Name K71MDmHBMz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPNOLDmqbv57n_1
Workunit 233780837
Created 25 Jul 2025, 4:44:24 UTC
Sent 25 Jul 2025, 7:51:51 UTC
Report deadline 2 Aug 2025, 7:51:51 UTC
Received 28 Jul 2025, 7:06:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10855769
Run time 3 hours 31 min 50 sec
CPU time 13 hours 41 min 50 sec
Validate state Valid
Credit 524.16
Device peak FLOPS 20.13 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.50 GB
Peak swap size 2.83 GB
Peak disk usage 486.65 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:52 (1407865): wrapper (7.7.26015): starting
04:32:52 (1407865): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 04:32:52] Arguments: --nthreads 4
[2025-07-28 04:32:52] Threads: 4
[2025-07-28 04:32:52] Checking for CVMFS
[2025-07-28 04:32:52] No cvmfs_config command found, will try listing directly
[2025-07-28 04:32:52] CVMFS is ok
[2025-07-28 04:32:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 04:32:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 04:32:52] Further information can be found at the LHC@home message board.
[2025-07-28 04:32:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 04:32:52] Checking for apptainer binary...
[2025-07-28 04:32:52] which: no apptainer in ((null))
[2025-07-28 04:32:52] apptainer is not installed, using version from CVMFS
[2025-07-28 04:32:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 04:32:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-28 04:32:52] apptainer works
[2025-07-28 04:32:52] Set ATHENA_PROC_NUMBER=4
[2025-07-28 04:32:52] Set ATHENA_CORE_NUMBER=4
[2025-07-28 04:32:52] Starting ATLAS job with PandaID=6744945265
[2025-07-28 04:32:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 08:04:39]  *** The last 200 lines of the pilot log: ***
[2025-07-28 08:04:39] 2025-07-28 06:04:02,548 | INFO     | PID=1411531 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 08:04:39] 2025-07-28 06:04:02,548 | INFO     | .. there are 13 such processes running
[2025-07-28 08:04:39] 2025-07-28 06:04:04,946 | INFO     | monitor loop #925: job 0:6744945265 is in state 'finished'
[2025-07-28 08:04:39] 2025-07-28 06:04:04,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,025 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-28 08:04:39] 2025-07-28 06:04:06,035 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2583.911937499999
[2025-07-28 08:04:39] 2025-07-28 06:04:06,047 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6744945265/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,048 | INFO     | extracted standard info from prmon json
[2025-07-28 08:04:39] 2025-07-28 06:04:06,048 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 08:04:39] 2025-07-28 06:04:06,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 08:04:39] 2025-07-28 06:04:06,048 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 08:04:39] 2025-07-28 06:04:06,048 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 08:04:39] 2025-07-28 06:04:06,052 | INFO     | fitting pss+swap vs Time
[2025-07-28 08:04:39] 2025-07-28 06:04:06,052 | INFO     | sum of square deviations: 2750295288.0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,053 | INFO     | sum of deviations: 22132579735.999992
[2025-07-28 08:04:39] 2025-07-28 06:04:06,054 | INFO     | mean x: 1753676292.0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,054 | INFO     | mean y: 2318125.5700483094
[2025-07-28 08:04:39] 2025-07-28 06:04:06,054 | INFO     | -- intersect: -14110123012.358706
[2025-07-28 08:04:39] 2025-07-28 06:04:06,054 | INFO     | intersect: -14110123012.358706
[2025-07-28 08:04:39] 2025-07-28 06:04:06,054 | INFO     | chi2: 1.4250980500349462
[2025-07-28 08:04:39] 2025-07-28 06:04:06,055 | INFO     | sum of square deviations: 2555770710.5
[2025-07-28 08:04:39] 2025-07-28 06:04:06,056 | INFO     | sum of deviations: 21400319510.000008
[2025-07-28 08:04:39] 2025-07-28 06:04:06,056 | INFO     | mean x: 1753676139.5
[2025-07-28 08:04:39] 2025-07-28 06:04:06,057 | INFO     | mean y: 2317551.386138614
[2025-07-28 08:04:39] 2025-07-28 06:04:06,057 | INFO     | -- intersect: -14681796930.472559
[2025-07-28 08:04:39] 2025-07-28 06:04:06,057 | INFO     | intersect: -14681796930.472559
[2025-07-28 08:04:39] 2025-07-28 06:04:06,057 | INFO     | chi2: 1.4259709081544767
[2025-07-28 08:04:39] 2025-07-28 06:04:06,057 | INFO     | current chi2=1.4259709081544767 (change=-0.06124898700893769 %)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,057 | INFO     | right removable region: 201
[2025-07-28 08:04:39] 2025-07-28 06:04:06,058 | INFO     | sum of square deviations: 2555770710.5
[2025-07-28 08:04:39] 2025-07-28 06:04:06,059 | INFO     | sum of deviations: -5852822753.999999
[2025-07-28 08:04:39] 2025-07-28 06:04:06,059 | INFO     | mean x: 1753676444.5
[2025-07-28 08:04:39] 2025-07-28 06:04:06,059 | INFO     | mean y: 2339803.2376237623
[2025-07-28 08:04:39] 2025-07-28 06:04:06,059 | INFO     | -- intersect: 4018332848.057916
[2025-07-28 08:04:39] 2025-07-28 06:04:06,059 | INFO     | intersect: 4018332848.057916
[2025-07-28 08:04:39] 2025-07-28 06:04:06,060 | INFO     | chi2: 0.0182385468512416
[2025-07-28 08:04:39] 2025-07-28 06:04:06,060 | INFO     | current chi2=0.0182385468512416 (change=98.72019003528955 %)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,060 | INFO     | sum of square deviations: 2370641658.0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,061 | INFO     | sum of deviations: -5872447612.999999
[2025-07-28 08:04:39] 2025-07-28 06:04:06,061 | INFO     | mean x: 1753676597.0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,062 | INFO     | mean y: 2339800.8274111673
[2025-07-28 08:04:39] 2025-07-28 06:04:06,062 | INFO     | -- intersect: 4346469126.013938
[2025-07-28 08:04:39] 2025-07-28 06:04:06,062 | INFO     | intersect: 4346469126.013938
[2025-07-28 08:04:39] 2025-07-28 06:04:06,062 | INFO     | chi2: 0.014699970879728921
[2025-07-28 08:04:39] 2025-07-28 06:04:06,062 | INFO     | current chi2=0.014699970879728921 (change=19.401633257157147 %)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,062 | INFO     | left removable region: 20
[2025-07-28 08:04:39] 2025-07-28 06:04:06,062 | INFO     | sum of square deviations: 1838657730.0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,063 | INFO     | sum of deviations: -3494373776.0000014
[2025-07-28 08:04:39] 2025-07-28 06:04:06,064 | INFO     | mean x: 1753676719.0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,064 | INFO     | mean y: 2337444.0662983423
[2025-07-28 08:04:39] 2025-07-28 06:04:06,064 | INFO     | -- intersect: 3335204588.651889
[2025-07-28 08:04:39] 2025-07-28 06:04:06,064 | INFO     | intersect: 3335204588.651889
[2025-07-28 08:04:39] 2025-07-28 06:04:06,064 | INFO     | chi2: 0.012746520324534072
[2025-07-28 08:04:39] 2025-07-28 06:04:06,064 | INFO     | -- intersect: 3335204588.651889
[2025-07-28 08:04:39] 2025-07-28 06:04:06,064 | INFO     | current memory leak: -1.90 B/s (using 181 data points, chi2=0.01)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | could have reported an average CPU frequency of 2560 MHz (10 samples)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | ..............................
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . Timing measurements:
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . get job = 0 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . initial setup = 1 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . payload setup = 6 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . stage-in = 0 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . payload execution = 12630 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . stage-out = 1 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,065 | INFO     | . log creation = 0 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,066 | INFO     | ..............................
[2025-07-28 08:04:39] 2025-07-28 06:04:06,158 | INFO     | 
[2025-07-28 08:04:39] 2025-07-28 06:04:06,158 | INFO     | job summary report
[2025-07-28 08:04:39] 2025-07-28 06:04:06,158 | INFO     | --------------------------------------------------
[2025-07-28 08:04:39] 2025-07-28 06:04:06,158 | INFO     | PanDA job id: 6744945265
[2025-07-28 08:04:39] 2025-07-28 06:04:06,158 | INFO     | task id: 45743349
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | errors: (none)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | pilot state: finished 
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | transexitcode: 0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | exeerrorcode: 0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | exeerrordiag: 
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | exitcode: 0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | exitmsg: OK
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | cpuconsumptiontime: 48536 s
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | nevents: 400
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | neventsw: 0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | pid: 1418491
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | pgrp: 1418491
[2025-07-28 08:04:39] 2025-07-28 06:04:06,159 | INFO     | corecount: 4
[2025-07-28 08:04:39] 2025-07-28 06:04:06,160 | INFO     | event service: False
[2025-07-28 08:04:39] 2025-07-28 06:04:06,160 | INFO     | sizes: {0: 2397312, 1: 2397511, 5: 2397773, 11: 2397829, 12641: 2427887, 12643: 2436907, 12645: 2437091, 12649: 2437285}
[2025-07-28 08:04:39] 2025-07-28 06:04:06,160 | INFO     | --------------------------------------------------
[2025-07-28 08:04:39] 2025-07-28 06:04:06,160 | INFO     | 
[2025-07-28 08:04:39] 2025-07-28 06:04:06,160 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-07-28 08:04:39] 2025-07-28 06:04:06,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,177 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | job 6744945265 has completed (purged errors)
[2025-07-28 08:04:39] 2025-07-28 06:04:06,178 | INFO     | overall cleanup function is called
[2025-07-28 08:04:39] 2025-07-28 06:04:07,186 | INFO     | --- collectZombieJob: --- 10, [1418491]
[2025-07-28 08:04:39] 2025-07-28 06:04:07,186 | INFO     | zombie collector waiting for pid 1418491
[2025-07-28 08:04:39] 2025-07-28 06:04:07,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 08:04:39] 2025-07-28 06:04:07,186 | INFO     | collected zombie processes
[2025-07-28 08:04:39] 2025-07-28 06:04:07,186 | INFO     | will attempt to kill all subprocesses of pid=1418491
[2025-07-28 08:04:39] 2025-07-28 06:04:07,515 | INFO     | process IDs to be killed: [1418491] (in reverse order)
[2025-07-28 08:04:39] 2025-07-28 06:04:07,618 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 08:04:39] 2025-07-28 06:04:07,619 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 08:04:39] 2025-07-28 06:04:07,629 | INFO     | did not find any defunct processes belonging to 1418491
[2025-07-28 08:04:39] 2025-07-28 06:04:07,638 | INFO     | did not find any defunct processes belonging to 1418491
[2025-07-28 08:04:39] 2025-07-28 06:04:07,638 | INFO     | ready for new job
[2025-07-28 08:04:39] 2025-07-28 06:04:07,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 08:04:39] 2025-07-28 06:04:07,640 | INFO     | ***************************************
[2025-07-28 08:04:39] 2025-07-28 06:04:07,641 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 08:04:39] 2025-07-28 06:04:07,641 | INFO     | ***************************************
[2025-07-28 08:04:39] 2025-07-28 06:04:07,641 | INFO     | 
[2025-07-28 08:04:39] 2025-07-28 06:04:07,644 | INFO     | architecture information:
[2025-07-28 08:04:39] 2025-07-28 06:04:07,645 | INFO     | executing command: cat /etc/os-release
[2025-07-28 08:04:39] 2025-07-28 06:04:07,658 | INFO     | cat /etc/os-release:
[2025-07-28 08:04:39] NAME="CentOS Linux"
[2025-07-28 08:04:39] VERSION="7 (Core)"
[2025-07-28 08:04:39] ID="centos"
[2025-07-28 08:04:39] ID_LIKE="rhel fedora"
[2025-07-28 08:04:39] VERSION_ID="7"
[2025-07-28 08:04:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 08:04:39] ANSI_COLOR="0;31"
[2025-07-28 08:04:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 08:04:39] HOME_URL="https://www.centos.org/"
[2025-07-28 08:04:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 08:04:39] 
[2025-07-28 08:04:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 08:04:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 08:04:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 08:04:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 08:04:39] 
[2025-07-28 08:04:39] 2025-07-28 06:04:07,658 | INFO     | ***************************************
[2025-07-28 08:04:39] 2025-07-28 06:04:08,161 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-07-28 08:04:39] 2025-07-28 06:04:08,179 | INFO     | sufficient remaining disk space (664521408512 B)
[2025-07-28 08:04:39] 2025-07-28 06:04:08,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 08:04:39] 2025-07-28 06:04:08,180 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 08:04:39] 2025-07-28 06:04:08,180 | INFO     | update_server=False
[2025-07-28 08:04:39] 2025-07-28 06:04:08,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 08:04:39] 2025-07-28 06:04:08,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 08:04:39] 2025-07-28 06:04:08,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 08:04:39] 2025-07-28 06:04:08,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:04:39] 2025-07-28 06:04:08,454 | INFO     | aborting loop
[2025-07-28 08:04:39] 2025-07-28 06:04:09,037 | INFO     | all data control threads have been joined
[2025-07-28 08:04:39] 2025-07-28 06:04:09,185 | INFO     | [job] retrieve thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:09,203 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:09,266 | INFO     | [data] copytool_in thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:09,329 | INFO     | all job control threads have been joined
[2025-07-28 08:04:39] 2025-07-28 06:04:09,414 | INFO     | [job] validate thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:09,459 | INFO     | [job] job monitor thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:09,516 | INFO     | all payload control threads have been joined
[2025-07-28 08:04:39] 2025-07-28 06:04:09,625 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,042 | INFO     | [data] control thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,140 | INFO     | [payload] failed_post thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,186 | INFO     | [data] copytool_out thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,200 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,334 | INFO     | [job] control thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,521 | INFO     | [payload] control thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:10,597 | INFO     | [payload] validate_post thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:11,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 08:04:39] 2025-07-28 06:04:12,177 | INFO     | [job] queue monitor thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:12,186 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 08:04:39] 2025-07-28 06:04:13,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22941565445952)>', '<ExcThread(monitor, started 22941324502784)>']
[2025-07-28 08:04:39] 2025-07-28 06:04:18,648 | INFO     | all workflow threads have been joined
[2025-07-28 08:04:39] 2025-07-28 06:04:18,648 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 08:04:39] 2025-07-28 06:04:18,648 | INFO     | traces error code: 0
[2025-07-28 08:04:39] 2025-07-28 06:04:18,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 08:04:39] 2025-07-28 06:04:39,002 | INFO     | PID=1411531 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 08:04:39] 2025-07-28 06:04:39,002 | INFO     | .. there are 13 such processes running
[2025-07-28 08:04:39] 2025-07-28 06:04:39,003 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 08:04:39] 2025-07-28 06:04:39,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 08:04:39] 2025-07-28 06:04:39,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 08:04:39] 2025-07-28 06:04:39,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 08:04:39] 2025-07-28 06:04:39,003 | INFO     | [monitor] control thread has ended
[2025-07-28 08:04:39] 2025-07-28 06:04:39,151 [wrapper] ==== pilot stdout END ====
[2025-07-28 08:04:39] 2025-07-28 06:04:39,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 08:04:39] 2025-07-28 06:04:39,156 [wrapper] pilotpid: 1411531
[2025-07-28 08:04:39] 2025-07-28 06:04:39,159 [wrapper] Pilot exit status: 0
[2025-07-28 08:04:39] 2025-07-28 06:04:39,168 [wrapper] pandaids: 6744945265
[2025-07-28 08:04:39] 2025-07-28 06:04:39,234 [wrapper] cleanup supervisor_pilot 1919491 1411532
[2025-07-28 08:04:39] 2025-07-28 06:04:39,236 [wrapper] Test setup, not cleaning
[2025-07-28 08:04:39] 2025-07-28 06:04:39,239 [wrapper] apfmon messages muted
[2025-07-28 08:04:39] 2025-07-28 06:04:39,242 [wrapper] ==== wrapper stdout END ====
[2025-07-28 08:04:39] 2025-07-28 06:04:39,244 [wrapper] ==== wrapper stderr END ====
[2025-07-28 08:04:39]  *** Error codes and diagnostics ***
[2025-07-28 08:04:39]     "exeErrorCode": 0,
[2025-07-28 08:04:39]     "exeErrorDiag": "",
[2025-07-28 08:04:39]     "pilotErrorCode": 0,
[2025-07-28 08:04:39]     "pilotErrorDiag": "",
[2025-07-28 08:04:39]  *** Listing of results directory ***
[2025-07-28 08:04:39] total 353764
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc    530466 Jul 25 03:09 pilot3.tar.gz
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc      5112 Jul 25 03:12 queuedata.json
[2025-07-28 08:04:39] -rwx------ 1 boinc boinc     36292 Jul 25 03:13 runpilot2-wrapper.sh
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc       100 Jul 28 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 08:04:39] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 04:32 run_atlas
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc       105 Jul 28 04:32 job.xml
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc      6635 Jul 28 04:32 init_data.xml
[2025-07-28 08:04:39] -rw-r--r-- 2 boinc boinc 144552688 Jul 28 04:32 EVNT.45743347._000770.pool.root.1
[2025-07-28 08:04:39] -rw-r--r-- 2 boinc boinc     15095 Jul 28 04:32 start_atlas.sh
[2025-07-28 08:04:39] drwxrwx--x 2 boinc boinc      4096 Jul 28 04:32 shared
[2025-07-28 08:04:39] -rw-r--r-- 2 boinc boinc    542901 Jul 28 04:32 input.tar.gz
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc         0 Jul 28 04:32 boinc_lockfile
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc      2561 Jul 28 04:32 pandaJob.out
[2025-07-28 08:04:39] -rw------- 1 boinc boinc    980125 Jul 28 04:33 agis_schedconf.cvmfs.json
[2025-07-28 08:04:39] drwx------ 4 boinc boinc      4096 Jul 28 04:33 pilot3
[2025-07-28 08:04:39] -rw------- 1 boinc boinc 210816735 Jul 28 08:03 HITS.45743349._014030.pool.root.1
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc       530 Jul 28 08:03 boinc_task_state.xml
[2025-07-28 08:04:39] -rw------- 1 boinc boinc      1034 Jul 28 08:03 memory_monitor_summary.json
[2025-07-28 08:04:39] -rw------- 1 boinc boinc   1593052 Jul 28 08:03 agis_ddmendpoints.agis.ALL.json
[2025-07-28 08:04:39] -rw------- 1 boinc boinc    314181 Jul 28 08:03 log.45743349._014030.job.log.tgz.1
[2025-07-28 08:04:39] -rw------- 1 boinc boinc      7826 Jul 28 08:04 heartbeat.json
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc      8192 Jul 28 08:04 boinc_mmap_file
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc        28 Jul 28 08:04 wrapper_checkpoint.txt
[2025-07-28 08:04:39] -rw------- 1 boinc boinc       823 Jul 28 08:04 pilotlog.txt
[2025-07-28 08:04:39] -rw------- 1 boinc boinc        95 Jul 28 08:04 pilot_heartbeat.json
[2025-07-28 08:04:39] -rw------- 1 boinc boinc   1188203 Jul 28 08:04 log.45743349._014030.job.log.1
[2025-07-28 08:04:39] -rw------- 1 boinc boinc       357 Jul 28 08:04 output.list
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc       620 Jul 28 08:04 runtime_log
[2025-07-28 08:04:39] -rw------- 1 boinc boinc   1525760 Jul 28 08:04 result.tar.gz
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc      9027 Jul 28 08:04 runtime_log.err
[2025-07-28 08:04:39] -rw------- 1 boinc boinc       665 Jul 28 08:04 K71MDmHBMz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPNOLDmqbv57n.diag
[2025-07-28 08:04:39] -rw-r--r-- 1 boinc boinc     21051 Jul 28 08:04 stderr.txt
[2025-07-28 08:04:39] HITS file was successfully produced:
[2025-07-28 08:04:39] -rw------- 1 boinc boinc 210816735 Jul 28 08:03 shared/HITS.pool.root.1
[2025-07-28 08:04:39]  *** Contents of shared directory: ***
[2025-07-28 08:04:39] total 349088
[2025-07-28 08:04:39] -rw-r--r-- 2 boinc boinc 144552688 Jul 28 04:32 ATLAS.root_0
[2025-07-28 08:04:39] -rw-r--r-- 2 boinc boinc     15095 Jul 28 04:32 start_atlas.sh
[2025-07-28 08:04:39] -rw-r--r-- 2 boinc boinc    542901 Jul 28 04:32 input.tar.gz
[2025-07-28 08:04:39] -rw------- 1 boinc boinc 210816735 Jul 28 08:03 HITS.pool.root.1
[2025-07-28 08:04:39] -rw------- 1 boinc boinc   1525760 Jul 28 08:04 result.tar.gz
08:04:40 (1407865): run_atlas exited; CPU time 48949.458134
08:04:40 (1407865): called boinc_finish(0)

</stderr_txt>
]]>


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