Name 4ZsMDmwbIz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLpNLDmCtXNXn_2
Workunit 233776917
Created 25 Jul 2025, 3:34:48 UTC
Sent 25 Jul 2025, 6:44:40 UTC
Report deadline 2 Aug 2025, 6:44:40 UTC
Received 27 Jul 2025, 18:25:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10854592
Run time 1 hours 4 min 18 sec
CPU time 12 hours 3 min 3 sec
Validate state Valid
Credit 135.04
Device peak FLOPS 21.27 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.48 GB
Peak swap size 38.17 GB
Peak disk usage 486.41 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:19:18 (2981692): wrapper (7.7.26015): starting
16:19:18 (2981692): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 16:19:18] Arguments: --nthreads 4
[2025-07-27 16:19:18] Threads: 4
[2025-07-27 16:19:18] Checking for CVMFS
[2025-07-27 16:19:18] No cvmfs_config command found, will try listing directly
[2025-07-27 16:19:18] CVMFS is ok
[2025-07-27 16:19:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 16:19:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 16:19:18] Further information can be found at the LHC@home message board.
[2025-07-27 16:19:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:19:18] Checking for apptainer binary...
[2025-07-27 16:19:18] which: no apptainer in ((null))
[2025-07-27 16:19:18] apptainer is not installed, using version from CVMFS
[2025-07-27 16:19:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:19:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-07-27 16:19:18] apptainer works
[2025-07-27 16:19:18] Set ATHENA_PROC_NUMBER=4
[2025-07-27 16:19:18] Set ATHENA_CORE_NUMBER=4
[2025-07-27 16:19:18] Starting ATLAS job with PandaID=6744933745
[2025-07-27 16:19:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:23:42]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:23:42] 2025-07-27 17:23:07,189 | INFO     | monitor loop #761: job 0:6744933745 is in state 'finished'
[2025-07-27 19:23:42] 2025-07-27 17:23:07,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,438 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:23:42] 2025-07-27 17:23:09,460 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2694.695164062498
[2025-07-27 19:23:42] 2025-07-27 17:23:09,485 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6744933745/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,486 | INFO     | extracted standard info from prmon json
[2025-07-27 19:23:42] 2025-07-27 17:23:09,486 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:23:42] 2025-07-27 17:23:09,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:23:42] 2025-07-27 17:23:09,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:23:42] 2025-07-27 17:23:09,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:23:42] 2025-07-27 17:23:09,490 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:23:42] 2025-07-27 17:23:09,491 | INFO     | sum of square deviations: 1808350185.0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,492 | INFO     | sum of deviations: 9073026174.0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,492 | INFO     | mean x: 1753631465.5
[2025-07-27 19:23:42] 2025-07-27 17:23:09,492 | INFO     | mean y: 2326689.511111111
[2025-07-27 19:23:42] 2025-07-27 17:23:09,492 | INFO     | -- intersect: -8796159531.801981
[2025-07-27 19:23:42] 2025-07-27 17:23:09,492 | INFO     | intersect: -8796159531.801981
[2025-07-27 19:23:42] 2025-07-27 17:23:09,493 | INFO     | chi2: 1.4266929484486381
[2025-07-27 19:23:42] 2025-07-27 17:23:09,493 | INFO     | sum of square deviations: 1661798600.0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,494 | INFO     | sum of deviations: 8775245402.000004
[2025-07-27 19:23:42] 2025-07-27 17:23:09,494 | INFO     | mean x: 1753631313.0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,494 | INFO     | mean y: 2326379.6342857145
[2025-07-27 19:23:42] 2025-07-27 17:23:09,494 | INFO     | -- intersect: -9257848178.345531
[2025-07-27 19:23:42] 2025-07-27 17:23:09,494 | INFO     | intersect: -9257848178.345531
[2025-07-27 19:23:42] 2025-07-27 17:23:09,495 | INFO     | chi2: 1.4275369766777108
[2025-07-27 19:23:42] 2025-07-27 17:23:09,495 | INFO     | current chi2=1.4275369766777108 (change=-0.05915976734801163 %)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,495 | INFO     | right removable region: 174
[2025-07-27 19:23:42] 2025-07-27 17:23:09,495 | INFO     | sum of square deviations: 1661798600.0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,496 | INFO     | sum of deviations: -14976282203.0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,496 | INFO     | mean x: 1753631618.0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,496 | INFO     | mean y: 2351367.7485714285
[2025-07-27 19:23:42] 2025-07-27 17:23:09,496 | INFO     | -- intersect: 15806241196.077646
[2025-07-27 19:23:42] 2025-07-27 17:23:09,497 | INFO     | intersect: 15806241196.077646
[2025-07-27 19:23:42] 2025-07-27 17:23:09,497 | INFO     | chi2: 0.0232978605447893
[2025-07-27 19:23:42] 2025-07-27 17:23:09,497 | INFO     | current chi2=0.0232978605447893 (change=98.36700247449018 %)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,497 | INFO     | sum of square deviations: 1523386702.5
[2025-07-27 19:23:42] 2025-07-27 17:23:09,498 | INFO     | sum of deviations: -13443609165.5
[2025-07-27 19:23:42] 2025-07-27 17:23:09,498 | INFO     | mean x: 1753631770.5
[2025-07-27 19:23:42] 2025-07-27 17:23:09,498 | INFO     | mean y: 2349671.8529411764
[2025-07-27 19:23:42] 2025-07-27 17:23:09,499 | INFO     | -- intersect: 15477829472.298286
[2025-07-27 19:23:42] 2025-07-27 17:23:09,499 | INFO     | intersect: 15477829472.298286
[2025-07-27 19:23:42] 2025-07-27 17:23:09,499 | INFO     | chi2: 0.022979807229209056
[2025-07-27 19:23:42] 2025-07-27 17:23:09,499 | INFO     | current chi2=0.022979807229209056 (change=1.365161041155683 %)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,499 | INFO     | left removable region: 20
[2025-07-27 19:23:42] 2025-07-27 17:23:09,499 | INFO     | sum of square deviations: 1132458442.5
[2025-07-27 19:23:42] 2025-07-27 17:23:09,500 | INFO     | sum of deviations: -8157081680.500002
[2025-07-27 19:23:42] 2025-07-27 17:23:09,500 | INFO     | mean x: 1753631892.5
[2025-07-27 19:23:42] 2025-07-27 17:23:09,500 | INFO     | mean y: 2343739.9935064935
[2025-07-27 19:23:42] 2025-07-27 17:23:09,500 | INFO     | -- intersect: 12633728740.818645
[2025-07-27 19:23:42] 2025-07-27 17:23:09,501 | INFO     | intersect: 12633728740.818645
[2025-07-27 19:23:42] 2025-07-27 17:23:09,501 | INFO     | chi2: 0.015061944148896106
[2025-07-27 19:23:42] 2025-07-27 17:23:09,501 | INFO     | -- intersect: 12633728740.818645
[2025-07-27 19:23:42] 2025-07-27 17:23:09,501 | INFO     | current memory leak: -7.20 B/s (using 154 data points, chi2=0.02)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,501 | INFO     | could have reported an average CPU frequency of 2711 MHz (10 samples)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | ..............................
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . Timing measurements:
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . get job = 0 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . initial setup = 1 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . payload setup = 9 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . stage-in = 0 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . payload execution = 10976 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . stage-out = 2 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | . log creation = 0 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,502 | INFO     | ..............................
[2025-07-27 19:23:42] 2025-07-27 17:23:09,604 | INFO     | 
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | job summary report
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | --------------------------------------------------
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | PanDA job id: 6744933745
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | task id: 45743349
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | errors: (none)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | pilot state: finished 
[2025-07-27 19:23:42] 2025-07-27 17:23:09,605 | INFO     | transexitcode: 0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | exeerrorcode: 0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | exeerrordiag: 
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | exitcode: 0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | exitmsg: OK
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | cpuconsumptiontime: 41951 s
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | nevents: 400
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | neventsw: 0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | pid: 3001133
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | pgrp: 3001133
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | corecount: 4
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | event service: False
[2025-07-27 19:23:42] 2025-07-27 17:23:09,606 | INFO     | sizes: {0: 2396644, 1: 2397511, 8: 2397773, 12: 2397801, 10990: 2427552, 10992: 2436756, 11000: 2436894}
[2025-07-27 19:23:42] 2025-07-27 17:23:09,607 | INFO     | --------------------------------------------------
[2025-07-27 19:23:42] 2025-07-27 17:23:09,607 | INFO     | 
[2025-07-27 19:23:42] 2025-07-27 17:23:09,607 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-07-27 19:23:42] 2025-07-27 17:23:09,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:23:42] 2025-07-27 17:23:09,640 | INFO     | job 6744933745 has completed (purged errors)
[2025-07-27 19:23:42] 2025-07-27 17:23:09,640 | INFO     | overall cleanup function is called
[2025-07-27 19:23:42] 2025-07-27 17:23:10,650 | INFO     | --- collectZombieJob: --- 10, [3001133]
[2025-07-27 19:23:42] 2025-07-27 17:23:10,650 | INFO     | zombie collector waiting for pid 3001133
[2025-07-27 19:23:42] 2025-07-27 17:23:10,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:23:42] 2025-07-27 17:23:10,650 | INFO     | collected zombie processes
[2025-07-27 19:23:42] 2025-07-27 17:23:10,650 | INFO     | will attempt to kill all subprocesses of pid=3001133
[2025-07-27 19:23:42] 2025-07-27 17:23:11,352 | INFO     | process IDs to be killed: [3001133] (in reverse order)
[2025-07-27 19:23:42] 2025-07-27 17:23:11,605 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:23:42] 2025-07-27 17:23:11,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:23:42] 2025-07-27 17:23:11,631 | INFO     | did not find any defunct processes belonging to 3001133
[2025-07-27 19:23:42] 2025-07-27 17:23:11,651 | INFO     | did not find any defunct processes belonging to 3001133
[2025-07-27 19:23:42] 2025-07-27 17:23:11,651 | INFO     | ready for new job
[2025-07-27 19:23:42] 2025-07-27 17:23:11,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:23:42] 2025-07-27 17:23:11,654 | INFO     | ***************************************
[2025-07-27 19:23:42] 2025-07-27 17:23:11,656 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:23:42] 2025-07-27 17:23:11,656 | INFO     | ***************************************
[2025-07-27 19:23:42] 2025-07-27 17:23:11,656 | INFO     | 
[2025-07-27 19:23:42] 2025-07-27 17:23:11,665 | INFO     | architecture information:
[2025-07-27 19:23:42] 2025-07-27 17:23:11,665 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:23:42] 2025-07-27 17:23:11,689 | INFO     | cat /etc/os-release:
[2025-07-27 19:23:42] NAME="CentOS Linux"
[2025-07-27 19:23:42] VERSION="7 (Core)"
[2025-07-27 19:23:42] ID="centos"
[2025-07-27 19:23:42] ID_LIKE="rhel fedora"
[2025-07-27 19:23:42] VERSION_ID="7"
[2025-07-27 19:23:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:23:42] ANSI_COLOR="0;31"
[2025-07-27 19:23:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:23:42] HOME_URL="https://www.centos.org/"
[2025-07-27 19:23:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:23:42] 
[2025-07-27 19:23:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:23:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:23:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:23:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:23:42] 
[2025-07-27 19:23:42] 2025-07-27 17:23:11,690 | INFO     | ***************************************
[2025-07-27 19:23:42] 2025-07-27 17:23:12,193 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-07-27 19:23:42] 2025-07-27 17:23:12,216 | INFO     | sufficient remaining disk space (3266212528128 B)
[2025-07-27 19:23:42] 2025-07-27 17:23:12,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:23:42] 2025-07-27 17:23:12,217 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:23:42] 2025-07-27 17:23:12,217 | INFO     | update_server=False
[2025-07-27 19:23:42] 2025-07-27 17:23:12,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:23:42] 2025-07-27 17:23:12,344 | INFO     | all payload control threads have been joined
[2025-07-27 19:23:42] 2025-07-27 17:23:12,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:23:42] 2025-07-27 17:23:12,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:23:42] 2025-07-27 17:23:12,833 | INFO     | all data control threads have been joined
[2025-07-27 19:23:42] 2025-07-27 17:23:13,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:23:42] 2025-07-27 17:23:13,205 | INFO     | aborting loop
[2025-07-27 19:23:42] 2025-07-27 17:23:13,222 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:13,349 | INFO     | [payload] control thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:13,388 | INFO     | all job control threads have been joined
[2025-07-27 19:23:42] 2025-07-27 17:23:13,453 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:13,520 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:13,604 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:13,838 | INFO     | [data] control thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:13,937 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:14,210 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:14,232 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:14,298 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:14,393 | INFO     | [job] control thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:14,398 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:14,490 | INFO     | [job] validate thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:14,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:23:42] 2025-07-27 17:23:15,620 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:16,495 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:23,045 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:23:42] 2025-07-27 17:23:24,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:23:42] 2025-07-27 17:23:25,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22893740570432)>', '<ExcThread(monitor, started 22893490546432)>']
[2025-07-27 19:23:42] 2025-07-27 17:23:30,454 | INFO     | all workflow threads have been joined
[2025-07-27 19:23:42] 2025-07-27 17:23:30,454 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:23:42] 2025-07-27 17:23:30,454 | INFO     | traces error code: 0
[2025-07-27 19:23:42] 2025-07-27 17:23:30,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:23:42] 2025-07-27 17:23:41,961 | INFO     | PID=2993273 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 19:23:42] 2025-07-27 17:23:41,962 | INFO     | .. there are 24 such processes running
[2025-07-27 19:23:42] 2025-07-27 17:23:41,965 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:23:42] 2025-07-27 17:23:41,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:23:42] 2025-07-27 17:23:41,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:23:42] 2025-07-27 17:23:41,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:23:42] 2025-07-27 17:23:41,965 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 19:23:42] 2025-07-27 17:23:41,965 | INFO     | [monitor] control thread has ended
[2025-07-27 19:23:42] 2025-07-27 17:23:42,225 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:23:42] 2025-07-27 17:23:42,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:23:42] 2025-07-27 17:23:42,234 [wrapper] pilotpid: 2993273
[2025-07-27 19:23:42] 2025-07-27 17:23:42,239 [wrapper] Pilot exit status: 0
[2025-07-27 19:23:42] 2025-07-27 17:23:42,255 [wrapper] pandaids: 6744933745
[2025-07-27 19:23:42] 2025-07-27 17:23:42,404 [wrapper] cleanup supervisor_pilot 3922359 2993275
[2025-07-27 19:23:42] 2025-07-27 17:23:42,408 [wrapper] Test setup, not cleaning
[2025-07-27 19:23:42] 2025-07-27 17:23:42,414 [wrapper] apfmon messages muted
[2025-07-27 19:23:42] 2025-07-27 17:23:42,419 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:23:42] 2025-07-27 17:23:42,423 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:23:42]  *** Error codes and diagnostics ***
[2025-07-27 19:23:42]     "exeErrorCode": 0,
[2025-07-27 19:23:42]     "exeErrorDiag": "",
[2025-07-27 19:23:42]     "pilotErrorCode": 0,
[2025-07-27 19:23:42]     "pilotErrorDiag": "",
[2025-07-27 19:23:42]  *** Listing of results directory ***
[2025-07-27 19:23:42] total 350608
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc      5112 Jul 24 23:24 queuedata.json
[2025-07-27 19:23:42] -rwx------ 1 boinc boinc     36292 Jul 24 23:24 runpilot2-wrapper.sh
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc    530466 Jul 24 23:24 pilot3.tar.gz
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc       100 Jul 27 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:23:42] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 16:19 run_atlas
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc       105 Jul 27 16:19 job.xml
[2025-07-27 19:23:42] -rw-r--r-- 2 boinc boinc 147086435 Jul 27 16:19 EVNT.45743347._000571.pool.root.1
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc      6686 Jul 27 16:19 init_data.xml
[2025-07-27 19:23:42] -rw-r--r-- 2 boinc boinc     15095 Jul 27 16:19 start_atlas.sh
[2025-07-27 19:23:42] drwxrwx--x 2 boinc boinc      4096 Jul 27 16:19 shared
[2025-07-27 19:23:42] -rw-r--r-- 2 boinc boinc    542878 Jul 27 16:19 input.tar.gz
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc         0 Jul 27 16:19 boinc_lockfile
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc      2561 Jul 27 16:19 pandaJob.out
[2025-07-27 19:23:42] -rw------- 1 boinc boinc    980109 Jul 27 16:19 agis_schedconf.cvmfs.json
[2025-07-27 19:23:42] drwx------ 4 boinc boinc      4096 Jul 27 16:19 pilot3
[2025-07-27 19:23:42] -rw------- 1 boinc boinc 205401528 Jul 27 19:22 HITS.45743349._010356.pool.root.1
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc       530 Jul 27 19:22 boinc_task_state.xml
[2025-07-27 19:23:42] -rw------- 1 boinc boinc      1044 Jul 27 19:22 memory_monitor_summary.json
[2025-07-27 19:23:42] -rw------- 1 boinc boinc   1593052 Jul 27 19:23 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:23:42] -rw------- 1 boinc boinc    302304 Jul 27 19:23 log.45743349._010356.job.log.tgz.1
[2025-07-27 19:23:42] -rw------- 1 boinc boinc      7788 Jul 27 19:23 heartbeat.json
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc      8192 Jul 27 19:23 boinc_mmap_file
[2025-07-27 19:23:42] -rw------- 1 boinc boinc        95 Jul 27 19:23 pilot_heartbeat.json
[2025-07-27 19:23:42] -rw------- 1 boinc boinc       894 Jul 27 19:23 pilotlog.txt
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc        27 Jul 27 19:23 wrapper_checkpoint.txt
[2025-07-27 19:23:42] -rw------- 1 boinc boinc   1027499 Jul 27 19:23 log.45743349._010356.job.log.1
[2025-07-27 19:23:42] -rw------- 1 boinc boinc       357 Jul 27 19:23 output.list
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc       620 Jul 27 19:23 runtime_log
[2025-07-27 19:23:42] -rw------- 1 boinc boinc   1351680 Jul 27 19:23 result.tar.gz
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc      9027 Jul 27 19:23 runtime_log.err
[2025-07-27 19:23:42] -rw------- 1 boinc boinc       665 Jul 27 19:23 4ZsMDmwbIz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLpNLDmCtXNXn.diag
[2025-07-27 19:23:42] -rw-r--r-- 1 boinc boinc     20887 Jul 27 19:23 stderr.txt
[2025-07-27 19:23:42] HITS file was successfully produced:
[2025-07-27 19:23:42] -rw------- 1 boinc boinc 205401528 Jul 27 19:22 shared/HITS.pool.root.1
[2025-07-27 19:23:42]  *** Contents of shared directory: ***
[2025-07-27 19:23:42] total 346104
[2025-07-27 19:23:42] -rw-r--r-- 2 boinc boinc 147086435 Jul 27 16:19 ATLAS.root_0
[2025-07-27 19:23:42] -rw-r--r-- 2 boinc boinc     15095 Jul 27 16:19 start_atlas.sh
[2025-07-27 19:23:42] -rw-r--r-- 2 boinc boinc    542878 Jul 27 16:19 input.tar.gz
[2025-07-27 19:23:42] -rw------- 1 boinc boinc 205401528 Jul 27 19:22 HITS.pool.root.1
[2025-07-27 19:23:42] -rw------- 1 boinc boinc   1351680 Jul 27 19:23 result.tar.gz
19:23:44 (2981692): run_atlas exited; CPU time 42563.919420
19:23:44 (2981692): called boinc_finish(0)

</stderr_txt>
]]>


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