Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:57:10 (4035480): wrapper (7.7.26015): starting
20:57:10 (4035480): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 20:57:10] Arguments: --nthreads 4
[2025-07-25 20:57:10] Threads: 4
[2025-07-25 20:57:10] Checking for CVMFS
[2025-07-25 20:57:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 20:57:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 20:57:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 20:57:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 20:57:10] 2.9.2.0 3472724 1822 89360 148750 1 57 34651207 36864001 0 130560 0 1487632 99.990 71830 6992 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-25 20:57:10] CVMFS is ok
[2025-07-25 20:57:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:57:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:57:10] Further information can be found at the LHC@home message board.
[2025-07-25 20:57:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:57:10] Checking for apptainer binary...
[2025-07-25 20:57:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 20:57:10] Running /usr/bin/apptainer --version
[2025-07-25 20:57:10] apptainer version 1.3.6-6.1
[2025-07-25 20:57:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:57:10] atlasA139
[2025-07-25 20:57:10] apptainer works
[2025-07-25 20:57:10] Set ATHENA_PROC_NUMBER=4
[2025-07-25 20:57:10] Set ATHENA_CORE_NUMBER=4
[2025-07-25 20:57:10] Starting ATLAS job with PandaID=6741692359
[2025-07-25 20:57:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 22:40:47]  *** The last 200 lines of the pilot log: ***
[2025-07-25 22:40:47] 2025-07-25 20:40:12,315 | INFO     | monitor loop #474: job 0:6741692359 is in state 'finished'
[2025-07-25 22:40:47] 2025-07-25 20:40:12,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:40:47] 2025-07-25 20:40:14,818 | INFO     | monitor loop #475: job 0:6741692359 is in state 'finished'
[2025-07-25 22:40:47] 2025-07-25 20:40:14,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,111 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 22:40:47] 2025-07-25 20:40:15,113 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3111.4567499999994
[2025-07-25 22:40:47] 2025-07-25 20:40:15,114 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6741692359/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,114 | INFO     | extracted standard info from prmon json
[2025-07-25 22:40:47] 2025-07-25 20:40:15,114 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 22:40:47] 2025-07-25 20:40:15,115 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 22:40:47] 2025-07-25 20:40:15,115 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 22:40:47] 2025-07-25 20:40:15,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | fitting pss+swap vs Time
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | sum of square deviations: 319447850.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | sum of deviations: 5581416612.999999
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | mean x: 1753472909.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | mean y: 2429341.9801980196
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | -- intersect: -30634379842.173134
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | intersect: -30634379842.173134
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | chi2: 1.5737247499001685
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | sum of square deviations: 274312120.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | sum of deviations: 5328813417.000001
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | mean x: 1753472756.5
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | mean y: 2428489.5833333335
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | -- intersect: -34060700588.275772
[2025-07-25 22:40:47] 2025-07-25 20:40:15,116 | INFO     | intersect: -34060700588.275772
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | chi2: 1.5770999354486719
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | current chi2=1.5770999354486719 (change=-0.2144711487010334 %)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | right removable region: 95
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | sum of square deviations: 274312120.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | sum of deviations: -7822090237.5
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | mean x: 1753473061.5
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | mean y: 2473347.15625
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | -- intersect: 50003269943.66969
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | intersect: 50003269943.66969
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | chi2: 0.09177847853209585
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | current chi2=0.09177847853209585 (change=94.16807300400416 %)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | sum of square deviations: 233641590.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | sum of deviations: -4592757222.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | mean x: 1753473214.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | mean y: 2461197.175824176
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | -- intersect: 34470968140.57598
[2025-07-25 22:40:47] 2025-07-25 20:40:15,117 | INFO     | intersect: 34470968140.57598
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | chi2: 0.07325268427066067
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | current chi2=0.07325268427066067 (change=20.1853359935102 %)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | left removable region: 20
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | sum of square deviations: 130793150.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | sum of deviations: 244493795.00000006
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | mean x: 1753473336.0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | mean y: 2439791.973333333
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | -- intersect: -3275356869.013501
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | intersect: -3275356869.013501
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | chi2: 0.0016412715455592784
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | -- intersect: -3275356869.013501
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | current memory leak: 1.87 B/s (using 75 data points, chi2=0.00)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | could have reported an average CPU frequency of 3667 MHz (7 samples)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | ..............................
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | . Timing measurements:
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | . get job = 0 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | . initial setup = 1 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | . payload setup = 4 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | . stage-in = 0 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,118 | INFO     | . payload execution = 6149 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,119 | INFO     | . stage-out = 0 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,119 | INFO     | . log creation = 0 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,119 | INFO     | ..............................
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | 
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | job summary report
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | --------------------------------------------------
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | PanDA job id: 6741692359
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | task id: 45697532
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | errors: (none)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | pilot state: finished 
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | transexitcode: 0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | exeerrorcode: 0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | exeerrordiag: 
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | exitcode: 0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,159 | INFO     | exitmsg: OK
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | cpuconsumptiontime: 23612 s
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | nevents: 400
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | neventsw: 0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | pid: 4045827
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | pgrp: 4045827
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | corecount: 4
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | event service: False
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | sizes: {0: 2397546, 1: 2397546, 4: 2397836, 11: 2397864, 6157: 2424980, 6158: 2434168, 6164: 2434306}
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | --------------------------------------------------
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | 
[2025-07-25 22:40:47] 2025-07-25 20:40:15,160 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-25 22:40:47] 2025-07-25 20:40:15,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | job 6741692359 has completed (purged errors)
[2025-07-25 22:40:47] 2025-07-25 20:40:15,176 | INFO     | overall cleanup function is called
[2025-07-25 22:40:47] 2025-07-25 20:40:16,183 | INFO     | --- collectZombieJob: --- 10, [4045827]
[2025-07-25 22:40:47] 2025-07-25 20:40:16,184 | INFO     | zombie collector waiting for pid 4045827
[2025-07-25 22:40:47] 2025-07-25 20:40:16,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 22:40:47] 2025-07-25 20:40:16,184 | INFO     | collected zombie processes
[2025-07-25 22:40:47] 2025-07-25 20:40:16,184 | INFO     | will attempt to kill all subprocesses of pid=4045827
[2025-07-25 22:40:47] 2025-07-25 20:40:16,234 | INFO     | process IDs to be killed: [4045827] (in reverse order)
[2025-07-25 22:40:47] 2025-07-25 20:40:16,266 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 22:40:47] 2025-07-25 20:40:16,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 22:40:47] 2025-07-25 20:40:16,268 | INFO     | did not find any defunct processes belonging to 4045827
[2025-07-25 22:40:47] 2025-07-25 20:40:16,270 | INFO     | did not find any defunct processes belonging to 4045827
[2025-07-25 22:40:47] 2025-07-25 20:40:16,270 | INFO     | ready for new job
[2025-07-25 22:40:47] 2025-07-25 20:40:16,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 22:40:47] 2025-07-25 20:40:16,270 | INFO     | ***************************************
[2025-07-25 22:40:47] 2025-07-25 20:40:16,270 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 22:40:47] 2025-07-25 20:40:16,270 | INFO     | ***************************************
[2025-07-25 22:40:47] 2025-07-25 20:40:16,270 | INFO     | 
[2025-07-25 22:40:47] 2025-07-25 20:40:16,271 | INFO     | architecture information:
[2025-07-25 22:40:47] 2025-07-25 20:40:16,271 | INFO     | executing command: cat /etc/os-release
[2025-07-25 22:40:47] 2025-07-25 20:40:16,283 | INFO     | cat /etc/os-release:
[2025-07-25 22:40:47] NAME="CentOS Linux"
[2025-07-25 22:40:47] VERSION="7 (Core)"
[2025-07-25 22:40:47] ID="centos"
[2025-07-25 22:40:47] ID_LIKE="rhel fedora"
[2025-07-25 22:40:47] VERSION_ID="7"
[2025-07-25 22:40:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 22:40:47] ANSI_COLOR="0;31"
[2025-07-25 22:40:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 22:40:47] HOME_URL="https://www.centos.org/"
[2025-07-25 22:40:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 22:40:47] 
[2025-07-25 22:40:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 22:40:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 22:40:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 22:40:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 22:40:47] 
[2025-07-25 22:40:47] 2025-07-25 20:40:16,283 | INFO     | ***************************************
[2025-07-25 22:40:47] 2025-07-25 20:40:16,787 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-25 22:40:47] 2025-07-25 20:40:16,802 | INFO     | sufficient remaining disk space (320616792064 B)
[2025-07-25 22:40:47] 2025-07-25 20:40:16,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 22:40:47] 2025-07-25 20:40:16,802 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 22:40:47] 2025-07-25 20:40:16,802 | INFO     | update_server=False
[2025-07-25 22:40:47] 2025-07-25 20:40:16,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 22:40:47] 2025-07-25 20:40:16,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:40:47] 2025-07-25 20:40:16,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:40:47] 2025-07-25 20:40:16,803 | INFO     | aborting loop
[2025-07-25 22:40:47] 2025-07-25 20:40:16,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 22:40:47] 2025-07-25 20:40:17,121 | INFO     | all payload control threads have been joined
[2025-07-25 22:40:47] 2025-07-25 20:40:17,808 | INFO     | [job] retrieve thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:17,808 | INFO     | [job] queue monitor thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:17,809 | INFO     | [job] job monitor thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:17,858 | INFO     | all data control threads have been joined
[2025-07-25 22:40:47] 2025-07-25 20:40:17,994 | INFO     | [payload] failed_post thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,077 | INFO     | all job control threads have been joined
[2025-07-25 22:40:47] 2025-07-25 20:40:18,126 | INFO     | [payload] control thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,396 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,768 | INFO     | [job] validate thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,859 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,861 | INFO     | [data] copytool_out thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,864 | INFO     | [data] control thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:18,933 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:19,034 | INFO     | [payload] validate_post thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:19,048 | INFO     | [data] copytool_in thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:19,083 | INFO     | [job] control thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:19,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 22:40:47] 2025-07-25 20:40:23,402 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 22:40:47] 2025-07-25 20:40:24,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904254355264)>', '<ExcThread(monitor, started 139903752972032)>']
[2025-07-25 22:40:47] 2025-07-25 20:40:29,725 | INFO     | all workflow threads have been joined
[2025-07-25 22:40:47] 2025-07-25 20:40:29,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 22:40:47] 2025-07-25 20:40:29,726 | INFO     | traces error code: 0
[2025-07-25 22:40:47] 2025-07-25 20:40:29,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 22:40:47] 2025-07-25 20:40:47,208 | INFO     | PID=4039201 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 22:40:47] 2025-07-25 20:40:47,208 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 22:40:47] 2025-07-25 20:40:47,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 22:40:47] 2025-07-25 20:40:47,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 22:40:47] 2025-07-25 20:40:47,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 22:40:47] 2025-07-25 20:40:47,208 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 22:40:47] 2025-07-25 20:40:47,208 | INFO     | [monitor] control thread has ended
[2025-07-25 22:40:47] 2025-07-25 20:40:47,273 [wrapper] ==== pilot stdout END ====
[2025-07-25 22:40:47] 2025-07-25 20:40:47,277 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 22:40:47] 2025-07-25 20:40:47,280 [wrapper] pilotpid: 4039201
[2025-07-25 22:40:47] 2025-07-25 20:40:47,284 [wrapper] Pilot exit status: 0
[2025-07-25 22:40:47] 2025-07-25 20:40:47,295 [wrapper] pandaids: 6741692359
[2025-07-25 22:40:47] 2025-07-25 20:40:47,316 [wrapper] cleanup supervisor_pilot 4058596 4039202
[2025-07-25 22:40:47] 2025-07-25 20:40:47,319 [wrapper] Test setup, not cleaning
[2025-07-25 22:40:47] 2025-07-25 20:40:47,323 [wrapper] apfmon messages muted
[2025-07-25 22:40:47] 2025-07-25 20:40:47,326 [wrapper] ==== wrapper stdout END ====
[2025-07-25 22:40:47] 2025-07-25 20:40:47,329 [wrapper] ==== wrapper stderr END ====
[2025-07-25 22:40:47]  *** Error codes and diagnostics ***
[2025-07-25 22:40:47]     "exeErrorCode": 0,
[2025-07-25 22:40:47]     "exeErrorDiag": "",
[2025-07-25 22:40:47]     "pilotErrorCode": 0,
[2025-07-25 22:40:47]     "pilotErrorDiag": "",
[2025-07-25 22:40:47]  *** Listing of results directory ***
[2025-07-25 22:40:47] total 601952
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc    530466 Jul 21 23:11 pilot3.tar.gz
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc      5112 Jul 21 23:20 queuedata.json
[2025-07-25 22:40:47] -rwx------ 1 boinc boinc     36292 Jul 21 23:22 runpilot2-wrapper.sh
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc       100 Jul 25 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 22:40:47] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 20:57 run_atlas
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc       105 Jul 25 20:57 job.xml
[2025-07-25 22:40:47] -rw-r--r-- 2 boinc boinc 328079933 Jul 25 20:57 EVNT.45697530._000051.pool.root.1
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc      6856 Jul 25 20:57 init_data.xml
[2025-07-25 22:40:47] drwxrwx--x 2 boinc boinc      4096 Jul 25 20:57 shared
[2025-07-25 22:40:47] -rw-r--r-- 2 boinc boinc    542901 Jul 25 20:57 input.tar.gz
[2025-07-25 22:40:47] -rw-r--r-- 2 boinc boinc     15095 Jul 25 20:57 start_atlas.sh
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc         0 Jul 25 20:57 boinc_lockfile
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc      2611 Jul 25 20:57 pandaJob.out
[2025-07-25 22:40:47] -rw------- 1 boinc boinc    979993 Jul 25 20:57 agis_schedconf.cvmfs.json
[2025-07-25 22:40:47] -rw------- 1 boinc boinc   1593052 Jul 25 20:57 agis_ddmendpoints.agis.ALL.json
[2025-07-25 22:40:47] drwx------ 4 boinc boinc      4096 Jul 25 20:57 pilot3
[2025-07-25 22:40:47] -rw------- 1 boinc boinc 282724949 Jul 25 22:39 HITS.45697532._001268.pool.root.1
[2025-07-25 22:40:47] -rw------- 1 boinc boinc        95 Jul 25 22:39 pilot_heartbeat.json
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc       529 Jul 25 22:39 boinc_task_state.xml
[2025-07-25 22:40:47] -rw------- 1 boinc boinc      1021 Jul 25 22:40 memory_monitor_summary.json
[2025-07-25 22:40:47] -rw------- 1 boinc boinc    264983 Jul 25 22:40 log.45697532._001268.job.log.tgz.1
[2025-07-25 22:40:47] -rw------- 1 boinc boinc      7758 Jul 25 22:40 heartbeat.json
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc      8192 Jul 25 22:40 boinc_mmap_file
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc        27 Jul 25 22:40 wrapper_checkpoint.txt
[2025-07-25 22:40:47] -rw------- 1 boinc boinc       817 Jul 25 22:40 pilotlog.txt
[2025-07-25 22:40:47] -rw------- 1 boinc boinc    592128 Jul 25 22:40 log.45697532._001268.job.log.1
[2025-07-25 22:40:47] -rw------- 1 boinc boinc       357 Jul 25 22:40 output.list
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc       620 Jul 25 22:40 runtime_log
[2025-07-25 22:40:47] -rw------- 1 boinc boinc    880640 Jul 25 22:40 result.tar.gz
[2025-07-25 22:40:47] -rw------- 1 boinc boinc       662 Jul 25 22:40 tvlKDmf8Cy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhStKDmDi6RZm.diag
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc      8749 Jul 25 22:40 runtime_log.err
[2025-07-25 22:40:47] -rw-r--r-- 1 boinc boinc     21130 Jul 25 22:40 stderr.txt
[2025-07-25 22:40:47] HITS file was successfully produced:
[2025-07-25 22:40:47] -rw------- 1 boinc boinc 282724949 Jul 25 22:39 shared/HITS.pool.root.1
[2025-07-25 22:40:47]  *** Contents of shared directory: ***
[2025-07-25 22:40:47] total 597908
[2025-07-25 22:40:47] -rw-r--r-- 2 boinc boinc 328079933 Jul 25 20:57 ATLAS.root_0
[2025-07-25 22:40:47] -rw-r--r-- 2 boinc boinc    542901 Jul 25 20:57 input.tar.gz
[2025-07-25 22:40:47] -rw-r--r-- 2 boinc boinc     15095 Jul 25 20:57 start_atlas.sh
[2025-07-25 22:40:47] -rw------- 1 boinc boinc 282724949 Jul 25 22:39 HITS.pool.root.1
[2025-07-25 22:40:47] -rw------- 1 boinc boinc    880640 Jul 25 22:40 result.tar.gz
22:40:48 (4035480): run_atlas exited; CPU time 23638.553986
22:40:48 (4035480): called boinc_finish(0)

</stderr_txt>
]]>

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