38:06,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 10:38:38] 2025-07-25 14:38:06,528 | INFO     | sufficient remaining disk space (95918489600 B)
[2025-07-25 10:38:38] 2025-07-25 14:38:06,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 10:38:38] 2025-07-25 14:38:06,530 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 10:38:38] 2025-07-25 14:38:06,530 | INFO     | update_server=False
[2025-07-25 10:38:38] 2025-07-25 14:38:06,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 10:38:38] 2025-07-25 14:38:06,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 10:38:38] 2025-07-25 14:38:06,735 | INFO     | all payload control threads have been joined
[2025-07-25 10:38:38] 2025-07-25 14:38:06,783 | INFO     | all data control threads have been joined
[2025-07-25 10:38:38] 2025-07-25 14:38:07,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 10:38:38] 2025-07-25 14:38:07,365 | INFO     | aborting loop
[2025-07-25 10:38:38] 2025-07-25 14:38:07,536 | INFO     | [job] retrieve thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:07,623 | INFO     | [payload] failed_post thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:07,749 | INFO     | [payload] control thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:07,789 | INFO     | [data] control thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:07,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 10:38:38] 2025-07-25 14:38:07,904 | INFO     | [job] validate thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:07,920 | INFO     | [data] copytool_in thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:07,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 10:38:38] 2025-07-25 14:38:08,014 | INFO     | all job control threads have been joined
[2025-07-25 10:38:38] 2025-07-25 14:38:08,040 | INFO     | [payload] validate_post thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:08,372 | INFO     | [job] job monitor thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:08,614 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:08,804 | INFO     | [job] queue monitor thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:08,903 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:08,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:09,007 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:09,020 | INFO     | [job] control thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:09,963 | INFO     | [data] copytool_out thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:10,540 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 10:38:38] 2025-07-25 14:38:12,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716417255232)>', '<ExcThread(monitor, started 139715479070464)>']
[2025-07-25 10:38:38] 2025-07-25 14:38:17,345 | INFO     | all workflow threads have been joined
[2025-07-25 10:38:38] 2025-07-25 14:38:17,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 10:38:38] 2025-07-25 14:38:17,346 | INFO     | traces error code: 0
[2025-07-25 10:38:38] 2025-07-25 14:38:17,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 10:38:38] 2025-07-25 14:38:37,902 | INFO     | PID=884740 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 10:38:38] 2025-07-25 14:38:37,904 | INFO     | .. there are 29 such processes running
[2025-07-25 10:38:38] 2025-07-25 14:38:37,904 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 10:38:38] 2025-07-25 14:38:37,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 10:38:38] 2025-07-25 14:38:37,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 10:38:38] 2025-07-25 14:38:37,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 10:38:38] 2025-07-25 14:38:37,905 | INFO     | [monitor] control thread has ended
[2025-07-25 10:38:38] 2025-07-25 14:38:38,343 [wrapper] ==== pilot stdout END ====
[2025-07-25 10:38:38] 2025-07-25 14:38:38,352 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 10:38:38] 2025-07-25 14:38:38,360 [wrapper] pilotpid: 884740
[2025-07-25 10:38:38] 2025-07-25 14:38:38,368 [wrapper] Pilot exit status: 0
[2025-07-25 10:38:38] 2025-07-25 14:38:38,392 [wrapper] pandaids: 6744948713
[2025-07-25 10:38:38] 2025-07-25 14:38:38,531 [wrapper] cleanup supervisor_pilot 1568318 884741
[2025-07-25 10:38:38] 2025-07-25 14:38:38,539 [wrapper] Test setup, not cleaning
[2025-07-25 10:38:38] 2025-07-25 14:38:38,545 [wrapper] apfmon messages muted
[2025-07-25 10:38:38] 2025-07-25 14:38:38,553 [wrapper] ==== wrapper stdout END ====
[2025-07-25 10:38:38] 2025-07-25 14:38:38,560 [wrapper] ==== wrapper stderr END ====
[2025-07-25 10:38:38]  *** Error codes and diagnostics ***
[2025-07-25 10:38:38]     "exeErrorCode": 0,
[2025-07-25 10:38:38]     "exeErrorDiag": "",
[2025-07-25 10:38:38]     "pilotErrorCode": 0,
[2025-07-25 10:38:38]     "pilotErrorDiag": "",
[2025-07-25 10:38:38]  *** Listing of results directory ***
[2025-07-25 10:38:38] total 360764
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 22:09 pilot3.tar.gz
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 22:11 queuedata.json
[2025-07-25 10:38:38] -rwx------. 1 boincer umatlas     36292 Jul 24 22:12 runpilot2-wrapper.sh
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas       100 Jul 25 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 10:38:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 04:54 run_atlas
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas       105 Jul 25 04:54 job.xml
[2025-07-25 10:38:38] -rw-r--r--. 2 boincer umatlas 147037878 Jul 25 04:54 EVNT.45743347._000810.pool.root.1
[2025-07-25 10:38:38] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 04:54 start_atlas.sh
[2025-07-25 10:38:38] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 04:54 shared
[2025-07-25 10:38:38] -rw-r--r--. 2 boincer umatlas    542897 Jul 25 04:54 input.tar.gz
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas         0 Jul 25 04:54 boinc_lockfile
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 04:54 pandaJob.out
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas    979709 Jul 25 04:54 agis_schedconf.cvmfs.json
[2025-07-25 10:38:38] drwx------. 4 boincer umatlas      4096 Jul 25 04:54 pilot3
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas 214495096 Jul 25 10:35 HITS.45743349._014652.pool.root.1
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas       532 Jul 25 10:36 boinc_task_state.xml
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas      6857 Jul 25 10:36 init_data.xml
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas      1044 Jul 25 10:37 memory_monitor_summary.json
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas   1593052 Jul 25 10:37 agis_ddmendpoints.agis.ALL.json
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas    450398 Jul 25 10:37 log.45743349._014652.job.log.tgz.1
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas        95 Jul 25 10:37 pilot_heartbeat.json
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas      7833 Jul 25 10:38 heartbeat.json
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 10:38 boinc_mmap_file
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas        29 Jul 25 10:38 wrapper_checkpoint.txt
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas       822 Jul 25 10:38 pilotlog.txt
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas   1561315 Jul 25 10:38 log.45743349._014652.job.log.1
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas       357 Jul 25 10:38 output.list
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas       620 Jul 25 10:38 runtime_log
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas   2027520 Jul 25 10:38 result.tar.gz
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas       659 Jul 25 10:38 UCIKDmz5Mz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbSOLDmVQrXVo.diag
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas      8671 Jul 25 10:38 runtime_log.err
[2025-07-25 10:38:38] -rw-r--r--. 1 boincer umatlas     21336 Jul 25 10:38 stderr.txt
[2025-07-25 10:38:38] HITS file was successfully produced:
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas 214495096 Jul 25 10:35 shared/HITS.pool.root.1
[2025-07-25 10:38:38]  *** Contents of shared directory: ***
[2025-07-25 10:38:38] total 355592
[2025-07-25 10:38:38] -rw-r--r--. 2 boincer umatlas 147037878 Jul 25 04:54 ATLAS.root_0
[2025-07-25 10:38:38] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 04:54 start_atlas.sh
[2025-07-25 10:38:38] -rw-r--r--. 2 boincer umatlas    542897 Jul 25 04:54 input.tar.gz
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas 214495096 Jul 25 10:35 HITS.pool.root.1
[2025-07-25 10:38:38] -rw-------. 1 boincer umatlas   2027520 Jul 25 10:38 result.tar.gz
10:38:40 (880813): run_atlas exited; CPU time 128711.753591
10:38:40 (880813): called boinc_finish(0)

</stderr_txt>
]]>

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