Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:21:01 (14568): wrapper (7.7.26015): starting
08:21:01 (14568): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 08:21:01] Arguments: --nthreads 8
[2025-07-26 08:21:01] Threads: 8
[2025-07-26 08:21:01] Checking for CVMFS
[2025-07-26 08:21:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 08:21:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 08:21:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 08:21:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 08:21:03] 2.11.2.0 14465 107717 135000 148767 0 109 22704728 25165824 4360 130560 0 86027321 99.879 49928402 3163 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 08:21:03] CVMFS is ok
[2025-07-26 08:21:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 08:21:03] Checking for apptainer binary...
[2025-07-26 08:21:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 08:21:03] Running /usr/bin/apptainer --version
[2025-07-26 08:21:03] apptainer version 1.3.2-1.el7
[2025-07-26 08:21:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 08:21:05] cg-vwn249.simple-grid.lan
[2025-07-26 08:21:05] apptainer works
[2025-07-26 08:21:05] Set ATHENA_PROC_NUMBER=8
[2025-07-26 08:21:05] Set ATHENA_CORE_NUMBER=8
[2025-07-26 08:21:05] Starting ATLAS job with PandaID=6745336473
[2025-07-26 08:21:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 14:28:22]  *** The last 200 lines of the pilot log: ***
[2025-07-26 14:28:22] 2025-07-26 12:06:44,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 14:28:22] 2025-07-26 12:06:44,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 14:28:22] 2025-07-26 12:06:44,370 | INFO     | fitting pss+swap vs Time
[2025-07-26 14:28:22] 2025-07-26 12:06:44,371 | INFO     | sum of square deviations: 11867638328.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,374 | INFO     | sum of deviations: -37225895624.000015
[2025-07-26 14:28:22] 2025-07-26 12:06:44,375 | INFO     | mean x: 1753521187.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,375 | INFO     | mean y: 2572582.709198813
[2025-07-26 14:28:22] 2025-07-26 12:06:44,375 | INFO     | -- intersect: 5502942148.886849
[2025-07-26 14:28:22] 2025-07-26 12:06:44,375 | INFO     | intersect: 5502942148.886849
[2025-07-26 14:28:22] 2025-07-26 12:06:44,376 | INFO     | chi2: 2.577861701080246
[2025-07-26 14:28:22] 2025-07-26 12:06:44,376 | INFO     | sum of square deviations: 11347200663.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,380 | INFO     | sum of deviations: -13886006846.499996
[2025-07-26 14:28:22] 2025-07-26 12:06:44,380 | INFO     | mean x: 1753521034.5
[2025-07-26 14:28:22] 2025-07-26 12:06:44,380 | INFO     | mean y: 2579340.671686747
[2025-07-26 14:28:22] 2025-07-26 12:06:44,380 | INFO     | -- intersect: 2148430622.7368093
[2025-07-26 14:28:22] 2025-07-26 12:06:44,380 | INFO     | intersect: 2148430622.7368093
[2025-07-26 14:28:22] 2025-07-26 12:06:44,381 | INFO     | chi2: 1.8055076499901592
[2025-07-26 14:28:22] 2025-07-26 12:06:44,381 | INFO     | current chi2=1.8055076499901592 (change=29.96103517758279 %)
[2025-07-26 14:28:22] 2025-07-26 12:06:44,381 | INFO     | sum of square deviations: 10842205148.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,399 | INFO     | sum of deviations: -13947692761.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,399 | INFO     | mean x: 1753520882.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,399 | INFO     | mean y: 2579322.0428134557
[2025-07-26 14:28:22] 2025-07-26 12:06:44,399 | INFO     | -- intersect: 2258353878.8123174
[2025-07-26 14:28:22] 2025-07-26 12:06:44,400 | INFO     | intersect: 2258353878.8123174
[2025-07-26 14:28:22] 2025-07-26 12:06:44,400 | INFO     | chi2: 1.8048184625638135
[2025-07-26 14:28:22] 2025-07-26 12:06:44,400 | INFO     | current chi2=1.8048184625638135 (change=0.03817139331143088 %)
[2025-07-26 14:28:22] 2025-07-26 12:06:44,400 | INFO     | right removable region: 326
[2025-07-26 14:28:22] 2025-07-26 12:06:44,401 | INFO     | sum of square deviations: 11347200663.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,404 | INFO     | sum of deviations: -93400005155.50003
[2025-07-26 14:28:22] 2025-07-26 12:06:44,405 | INFO     | mean x: 1753521339.5
[2025-07-26 14:28:22] 2025-07-26 12:06:44,405 | INFO     | mean y: 2588943.954819277
[2025-07-26 14:28:22] 2025-07-26 12:06:44,405 | INFO     | -- intersect: 14436007988.320168
[2025-07-26 14:28:22] 2025-07-26 12:06:44,405 | INFO     | intersect: 14436007988.320168
[2025-07-26 14:28:22] 2025-07-26 12:06:44,405 | INFO     | chi2: 1.0734816909432534
[2025-07-26 14:28:22] 2025-07-26 12:06:44,405 | INFO     | current chi2=1.0734816909432534 (change=58.3576694400086 %)
[2025-07-26 14:28:22] 2025-07-26 12:06:44,406 | INFO     | sum of square deviations: 10842205148.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,409 | INFO     | sum of deviations: -95530336612.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,410 | INFO     | mean x: 1753521492.0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,410 | INFO     | mean y: 2589570.107033639
[2025-07-26 14:28:22] 2025-07-26 12:06:44,410 | INFO     | -- intersect: 15452813588.238337
[2025-07-26 14:28:22] 2025-07-26 12:06:44,410 | INFO     | intersect: 15452813588.238337
[2025-07-26 14:28:22] 2025-07-26 12:06:44,410 | INFO     | chi2: 1.0479359993737876
[2025-07-26 14:28:22] 2025-07-26 12:06:44,411 | INFO     | current chi2=1.0479359993737876 (change=2.3797044500143456 %)
[2025-07-26 14:28:22] 2025-07-26 12:06:44,411 | INFO     | left removable region: 20
[2025-07-26 14:28:22] 2025-07-26 12:06:44,411 | INFO     | sum of square deviations: 8884603792.5
[2025-07-26 14:28:22] 2025-07-26 12:06:44,414 | INFO     | sum of deviations: -53765394083.00001
[2025-07-26 14:28:22] 2025-07-26 12:06:44,414 | INFO     | mean x: 1753521461.5
[2025-07-26 14:28:22] 2025-07-26 12:06:44,415 | INFO     | mean y: 2591234.424836601
[2025-07-26 14:28:22] 2025-07-26 12:06:44,415 | INFO     | -- intersect: 10614068641.006739
[2025-07-26 14:28:22] 2025-07-26 12:06:44,415 | INFO     | intersect: 10614068641.006739
[2025-07-26 14:28:22] 2025-07-26 12:06:44,415 | INFO     | chi2: 0.23793305584213978
[2025-07-26 14:28:22] 2025-07-26 12:06:44,415 | INFO     | -- intersect: 10614068641.006739
[2025-07-26 14:28:22] 2025-07-26 12:06:44,416 | INFO     | current memory leak: -6.05 B/s (using 306 data points, chi2=0.24)
[2025-07-26 14:28:22] 2025-07-26 12:06:44,416 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | ..............................
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . Timing measurements:
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . get job = 0 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . initial setup = 2 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . payload setup = 13 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . stage-in = 0 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . payload execution = 20571 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . stage-out = 5 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | . log creation = 1 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,417 | INFO     | ..............................
[2025-07-26 14:28:22] 2025-07-26 12:06:44,568 | INFO     | 
[2025-07-26 14:28:22] 2025-07-26 12:06:44,568 | INFO     | job summary report
[2025-07-26 14:28:22] 2025-07-26 12:06:44,568 | INFO     | --------------------------------------------------
[2025-07-26 14:28:22] 2025-07-26 12:06:44,568 | INFO     | PanDA job id: 6745336473
[2025-07-26 14:28:22] 2025-07-26 12:06:44,568 | INFO     | task id: 45697472
[2025-07-26 14:28:22] 2025-07-26 12:06:44,568 | INFO     | errors: (none)
[2025-07-26 14:28:22] 2025-07-26 12:06:44,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | pilot state: finished 
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | transexitcode: 0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | exeerrorcode: 0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | exeerrordiag: 
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | exitcode: 0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | exitmsg: OK
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | cpuconsumptiontime: 80107 s
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | nevents: 400
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | neventsw: 0
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | pid: 25084
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | pgrp: 25084
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | corecount: 8
[2025-07-26 14:28:22] 2025-07-26 12:06:44,569 | INFO     | event service: False
[2025-07-26 14:28:22] 2025-07-26 12:06:44,570 | INFO     | sizes: {0: 2397276, 1: 2397475, 8: 2397737, 12: 2397765, 20589: 2430424, 20595: 2439608, 20699: 2439746}
[2025-07-26 14:28:22] 2025-07-26 12:06:44,570 | INFO     | --------------------------------------------------
[2025-07-26 14:28:22] 2025-07-26 12:06:44,570 | INFO     | 
[2025-07-26 14:28:22] 2025-07-26 12:06:44,570 | INFO     | executing command: ls -lF /var/lib/boinc/slots/22
[2025-07-26 14:28:22] 2025-07-26 12:06:45,088 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 14:28:22] 2025-07-26 12:06:45,090 | INFO     | job 6745336473 has completed (purged errors)
[2025-07-26 14:28:22] 2025-07-26 12:06:45,091 | INFO     | overall cleanup function is called
[2025-07-26 14:28:22] 2025-07-26 12:06:46,100 | INFO     | --- collectZombieJob: --- 10, [25084]
[2025-07-26 14:28:22] 2025-07-26 12:06:46,100 | INFO     | zombie collector waiting for pid 25084
[2025-07-26 14:28:22] 2025-07-26 12:06:46,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 14:28:22] 2025-07-26 12:06:46,100 | INFO     | collected zombie processes
[2025-07-26 14:28:22] 2025-07-26 12:06:46,100 | INFO     | will attempt to kill all subprocesses of pid=25084
[2025-07-26 14:28:22] 2025-07-26 12:06:46,215 | INFO     | process IDs to be killed: [25084] (in reverse order)
[2025-07-26 14:28:22] 2025-07-26 12:06:47,309 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 14:28:22] 2025-07-26 12:06:47,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 14:28:22] 2025-07-26 12:06:47,313 | INFO     | did not find any defunct processes belonging to 25084
[2025-07-26 14:28:22] 2025-07-26 12:06:47,322 | INFO     | did not find any defunct processes belonging to 25084
[2025-07-26 14:28:22] 2025-07-26 12:06:47,322 | INFO     | ready for new job
[2025-07-26 14:28:22] 2025-07-26 12:06:47,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 14:28:22] 2025-07-26 12:06:47,324 | INFO     | ***************************************
[2025-07-26 14:28:22] 2025-07-26 12:06:47,324 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 14:28:22] 2025-07-26 12:06:47,325 | INFO     | ***************************************
[2025-07-26 14:28:22] 2025-07-26 12:06:47,325 | INFO     | 
[2025-07-26 14:28:22] 2025-07-26 12:06:47,325 | INFO     | pilot is running in a VM
[2025-07-26 14:28:22] 2025-07-26 12:06:47,325 | INFO     | architecture information:
[2025-07-26 14:28:22] 2025-07-26 12:06:47,341 | INFO     | executing command: cat /etc/os-release
[2025-07-26 14:28:22] 2025-07-26 12:06:47,584 | INFO     | cat /etc/os-release:
[2025-07-26 14:28:22] NAME="CentOS Linux"
[2025-07-26 14:28:22] VERSION="7 (Core)"
[2025-07-26 14:28:22] ID="centos"
[2025-07-26 14:28:22] ID_LIKE="rhel fedora"
[2025-07-26 14:28:22] VERSION_ID="7"
[2025-07-26 14:28:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 14:28:22] ANSI_COLOR="0;31"
[2025-07-26 14:28:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 14:28:22] HOME_URL="https://www.centos.org/"
[2025-07-26 14:28:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 14:28:22] 
[2025-07-26 14:28:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 14:28:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 14:28:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 14:28:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 14:28:22] 
[2025-07-26 14:28:22] 2025-07-26 12:06:47,585 | INFO     | ***************************************
[2025-07-26 14:28:22] 2025-07-26 12:06:48,088 | INFO     | executing command: df -mP /var/lib/boinc/slots/22
[2025-07-26 14:28:22] 2025-07-26 12:06:48,253 | INFO     | sufficient remaining disk space (495442722816 B)
[2025-07-26 14:28:22] 2025-07-26 12:06:48,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 14:28:22] 2025-07-26 12:06:48,254 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 14:28:22] 2025-07-26 12:06:48,254 | INFO     | update_server=False
[2025-07-26 14:28:22] 2025-07-26 12:06:48,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 14:28:22] 2025-07-26 12:06:48,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:28:22] 2025-07-26 12:06:48,256 | INFO     | aborting loop
[2025-07-26 14:28:22] 2025-07-26 12:06:48,626 | INFO     | all job control threads have been joined
[2025-07-26 14:28:22] 2025-07-26 12:06:48,804 | INFO     | all payload control threads have been joined
[2025-07-26 14:28:22] 2025-07-26 12:06:48,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 14:28:22] 2025-07-26 12:06:49,260 | INFO     | [job] retrieve thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:49,261 | INFO     | [job] job monitor thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:49,351 | INFO     | all data control threads have been joined
[2025-07-26 14:28:22] 2025-07-26 12:06:49,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:28:22] 2025-07-26 12:06:49,632 | INFO     | [job] control thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:49,715 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:49,764 | INFO     | [job] validate thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:49,810 | INFO     | [payload] control thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:49,931 | INFO     | [payload] validate_post thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,141 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,160 | INFO     | [data] copytool_in thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,168 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,298 | INFO     | [payload] failed_post thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,357 | INFO     | [data] control thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 14:28:22] 2025-07-26 12:06:50,588 | INFO     | [job] queue monitor thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:50,910 | INFO     | [data] copytool_out thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:54,511 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 14:28:22] 2025-07-26 12:06:56,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631667414848)>', '<ExcThread(monitor, started 139631358093056)>']
[2025-07-26 14:28:22] 2025-07-26 12:07:01,087 | INFO     | all workflow threads have been joined
[2025-07-26 14:28:22] 2025-07-26 12:07:01,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 14:28:22] 2025-07-26 12:07:01,087 | INFO     | traces error code: 0
[2025-07-26 14:28:22] 2025-07-26 12:07:01,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 14:28:22] 2025-07-26 12:07:16,742 | INFO     | PID=18545 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 14:28:22] 2025-07-26 12:07:16,743 | INFO     | .. there are 9 such processes running
[2025-07-26 14:28:22] 2025-07-26 12:07:16,744 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 14:28:22] 2025-07-26 12:07:16,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 14:28:22] 2025-07-26 12:07:16,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 14:28:22] 2025-07-26 12:07:16,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 14:28:22] 2025-07-26 12:07:16,744 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 14:28:22] 2025-07-26 12:07:16,744 | INFO     | [monitor] control thread has ended
[2025-07-26 14:28:22] 2025-07-26 12:07:17,044 [wrapper] ==== pilot stdout END ====
[2025-07-26 14:28:22] 2025-07-26 12:07:17,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 14:28:22] 2025-07-26 12:07:17,202 [wrapper] pilotpid: 18545
[2025-07-26 14:28:22] 2025-07-26 12:07:17,289 [wrapper] Pilot exit status: 0
[2025-07-26 14:28:22] 2025-07-26 12:07:17,787 [wrapper] pandaids: 6745336473
[2025-07-26 14:28:22] 2025-07-26 12:07:18,423 [wrapper] cleanup supervisor_pilot 13184 18546
[2025-07-26 14:28:22] 2025-07-26 12:07:18,526 [wrapper] Test setup, not cleaning
[2025-07-26 14:28:22] 2025-07-26 12:07:18,637 [wrapper] apfmon messages muted
[2025-07-26 14:28:22] 2025-07-26 12:07:18,742 [wrapper] ==== wrapper stdout END ====
[2025-07-26 14:28:22] 2025-07-26 12:07:18,839 [wrapper] ==== wrapper stderr END ====
[2025-07-26 14:28:22]  *** Error codes and diagnostics ***
[2025-07-26 14:28:22]     "exeErrorCode": 0,
[2025-07-26 14:28:22]     "exeErrorDiag": "",
[2025-07-26 14:28:22]     "pilotErrorCode": 0,
[2025-07-26 14:28:22]     "pilotErrorDiag": "",
[2025-07-26 14:28:22]  *** Listing of results directory ***
[2025-07-26 14:28:22] total 605452
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc    530466 Jul 25 03:46 pilot3.tar.gz
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc      5112 Jul 25 04:04 queuedata.json
[2025-07-26 14:28:22] -rwx------. 1 boinc boinc     36292 Jul 25 04:05 runpilot2-wrapper.sh
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc       100 Jul 26 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 14:28:22] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 08:21 run_atlas
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc       105 Jul 26 08:21 job.xml
[2025-07-26 14:28:22] -rw-r--r--. 2 boinc boinc 331054227 Jul 26 08:21 EVNT.45697470._000138.pool.root.1
[2025-07-26 14:28:22] -rw-r--r--. 2 boinc boinc     15095 Jul 26 08:21 start_atlas.sh
[2025-07-26 14:28:22] drwxrwx--x. 2 boinc boinc        68 Jul 26 08:21 shared
[2025-07-26 14:28:22] -rw-r--r--. 2 boinc boinc    542913 Jul 26 08:21 input.tar.gz
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc      6392 Jul 26 08:21 init_data.xml
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc         0 Jul 26 08:21 boinc_lockfile
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc      2613 Jul 26 08:21 pandaJob.out
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc    980001 Jul 26 08:21 agis_schedconf.cvmfs.json
[2025-07-26 14:28:22] drwx------. 4 boinc boinc      4096 Jul 26 08:21 pilot3
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc 280663180 Jul 26 14:03 HITS.45697472._006510.pool.root.1
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc       531 Jul 26 14:03 boinc_task_state.xml
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc      1019 Jul 26 14:04 memory_monitor_summary.json
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc   1593052 Jul 26 14:04 agis_ddmendpoints.agis.ALL.json
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc    434504 Jul 26 14:04 log.45697472._006510.job.log.tgz.1
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc      7771 Jul 26 14:06 heartbeat.json
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc        95 Jul 26 14:07 pilot_heartbeat.json
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc       890 Jul 26 14:07 pilotlog.txt
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc   1764387 Jul 26 14:07 log.45697472._006510.job.log.1
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc       357 Jul 26 14:07 output.list
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc       620 Jul 26 14:07 runtime_log
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc   2222080 Jul 26 14:07 result.tar.gz
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc       658 Jul 26 14:07 ZDpMDmUzMz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwHyKDmT8qQQm.diag
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc      8674 Jul 26 14:07 runtime_log.err
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc        28 Jul 26 14:28 wrapper_checkpoint.txt
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc      8192 Jul 26 14:28 boinc_mmap_file
[2025-07-26 14:28:22] -rw-r--r--. 1 boinc boinc     20562 Jul 26 14:28 stderr.txt
[2025-07-26 14:28:22] HITS file was successfully produced:
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc 280663180 Jul 26 14:03 shared/HITS.pool.root.1
[2025-07-26 14:28:22]  *** Contents of shared directory: ***
[2025-07-26 14:28:22] total 600104
[2025-07-26 14:28:22] -rw-r--r--. 2 boinc boinc 331054227 Jul 26 08:21 ATLAS.root_0
[2025-07-26 14:28:22] -rw-r--r--. 2 boinc boinc     15095 Jul 26 08:21 start_atlas.sh
[2025-07-26 14:28:22] -rw-r--r--. 2 boinc boinc    542913 Jul 26 08:21 input.tar.gz
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc 280663180 Jul 26 14:03 HITS.pool.root.1
[2025-07-26 14:28:22] -rw-------. 1 boinc boinc   2222080 Jul 26 14:07 result.tar.gz
14:28:24 (14568): run_atlas exited; CPU time 80364.139168
14:28:24 (14568): called boinc_finish(0)

</stderr_txt>
]]>

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