Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:19:25 (3061642): wrapper (7.7.26015): starting
22:19:25 (3061642): wrapper: running run_atlas (--nthreads 3)
[2025-07-25 22:19:25] Arguments: --nthreads 3
[2025-07-25 22:19:25] Threads: 3
[2025-07-25 22:19:25] Checking for CVMFS
[2025-07-25 22:19:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 22:19:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 22:19:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 22:19:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 22:19:26] 2.9.2.0 1693042 5567 81980 148752 1 56 11109504 36864001 0 130560 0 3601691 99.988 212404 2650 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-25 22:19:26] CVMFS is ok
[2025-07-25 22:19:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 22:19:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 22:19:26] Further information can be found at the LHC@home message board.
[2025-07-25 22:19:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 22:19:26] Checking for apptainer binary...
[2025-07-25 22:19:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 22:19:26] Running /usr/bin/apptainer --version
[2025-07-25 22:19:26] apptainer version 1.4.1-1.1
[2025-07-25 22:19:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 22:19:26] magicA250a
[2025-07-25 22:19:26] apptainer works
[2025-07-25 22:19:26] Set ATHENA_PROC_NUMBER=3
[2025-07-25 22:19:26] Set ATHENA_CORE_NUMBER=3
[2025-07-25 22:19:26] Starting ATLAS job with PandaID=6744944895
[2025-07-25 22:19:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 23:55:51]  *** The last 200 lines of the pilot log: ***
[2025-07-25 23:55:51]  protocol_id=None
[2025-07-25 23:55:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 23:55:51]  replicas=None
[2025-07-25 23:55:51]  scope=mc23_13p6TeV
[2025-07-25 23:55:51]  status=None
[2025-07-25 23:55:51]  status_code=0
[2025-07-25 23:55:51]  storage_token=
[2025-07-25 23:55:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744944895/log.45743349._013918.job.log.tgz.1
[2025-07-25 23:55:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/22/log.45743349._013918.job.log.tgz.1
[2025-07-25 23:55:51]  workdir=None
[2025-07-25 23:55:51] ]
[2025-07-25 23:55:51] 2025-07-25 21:55:11,143 | INFO     | transferring file log.45743349._013918.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744944895/log.45743349._013918.job.log.tgz.1 to /local/data/boinc/
[2025-07-25 23:55:51] 2025-07-25 21:55:11,143 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744944895/log.45743349._013918.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0139
[2025-07-25 23:55:51] 2025-07-25 21:55:11,156 | INFO     | adding to output.list: log.45743349._013918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/22/log.45743349._013918.job.log.tg
[2025-07-25 23:55:51] 2025-07-25 21:55:11,156 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 23:55:51] 2025-07-25 21:55:11,157 | INFO     | summary of transferred files:
[2025-07-25 23:55:51] 2025-07-25 21:55:11,157 | INFO     |  -- lfn=log.45743349._013918.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 23:55:51] 2025-07-25 21:55:11,157 | INFO     | stage-out finished correctly
[2025-07-25 23:55:51] 2025-07-25 21:55:13,162 | INFO     | monitor loop #443: job 0:6744944895 is in state 'finished'
[2025-07-25 23:55:51] 2025-07-25 21:55:13,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 23:55:51] 2025-07-25 21:55:14,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 23:55:51] 2025-07-25 21:55:15,667 | INFO     | monitor loop #444: job 0:6744944895 is in state 'finished'
[2025-07-25 23:55:51] 2025-07-25 21:55:15,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 23:55:51] 2025-07-25 21:55:16,652 | INFO     | job 6744944895 has state=finished
[2025-07-25 23:55:51] 2025-07-25 21:55:16,652 | INFO     | preparing for final server update for job 6744944895 in state='finished'
[2025-07-25 23:55:51] 2025-07-25 21:55:16,652 | INFO     | this job has now completed (state=finished)
[2025-07-25 23:55:51] 2025-07-25 21:55:16,652 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 23:55:51] 2025-07-25 21:55:16,652 | INFO     | log transfer has been attempted: DONE
[2025-07-25 23:55:51] 2025-07-25 21:55:16,652 | INFO     | job 6744944895 has finished - writing final server update
[2025-07-25 23:55:51] 2025-07-25 21:55:16,653 | INFO     | total number of processed events: 400 (read)
[2025-07-25 23:55:51] 2025-07-25 21:55:16,654 | INFO     | executing command: lscpu
[2025-07-25 23:55:51] 2025-07-25 21:55:16,669 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 23:55:51] 2025-07-25 21:55:18,169 | INFO     | monitor loop #445: job 0:6744944895 is in state 'finished'
[2025-07-25 23:55:51] 2025-07-25 21:55:18,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 23:55:51] 2025-07-25 21:55:18,800 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 23:55:51] 2025-07-25 21:55:18,801 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3602.82575
[2025-07-25 23:55:51] 2025-07-25 21:55:18,802 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744944895/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:55:51] 2025-07-25 21:55:18,802 | INFO     | extracted standard info from prmon json
[2025-07-25 23:55:51] 2025-07-25 21:55:18,802 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 23:55:51] 2025-07-25 21:55:18,802 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 23:55:51] 2025-07-25 21:55:18,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 23:55:51] 2025-07-25 21:55:18,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 23:55:51] 2025-07-25 21:55:18,803 | INFO     | fitting pss+swap vs Time
[2025-07-25 23:55:51] 2025-07-25 21:55:18,803 | INFO     | sum of square deviations: 204163828.0
[2025-07-25 23:55:51] 2025-07-25 21:55:18,803 | INFO     | sum of deviations: -16390549512.999998
[2025-07-25 23:55:51] 2025-07-25 21:55:18,803 | INFO     | mean x: 1753477718.0
[2025-07-25 23:55:51] 2025-07-25 21:55:18,803 | INFO     | mean y: 2515687.632183908
[2025-07-25 23:55:51] 2025-07-25 21:55:18,803 | INFO     | -- intersect: 140774089371.1999
[2025-07-25 23:55:51] 2025-07-25 21:55:18,803 | INFO     | intersect: 140774089371.1999
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | chi2: 0.08553194430309212
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | -- intersect: 140774089371.1999
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | current memory leak: -80.28 B/s (using 87 data points, chi2=0.09)
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | could have reported an average CPU frequency of 3856 MHz (7 samples)
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | ..............................
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . Timing measurements:
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . get job = 0 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . initial setup = 1 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . payload setup = 3 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . stage-in = 0 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . payload execution = 5718 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . stage-out = 0 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | . log creation = 0 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,804 | INFO     | ..............................
[2025-07-25 23:55:51] 2025-07-25 21:55:18,980 | INFO     | 
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | job summary report
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | --------------------------------------------------
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | PanDA job id: 6744944895
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | task id: 45743349
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | errors: (none)
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | pilot state: finished 
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | transexitcode: 0
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | exeerrorcode: 0
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | exeerrordiag: 
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | exitcode: 0
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | exitmsg: OK
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | cpuconsumptiontime: 16530 s
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | nevents: 400
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | neventsw: 0
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | pid: 3071766
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | pgrp: 3071766
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | corecount: 3
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | event service: False
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | sizes: {0: 2397476, 3: 2397738, 11: 2397766, 5725: 2424610, 5727: 2433614, 5730: 2433670, 5735: 2433992}
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | --------------------------------------------------
[2025-07-25 23:55:51] 2025-07-25 21:55:18,981 | INFO     | 
[2025-07-25 23:55:51] 2025-07-25 21:55:18,982 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-25 23:55:51] 2025-07-25 21:55:18,995 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | job 6744944895 has completed (purged errors)
[2025-07-25 23:55:51] 2025-07-25 21:55:18,996 | INFO     | overall cleanup function is called
[2025-07-25 23:55:51] 2025-07-25 21:55:19,251 | INFO     | PID=3065275 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 23:55:51] 2025-07-25 21:55:20,003 | INFO     | --- collectZombieJob: --- 10, [3071766]
[2025-07-25 23:55:51] 2025-07-25 21:55:20,003 | INFO     | zombie collector waiting for pid 3071766
[2025-07-25 23:55:51] 2025-07-25 21:55:20,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 23:55:51] 2025-07-25 21:55:20,003 | INFO     | collected zombie processes
[2025-07-25 23:55:51] 2025-07-25 21:55:20,003 | INFO     | will attempt to kill all subprocesses of pid=3071766
[2025-07-25 23:55:51] 2025-07-25 21:55:20,043 | INFO     | process IDs to be killed: [3071766] (in reverse order)
[2025-07-25 23:55:51] 2025-07-25 21:55:20,065 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 23:55:51] 2025-07-25 21:55:20,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 23:55:51] 2025-07-25 21:55:20,067 | INFO     | did not find any defunct processes belonging to 3071766
[2025-07-25 23:55:51] 2025-07-25 21:55:20,068 | INFO     | did not find any defunct processes belonging to 3071766
[2025-07-25 23:55:51] 2025-07-25 21:55:20,068 | INFO     | ready for new job
[2025-07-25 23:55:51] 2025-07-25 21:55:20,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 23:55:51] 2025-07-25 21:55:20,068 | INFO     | ***************************************
[2025-07-25 23:55:51] 2025-07-25 21:55:20,069 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 23:55:51] 2025-07-25 21:55:20,069 | INFO     | ***************************************
[2025-07-25 23:55:51] 2025-07-25 21:55:20,069 | INFO     | 
[2025-07-25 23:55:51] 2025-07-25 21:55:20,069 | INFO     | architecture information:
[2025-07-25 23:55:51] 2025-07-25 21:55:20,069 | INFO     | executing command: cat /etc/os-release
[2025-07-25 23:55:51] 2025-07-25 21:55:20,077 | INFO     | cat /etc/os-release:
[2025-07-25 23:55:51] NAME="CentOS Linux"
[2025-07-25 23:55:51] VERSION="7 (Core)"
[2025-07-25 23:55:51] ID="centos"
[2025-07-25 23:55:51] ID_LIKE="rhel fedora"
[2025-07-25 23:55:51] VERSION_ID="7"
[2025-07-25 23:55:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 23:55:51] ANSI_COLOR="0;31"
[2025-07-25 23:55:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 23:55:51] HOME_URL="https://www.centos.org/"
[2025-07-25 23:55:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 23:55:51] 
[2025-07-25 23:55:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 23:55:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 23:55:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 23:55:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 23:55:51] 
[2025-07-25 23:55:51] 2025-07-25 21:55:20,077 | INFO     | ***************************************
[2025-07-25 23:55:51] 2025-07-25 21:55:20,581 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-25 23:55:51] 2025-07-25 21:55:20,592 | INFO     | sufficient remaining disk space (349753573376 B)
[2025-07-25 23:55:51] 2025-07-25 21:55:20,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 23:55:51] 2025-07-25 21:55:20,592 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 23:55:51] 2025-07-25 21:55:20,592 | INFO     | update_server=False
[2025-07-25 23:55:51] 2025-07-25 21:55:20,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 23:55:51] 2025-07-25 21:55:20,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:55:51] 2025-07-25 21:55:20,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 23:55:51] 2025-07-25 21:55:20,673 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 23:55:51] 2025-07-25 21:55:20,674 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 23:55:51] 2025-07-25 21:55:20,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:55:51] 2025-07-25 21:55:20,674 | INFO     | will abort loop
[2025-07-25 23:55:51] 2025-07-25 21:55:21,001 | INFO     | all job control threads have been joined
[2025-07-25 23:55:51] 2025-07-25 21:55:21,059 | INFO     | all payload control threads have been joined
[2025-07-25 23:55:51] 2025-07-25 21:55:21,343 | INFO     | all data control threads have been joined
[2025-07-25 23:55:51] 2025-07-25 21:55:21,598 | INFO     | [job] queue monitor thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:21,598 | INFO     | [job] retrieve thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:21,675 | INFO     | [job] job monitor thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:21,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 23:55:51] 2025-07-25 21:55:21,710 | INFO     | [payload] validate_post thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,007 | INFO     | [job] control thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,047 | INFO     | [payload] failed_post thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,065 | INFO     | [payload] control thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,349 | INFO     | [data] control thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,470 | INFO     | [data] copytool_in thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,483 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,955 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,985 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:22,987 | INFO     | [job] validate thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:23,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:23,709 | INFO     | [data] copytool_out thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:24,599 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 23:55:51] 2025-07-25 21:55:24,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136566777664)>', '<ExcThread(monitor, started 140136209684224)>']
[2025-07-25 23:55:51] 2025-07-25 21:55:29,869 | INFO     | all workflow threads have been joined
[2025-07-25 23:55:51] 2025-07-25 21:55:29,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 23:55:51] 2025-07-25 21:55:29,869 | INFO     | traces error code: 0
[2025-07-25 23:55:51] 2025-07-25 21:55:29,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 23:55:51] 2025-07-25 21:55:51,349 | INFO     | PID=3065275 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 23:55:51] 2025-07-25 21:55:51,349 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 23:55:51] 2025-07-25 21:55:51,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 23:55:51] 2025-07-25 21:55:51,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 23:55:51] 2025-07-25 21:55:51,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 23:55:51] 2025-07-25 21:55:51,350 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 23:55:51] 2025-07-25 21:55:51,350 | INFO     | [monitor] control thread has ended
[2025-07-25 23:55:51] 2025-07-25 21:55:51,394 [wrapper] ==== pilot stdout END ====
[2025-07-25 23:55:51] 2025-07-25 21:55:51,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 23:55:51] 2025-07-25 21:55:51,399 [wrapper] pilotpid: 3065275
[2025-07-25 23:55:51] 2025-07-25 21:55:51,401 [wrapper] Pilot exit status: 0
[2025-07-25 23:55:51] 2025-07-25 21:55:51,408 [wrapper] pandaids: 6744944895
[2025-07-25 23:55:51] 2025-07-25 21:55:51,423 [wrapper] cleanup supervisor_pilot 3083953 3065276
[2025-07-25 23:55:51] 2025-07-25 21:55:51,425 [wrapper] Test setup, not cleaning
[2025-07-25 23:55:51] 2025-07-25 21:55:51,427 [wrapper] apfmon messages muted
[2025-07-25 23:55:51] 2025-07-25 21:55:51,430 [wrapper] ==== wrapper stdout END ====
[2025-07-25 23:55:51] 2025-07-25 21:55:51,432 [wrapper] ==== wrapper stderr END ====
[2025-07-25 23:55:51]  *** Error codes and diagnostics ***
[2025-07-25 23:55:51]     "exeErrorCode": 0,
[2025-07-25 23:55:51]     "exeErrorDiag": "",
[2025-07-25 23:55:51]     "pilotErrorCode": 0,
[2025-07-25 23:55:51]     "pilotErrorDiag": "",
[2025-07-25 23:55:51]  *** Listing of results directory ***
[2025-07-25 23:55:51] total 354612
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc    530466 Jul 25 02:40 pilot3.tar.gz
[2025-07-25 23:55:51] -rwx------ 1 boinc boinc     36292 Jul 25 03:02 runpilot2-wrapper.sh
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc      5112 Jul 25 03:02 queuedata.json
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc       100 Jul 25 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 23:55:51] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 22:19 run_atlas
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc       105 Jul 25 22:19 job.xml
[2025-07-25 23:55:51] -rw-r--r-- 2 boinc boinc 144222583 Jul 25 22:19 EVNT.45743347._000762.pool.root.1
[2025-07-25 23:55:51] -rw-r--r-- 2 boinc boinc    542890 Jul 25 22:19 input.tar.gz
[2025-07-25 23:55:51] -rw-r--r-- 2 boinc boinc     15095 Jul 25 22:19 start_atlas.sh
[2025-07-25 23:55:51] drwxrwx--x 2 boinc boinc      4096 Jul 25 22:19 shared
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc         0 Jul 25 22:19 boinc_setup_complete
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc      6445 Jul 25 22:19 init_data.xml
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc         0 Jul 25 22:19 boinc_lockfile
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc      2562 Jul 25 22:19 pandaJob.out
[2025-07-25 23:55:51] -rw------- 1 boinc boinc    979993 Jul 25 22:19 agis_schedconf.cvmfs.json
[2025-07-25 23:55:51] -rw------- 1 boinc boinc   1593052 Jul 25 22:19 agis_ddmendpoints.agis.ALL.json
[2025-07-25 23:55:51] drwx------ 4 boinc boinc      4096 Jul 25 22:19 pilot3
[2025-07-25 23:55:51] -rw------- 1 boinc boinc 213435147 Jul 25 23:54 HITS.45743349._013918.pool.root.1
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc       529 Jul 25 23:54 boinc_task_state.xml
[2025-07-25 23:55:51] -rw------- 1 boinc boinc        95 Jul 25 23:54 pilot_heartbeat.json
[2025-07-25 23:55:51] -rw------- 1 boinc boinc      1025 Jul 25 23:55 memory_monitor_summary.json
[2025-07-25 23:55:51] -rw------- 1 boinc boinc    239339 Jul 25 23:55 log.45743349._013918.job.log.tgz.1
[2025-07-25 23:55:51] -rw------- 1 boinc boinc      7774 Jul 25 23:55 heartbeat.json
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc      8192 Jul 25 23:55 boinc_mmap_file
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc        27 Jul 25 23:55 wrapper_checkpoint.txt
[2025-07-25 23:55:51] -rw------- 1 boinc boinc       817 Jul 25 23:55 pilotlog.txt
[2025-07-25 23:55:51] -rw------- 1 boinc boinc    553677 Jul 25 23:55 log.45743349._013918.job.log.1
[2025-07-25 23:55:51] -rw------- 1 boinc boinc       357 Jul 25 23:55 output.list
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc       620 Jul 25 23:55 runtime_log
[2025-07-25 23:55:51] -rw------- 1 boinc boinc    808960 Jul 25 23:55 result.tar.gz
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc      8754 Jul 25 23:55 runtime_log.err
[2025-07-25 23:55:51] -rw------- 1 boinc boinc       663 Jul 25 23:55 XKQNDmr0Lz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJMOLDmGZIZgm.diag
[2025-07-25 23:55:51] -rw-r--r-- 1 boinc boinc     21893 Jul 25 23:55 stderr.txt
[2025-07-25 23:55:51] HITS file was successfully produced:
[2025-07-25 23:55:51] -rw------- 1 boinc boinc 213435147 Jul 25 23:54 shared/HITS.pool.root.1
[2025-07-25 23:55:51]  *** Contents of shared directory: ***
[2025-07-25 23:55:51] total 350628
[2025-07-25 23:55:51] -rw-r--r-- 2 boinc boinc 144222583 Jul 25 22:19 ATLAS.root_0
[2025-07-25 23:55:51] -rw-r--r-- 2 boinc boinc    542890 Jul 25 22:19 input.tar.gz
[2025-07-25 23:55:51] -rw-r--r-- 2 boinc boinc     15095 Jul 25 22:19 start_atlas.sh
[2025-07-25 23:55:51] -rw------- 1 boinc boinc 213435147 Jul 25 23:54 HITS.pool.root.1
[2025-07-25 23:55:51] -rw------- 1 boinc boinc    808960 Jul 25 23:55 result.tar.gz
23:55:52 (3061642): run_atlas exited; CPU time 16547.881463
23:55:52 (3061642): called boinc_finish(0)

</stderr_txt>
]]>

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