Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:31:52 (498800): wrapper (7.7.26015): starting
03:31:52 (498800): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 03:31:52] Arguments: --nthreads 8
[2025-07-25 03:31:52] Threads: 8
[2025-07-25 03:31:52] Checking for CVMFS
[2025-07-25 03:31:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 03:31:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 03:31:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 03:31:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 03:31:54] 2.13.0.0 1923533 16488 305548 148731 2 396 27452555 32935936 27135 16776704 0 75798498 99.500 126629847 19507 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 03:31:54] CVMFS is ok
[2025-07-25 03:31:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 03:31:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 03:31:54] Further information can be found at the LHC@home message board.
[2025-07-25 03:31:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 03:31:54] Checking for apptainer binary...
[2025-07-25 03:31:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 03:31:54] Running /usr/bin/apptainer --version
[2025-07-25 03:31:54] apptainer version 1.4.1-1.el9
[2025-07-25 03:31:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 03:31:55] c7-3-17.aglt2.org
[2025-07-25 03:31:55] apptainer works
[2025-07-25 03:31:55] Set ATHENA_PROC_NUMBER=8
[2025-07-25 03:31:55] Set ATHENA_CORE_NUMBER=8
[2025-07-25 03:31:55] Starting ATLAS job with PandaID=6741691226
[2025-07-25 03:31:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 06:04:33]  *** The last 200 lines of the pilot log: ***
[2025-07-25 06:04:33] 2025-07-25 10:03:58,776 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3023.996927083333
[2025-07-25 06:04:33] 2025-07-25 10:03:58,794 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741691226/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 06:04:33] 2025-07-25 10:03:58,794 | INFO     | extracted standard info from prmon json
[2025-07-25 06:04:33] 2025-07-25 10:03:58,794 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 06:04:33] 2025-07-25 10:03:58,794 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 06:04:33] 2025-07-25 10:03:58,795 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 06:04:33] 2025-07-25 10:03:58,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 06:04:33] 2025-07-25 10:03:58,797 | INFO     | fitting pss+swap vs Time
[2025-07-25 06:04:33] 2025-07-25 10:03:58,797 | INFO     | sum of square deviations: 1005167212.9729747
[2025-07-25 06:04:33] 2025-07-25 10:03:58,798 | INFO     | sum of deviations: -14745755350.297295
[2025-07-25 06:04:33] 2025-07-25 10:03:58,798 | INFO     | mean x: 1753433324.5135136
[2025-07-25 06:04:33] 2025-07-25 10:03:58,798 | INFO     | mean y: 2236506.3986486485
[2025-07-25 06:04:33] 2025-07-25 10:03:58,799 | INFO     | -- intersect: 25725020230.970734
[2025-07-25 06:04:33] 2025-07-25 10:03:58,799 | INFO     | intersect: 25725020230.970734
[2025-07-25 06:04:33] 2025-07-25 10:03:58,799 | INFO     | chi2: 3.296802931006603
[2025-07-25 06:04:33] 2025-07-25 10:03:58,799 | INFO     | sum of square deviations: 906691557.9720294
[2025-07-25 06:04:33] 2025-07-25 10:03:58,800 | INFO     | sum of deviations: -5150805594.909092
[2025-07-25 06:04:33] 2025-07-25 10:03:58,800 | INFO     | mean x: 1753433172.013986
[2025-07-25 06:04:33] 2025-07-25 10:03:58,800 | INFO     | mean y: 2251000.4545454546
[2025-07-25 06:04:33] 2025-07-25 10:03:58,800 | INFO     | -- intersect: 9963293775.474463
[2025-07-25 06:04:33] 2025-07-25 10:03:58,800 | INFO     | intersect: 9963293775.474463
[2025-07-25 06:04:33] 2025-07-25 10:03:58,800 | INFO     | chi2: 2.5760150904780086
[2025-07-25 06:04:33] 2025-07-25 10:03:58,800 | INFO     | current chi2=2.5760150904780086 (change=21.86323706975468 %)
[2025-07-25 06:04:33] 2025-07-25 10:03:58,801 | INFO     | right removable region: 142
[2025-07-25 06:04:33] 2025-07-25 10:03:58,801 | INFO     | sum of square deviations: 906690337.9720294
[2025-07-25 06:04:33] 2025-07-25 10:03:58,801 | INFO     | sum of deviations: -42642159582.20979
[2025-07-25 06:04:33] 2025-07-25 10:03:58,801 | INFO     | monitor loop #553: job 0:6741691226 is in state 'finished'
[2025-07-25 06:04:33] 2025-07-25 10:03:58,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 06:04:33] 2025-07-25 10:03:58,801 | INFO     | mean x: 1753433477.013986
[2025-07-25 06:04:33] 2025-07-25 10:03:58,802 | INFO     | mean y: 2279318.104895105
[2025-07-25 06:04:33] 2025-07-25 10:03:58,802 | INFO     | -- intersect: 82467247799.90862
[2025-07-25 06:04:33] 2025-07-25 10:03:58,802 | INFO     | intersect: 82467247799.90862
[2025-07-25 06:04:33] 2025-07-25 10:03:58,802 | INFO     | chi2: 1.1537306845313644
[2025-07-25 06:04:33] 2025-07-25 10:03:58,802 | INFO     | current chi2=1.1537306845313644 (change=65.00456021558136 %)
[2025-07-25 06:04:33] 2025-07-25 10:03:58,802 | INFO     | sum of square deviations: 814864750.4710153
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | sum of deviations: -43624430294.594215
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | mean x: 1753433629.5144928
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | mean y: 2280829.797101449
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | -- intersect: 93873739992.48322
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | intersect: 93873739992.48322
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | chi2: 1.0860248256938152
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | current chi2=1.0860248256938152 (change=5.86842837287029 %)
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | left removable region: 20
[2025-07-25 06:04:33] 2025-07-25 10:03:58,803 | INFO     | sum of square deviations: 563019600.4918019
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | sum of deviations: -24182554973.213108
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | mean x: 1753433751.5081968
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | mean y: 2280430.2131147543
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | -- intersect: 75314948143.1939
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | intersect: 75314948143.1939
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | chi2: 0.30137670287475227
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | -- intersect: 75314948143.1939
[2025-07-25 06:04:33] 2025-07-25 10:03:58,804 | INFO     | current memory leak: -42.95 B/s (using 122 data points, chi2=0.30)
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | could have reported an average CPU frequency of 2989 MHz (8 samples)
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | ..............................
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . Timing measurements:
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . get job = 0 s
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . initial setup = 4 s
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . payload setup = 26 s
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . stage-in = 0 s
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . payload execution = 9005 s
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . stage-out = 0 s
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | . log creation = 0 s
[2025-07-25 06:04:33] 2025-07-25 10:03:58,805 | INFO     | ..............................
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | 
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | job summary report
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | --------------------------------------------------
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | PanDA job id: 6741691226
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | task id: 45697532
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | errors: (none)
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | pilot state: finished 
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | transexitcode: 0
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | exeerrorcode: 0
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | exeerrordiag: 
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | exitcode: 0
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | exitmsg: OK
[2025-07-25 06:04:33] 2025-07-25 10:03:59,146 | INFO     | cpuconsumptiontime: 49736 s
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | nevents: 400
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | neventsw: 0
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | pid: 525058
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | pgrp: 525058
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | corecount: 8
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | event service: False
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | sizes: {0: 2397368, 1: 2397567, 12: 2397567, 17: 2397857, 22: 2397885, 9036: 2426198, 9037: 2435252, 9045: 2435390}
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | --------------------------------------------------
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | 
[2025-07-25 06:04:33] 2025-07-25 10:03:59,147 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 06:04:33] 2025-07-25 10:03:59,169 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,169 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,171 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 06:04:33] 2025-07-25 10:03:59,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,171 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 06:04:33] 2025-07-25 10:03:59,171 | INFO     | job 6741691226 has completed (purged errors)
[2025-07-25 06:04:33] 2025-07-25 10:03:59,171 | INFO     | overall cleanup function is called
[2025-07-25 06:04:33] 2025-07-25 10:04:00,180 | INFO     | --- collectZombieJob: --- 10, [525058]
[2025-07-25 06:04:33] 2025-07-25 10:04:00,181 | INFO     | zombie collector waiting for pid 525058
[2025-07-25 06:04:33] 2025-07-25 10:04:00,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 06:04:33] 2025-07-25 10:04:00,181 | INFO     | collected zombie processes
[2025-07-25 06:04:33] 2025-07-25 10:04:00,181 | INFO     | will attempt to kill all subprocesses of pid=525058
[2025-07-25 06:04:33] 2025-07-25 10:04:00,248 | INFO     | PID=507323 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 06:04:33] 2025-07-25 10:04:00,248 | INFO     | .. there are 38 such processes running
[2025-07-25 06:04:33] 2025-07-25 10:04:00,649 | INFO     | process IDs to be killed: [525058] (in reverse order)
[2025-07-25 06:04:33] 2025-07-25 10:04:00,896 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 06:04:33] 2025-07-25 10:04:00,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 06:04:33] 2025-07-25 10:04:00,928 | INFO     | did not find any defunct processes belonging to 525058
[2025-07-25 06:04:33] 2025-07-25 10:04:00,952 | INFO     | did not find any defunct processes belonging to 525058
[2025-07-25 06:04:33] 2025-07-25 10:04:00,953 | INFO     | ready for new job
[2025-07-25 06:04:33] 2025-07-25 10:04:00,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 06:04:33] 2025-07-25 10:04:00,955 | INFO     | ***************************************
[2025-07-25 06:04:33] 2025-07-25 10:04:00,955 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 06:04:33] 2025-07-25 10:04:00,955 | INFO     | ***************************************
[2025-07-25 06:04:33] 2025-07-25 10:04:00,955 | INFO     | 
[2025-07-25 06:04:33] 2025-07-25 10:04:00,961 | INFO     | architecture information:
[2025-07-25 06:04:33] 2025-07-25 10:04:00,961 | INFO     | executing command: cat /etc/os-release
[2025-07-25 06:04:33] 2025-07-25 10:04:00,984 | INFO     | cat /etc/os-release:
[2025-07-25 06:04:33] NAME="CentOS Linux"
[2025-07-25 06:04:33] VERSION="7 (Core)"
[2025-07-25 06:04:33] ID="centos"
[2025-07-25 06:04:33] ID_LIKE="rhel fedora"
[2025-07-25 06:04:33] VERSION_ID="7"
[2025-07-25 06:04:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 06:04:33] ANSI_COLOR="0;31"
[2025-07-25 06:04:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 06:04:33] HOME_URL="https://www.centos.org/"
[2025-07-25 06:04:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 06:04:33] 
[2025-07-25 06:04:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 06:04:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 06:04:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 06:04:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 06:04:33] 
[2025-07-25 06:04:33] 2025-07-25 10:04:00,984 | INFO     | ***************************************
[2025-07-25 06:04:33] 2025-07-25 10:04:01,487 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 06:04:33] 2025-07-25 10:04:01,508 | INFO     | sufficient remaining disk space (75236376576 B)
[2025-07-25 06:04:33] 2025-07-25 10:04:01,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 06:04:33] 2025-07-25 10:04:01,508 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 06:04:33] 2025-07-25 10:04:01,509 | INFO     | update_server=False
[2025-07-25 06:04:33] 2025-07-25 10:04:01,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 06:04:33] 2025-07-25 10:04:01,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 06:04:33] 2025-07-25 10:04:01,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 06:04:33] 2025-07-25 10:04:01,687 | INFO     | all data control threads have been joined
[2025-07-25 06:04:33] 2025-07-25 10:04:02,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 06:04:33] 2025-07-25 10:04:02,318 | INFO     | aborting loop
[2025-07-25 06:04:33] 2025-07-25 10:04:02,500 | INFO     | all payload control threads have been joined
[2025-07-25 06:04:33] 2025-07-25 10:04:02,515 | INFO     | [job] retrieve thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:02,679 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:02,682 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:02,692 | INFO     | [data] control thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:02,982 | INFO     | all job control threads have been joined
[2025-07-25 06:04:33] 2025-07-25 10:04:03,232 | INFO     | [data] copytool_in thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,323 | INFO     | [job] job monitor thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,441 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,463 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,506 | INFO     | [payload] control thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,515 | INFO     | [data] copytool_out thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,767 | INFO     | [payload] failed_post thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,827 | INFO     | [job] validate thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,870 | INFO     | [payload] validate_post thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:03,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 06:04:33] 2025-07-25 10:04:03,988 | INFO     | [job] control thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:04,883 | INFO     | [job] queue monitor thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:05,517 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 06:04:33] 2025-07-25 10:04:06,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545166690112)>', '<ExcThread(monitor, started 140544533583616)>']
[2025-07-25 06:04:33] 2025-07-25 10:04:11,942 | INFO     | all workflow threads have been joined
[2025-07-25 06:04:33] 2025-07-25 10:04:11,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 06:04:33] 2025-07-25 10:04:11,943 | INFO     | traces error code: 0
[2025-07-25 06:04:33] 2025-07-25 10:04:11,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 06:04:33] 2025-07-25 10:04:32,963 | INFO     | PID=507323 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-25 06:04:33] 2025-07-25 10:04:32,964 | INFO     | .. there are 38 such processes running
[2025-07-25 06:04:33] 2025-07-25 10:04:32,964 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 06:04:33] 2025-07-25 10:04:32,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 06:04:33] 2025-07-25 10:04:32,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 06:04:33] 2025-07-25 10:04:32,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 06:04:33] 2025-07-25 10:04:32,964 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 06:04:33] 2025-07-25 10:04:32,964 | INFO     | [monitor] control thread has ended
[2025-07-25 06:04:33] 2025-07-25 10:04:33,092 [wrapper] ==== pilot stdout END ====
[2025-07-25 06:04:33] 2025-07-25 10:04:33,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 06:04:33] 2025-07-25 10:04:33,103 [wrapper] pilotpid: 507323
[2025-07-25 06:04:33] 2025-07-25 10:04:33,108 [wrapper] Pilot exit status: 0
[2025-07-25 06:04:33] 2025-07-25 10:04:33,128 [wrapper] pandaids: 6741691226
[2025-07-25 06:04:33] 2025-07-25 10:04:33,249 [wrapper] cleanup supervisor_pilot 1140185 507324
[2025-07-25 06:04:33] 2025-07-25 10:04:33,253 [wrapper] Test setup, not cleaning
[2025-07-25 06:04:33] 2025-07-25 10:04:33,256 [wrapper] apfmon messages muted
[2025-07-25 06:04:33] 2025-07-25 10:04:33,260 [wrapper] ==== wrapper stdout END ====
[2025-07-25 06:04:33] 2025-07-25 10:04:33,263 [wrapper] ==== wrapper stderr END ====
[2025-07-25 06:04:33]  *** Error codes and diagnostics ***
[2025-07-25 06:04:33]     "exeErrorCode": 0,
[2025-07-25 06:04:33]     "exeErrorDiag": "",
[2025-07-25 06:04:33]     "pilotErrorCode": 0,
[2025-07-25 06:04:33]     "pilotErrorDiag": "",
[2025-07-25 06:04:33]  *** Listing of results directory ***
[2025-07-25 06:04:33] total 609188
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 16:41 pilot3.tar.gz
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 16:59 queuedata.json
[2025-07-25 06:04:33] -rwx------. 1 boincer umatlas     36292 Jul 21 16:59 runpilot2-wrapper.sh
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas       100 Jul 25 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 06:04:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 03:31 run_atlas
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas       105 Jul 25 03:31 job.xml
[2025-07-25 06:04:33] -rw-r--r--. 2 boincer umatlas 331052647 Jul 25 03:31 EVNT.45697530._000022.pool.root.1
[2025-07-25 06:04:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 03:31 start_atlas.sh
[2025-07-25 06:04:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 03:31 shared
[2025-07-25 06:04:33] -rw-r--r--. 2 boincer umatlas    542901 Jul 25 03:31 input.tar.gz
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas         0 Jul 25 03:31 boinc_lockfile
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas      2609 Jul 25 03:31 pandaJob.out
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas    979709 Jul 25 03:32 agis_schedconf.cvmfs.json
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas   1593052 Jul 25 03:32 agis_ddmendpoints.agis.ALL.json
[2025-07-25 06:04:33] drwx------. 4 boincer umatlas      4096 Jul 25 03:32 pilot3
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas 286640377 Jul 25 06:03 HITS.45697532._000298.pool.root.1
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas       530 Jul 25 06:03 boinc_task_state.xml
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas      6931 Jul 25 06:03 init_data.xml
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas      1046 Jul 25 06:03 memory_monitor_summary.json
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas        95 Jul 25 06:03 pilot_heartbeat.json
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas    357133 Jul 25 06:03 log.45697532._000298.job.log.tgz.1
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas      7775 Jul 25 06:03 heartbeat.json
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 06:04 boinc_mmap_file
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas        27 Jul 25 06:04 wrapper_checkpoint.txt
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas       892 Jul 25 06:04 pilotlog.txt
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas    758111 Jul 25 06:04 log.45697532._000298.job.log.1
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas       357 Jul 25 06:04 output.list
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas       620 Jul 25 06:04 runtime_log
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas   1136640 Jul 25 06:04 result.tar.gz
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 06:04 runtime_log.err
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas       651 Jul 25 06:04 DqVLDmqmCy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxNtKDmFavOPn.diag
[2025-07-25 06:04:33] -rw-r--r--. 1 boincer umatlas     21285 Jul 25 06:04 stderr.txt
[2025-07-25 06:04:33] HITS file was successfully produced:
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas 286640377 Jul 25 06:03 shared/HITS.pool.root.1
[2025-07-25 06:04:33]  *** Contents of shared directory: ***
[2025-07-25 06:04:33] total 604888
[2025-07-25 06:04:33] -rw-r--r--. 2 boincer umatlas 331052647 Jul 25 03:31 ATLAS.root_0
[2025-07-25 06:04:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 03:31 start_atlas.sh
[2025-07-25 06:04:33] -rw-r--r--. 2 boincer umatlas    542901 Jul 25 03:31 input.tar.gz
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas 286640377 Jul 25 06:03 HITS.pool.root.1
[2025-07-25 06:04:33] -rw-------. 1 boincer umatlas   1136640 Jul 25 06:04 result.tar.gz
06:04:34 (498800): run_atlas exited; CPU time 50011.438084
06:04:34 (498800): called boinc_finish(0)

</stderr_txt>
]]>

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