Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:23:35 (3283869): wrapper (7.7.26015): starting
20:23:35 (3283869): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 20:23:35] Arguments: --nthreads 4
[2025-07-27 20:23:35] Threads: 4
[2025-07-27 20:23:35] Checking for CVMFS
[2025-07-27 20:23:35] No cvmfs_config command found, will try listing directly
[2025-07-27 20:23:35] CVMFS is ok
[2025-07-27 20:23:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:23:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:23:35] Further information can be found at the LHC@home message board.
[2025-07-27 20:23:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:23:35] Checking for apptainer binary...
[2025-07-27 20:23:35] which: no apptainer in ((null))
[2025-07-27 20:23:35] apptainer is not installed, using version from CVMFS
[2025-07-27 20:23:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:23:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-07-27 20:23:35] apptainer works
[2025-07-27 20:23:35] Set ATHENA_PROC_NUMBER=4
[2025-07-27 20:23:35] Set ATHENA_CORE_NUMBER=4
[2025-07-27 20:23:35] Starting ATLAS job with PandaID=6744941641
[2025-07-27 20:23:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:06:46 (3747398): wrapper (7.7.26015): starting
23:06:46 (3747398): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 23:06:46] Arguments: --nthreads 4
[2025-07-27 23:06:46] Threads: 4
[2025-07-27 23:06:46] This job has been restarted, cleaning up previous attempt
[2025-07-27 23:06:46] Checking for CVMFS
[2025-07-27 23:06:46] No cvmfs_config command found, will try listing directly
[2025-07-27 23:06:46] CVMFS is ok
[2025-07-27 23:06:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:06:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 23:06:46] Further information can be found at the LHC@home message board.
[2025-07-27 23:06:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:06:46] Checking for apptainer binary...
[2025-07-27 23:06:46] which: no apptainer in ((null))
[2025-07-27 23:06:46] apptainer is not installed, using version from CVMFS
[2025-07-27 23:06:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:06:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-07-27 23:06:46] apptainer works
[2025-07-27 23:06:46] Set ATHENA_PROC_NUMBER=4
[2025-07-27 23:06:46] Set ATHENA_CORE_NUMBER=4
[2025-07-27 23:06:46] Starting ATLAS job with PandaID=6744941641
[2025-07-27 23:06:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 02:19:30]  *** The last 200 lines of the pilot log: ***
[2025-07-28 02:19:30] 2025-07-28 00:18:58,993 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 02:19:30] 2025-07-28 00:18:58,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 02:19:30] 2025-07-28 00:18:58,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 02:19:30] 2025-07-28 00:18:58,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 02:19:30] 2025-07-28 00:18:58,997 | INFO     | fitting pss+swap vs Time
[2025-07-28 02:19:30] 2025-07-28 00:18:58,998 | INFO     | sum of square deviations: 2093397390.0
[2025-07-28 02:19:30] 2025-07-28 00:18:58,999 | INFO     | sum of deviations: 18178137311.0
[2025-07-28 02:19:30] 2025-07-28 00:18:58,999 | INFO     | mean x: 1753656175.0
[2025-07-28 02:19:30] 2025-07-28 00:18:58,999 | INFO     | mean y: 2299062.6243386245
[2025-07-28 02:19:30] 2025-07-28 00:18:58,999 | INFO     | -- intersect: -15225675758.454924
[2025-07-28 02:19:30] 2025-07-28 00:18:58,999 | INFO     | intersect: -15225675758.454924
[2025-07-28 02:19:30] 2025-07-28 00:18:58,999 | INFO     | chi2: 2.042625247980454
[2025-07-28 02:19:30] 2025-07-28 00:18:59,000 | INFO     | sum of square deviations: 1931608310.0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,001 | INFO     | sum of deviations: 28356108030.0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,001 | INFO     | mean x: 1753656022.5
[2025-07-28 02:19:30] 2025-07-28 00:18:59,001 | INFO     | mean y: 2308434.032608696
[2025-07-28 02:19:30] 2025-07-28 00:18:59,001 | INFO     | -- intersect: -25741450983.460327
[2025-07-28 02:19:30] 2025-07-28 00:18:59,001 | INFO     | intersect: -25741450983.460327
[2025-07-28 02:19:30] 2025-07-28 00:18:59,001 | INFO     | chi2: 1.3566851512793103
[2025-07-28 02:19:30] 2025-07-28 00:18:59,001 | INFO     | current chi2=1.3566851512793103 (change=33.58129923143432 %)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,002 | INFO     | sum of square deviations: 1778377530.0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,003 | INFO     | sum of deviations: 27422071027.999996
[2025-07-28 02:19:30] 2025-07-28 00:18:59,003 | INFO     | mean x: 1753655870.0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,003 | INFO     | mean y: 2307504.6648044693
[2025-07-28 02:19:30] 2025-07-28 00:18:59,003 | INFO     | -- intersect: -27038562622.50618
[2025-07-28 02:19:30] 2025-07-28 00:18:59,003 | INFO     | intersect: -27038562622.50618
[2025-07-28 02:19:30] 2025-07-28 00:18:59,003 | INFO     | chi2: 1.357376584510756
[2025-07-28 02:19:30] 2025-07-28 00:18:59,004 | INFO     | current chi2=1.357376584510756 (change=-0.05096490005758556 %)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,004 | INFO     | right removable region: 178
[2025-07-28 02:19:30] 2025-07-28 00:18:59,004 | INFO     | sum of square deviations: 1931608310.0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,005 | INFO     | sum of deviations: -6330304981.499999
[2025-07-28 02:19:30] 2025-07-28 00:18:59,005 | INFO     | mean x: 1753656327.5
[2025-07-28 02:19:30] 2025-07-28 00:18:59,005 | INFO     | mean y: 2321852.538043478
[2025-07-28 02:19:30] 2025-07-28 00:18:59,005 | INFO     | -- intersect: 5749439075.186688
[2025-07-28 02:19:30] 2025-07-28 00:18:59,005 | INFO     | intersect: 5749439075.186688
[2025-07-28 02:19:30] 2025-07-28 00:18:59,006 | INFO     | chi2: 0.7062356599658913
[2025-07-28 02:19:30] 2025-07-28 00:18:59,006 | INFO     | current chi2=0.7062356599658913 (change=65.42509886900952 %)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,006 | INFO     | sum of square deviations: 1778377530.0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,007 | INFO     | sum of deviations: -5433422011.999998
[2025-07-28 02:19:30] 2025-07-28 00:18:59,007 | INFO     | mean x: 1753656480.0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,007 | INFO     | mean y: 2320966.7318435754
[2025-07-28 02:19:30] 2025-07-28 00:18:59,007 | INFO     | -- intersect: 5360213517.206452
[2025-07-28 02:19:30] 2025-07-28 00:18:59,007 | INFO     | intersect: 5360213517.206452
[2025-07-28 02:19:30] 2025-07-28 00:18:59,008 | INFO     | chi2: 0.7044089390621044
[2025-07-28 02:19:30] 2025-07-28 00:18:59,008 | INFO     | current chi2=0.7044089390621044 (change=0.2586559993126241 %)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,008 | INFO     | left removable region: 20
[2025-07-28 02:19:30] 2025-07-28 00:18:59,008 | INFO     | sum of square deviations: 1223016419.5
[2025-07-28 02:19:30] 2025-07-28 00:18:59,009 | INFO     | sum of deviations: 3307675254.5
[2025-07-28 02:19:30] 2025-07-28 00:18:59,009 | INFO     | mean x: 1753656449.5
[2025-07-28 02:19:30] 2025-07-28 00:18:59,009 | INFO     | mean y: 2332601.069620253
[2025-07-28 02:19:30] 2025-07-28 00:18:59,009 | INFO     | -- intersect: -4740470480.247047
[2025-07-28 02:19:30] 2025-07-28 00:18:59,009 | INFO     | intersect: -4740470480.247047
[2025-07-28 02:19:30] 2025-07-28 00:18:59,009 | INFO     | chi2: 0.0002883857094909803
[2025-07-28 02:19:30] 2025-07-28 00:18:59,010 | INFO     | -- intersect: -4740470480.247047
[2025-07-28 02:19:30] 2025-07-28 00:18:59,010 | INFO     | current memory leak: 2.70 B/s (using 158 data points, chi2=0.00)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,010 | INFO     | could have reported an average CPU frequency of 2591 MHz (10 samples)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,010 | INFO     | ..............................
[2025-07-28 02:19:30] 2025-07-28 00:18:59,010 | INFO     | . Timing measurements:
[2025-07-28 02:19:30] 2025-07-28 00:18:59,010 | INFO     | . get job = 0 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,011 | INFO     | . initial setup = 0 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,011 | INFO     | . payload setup = 6 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,011 | INFO     | . stage-in = 0 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,011 | INFO     | . payload execution = 11490 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,011 | INFO     | . stage-out = 1 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,011 | INFO     | . log creation = 0 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,011 | INFO     | ..............................
[2025-07-28 02:19:30] 2025-07-28 00:18:59,107 | INFO     | 
[2025-07-28 02:19:30] 2025-07-28 00:18:59,107 | INFO     | job summary report
[2025-07-28 02:19:30] 2025-07-28 00:18:59,107 | INFO     | --------------------------------------------------
[2025-07-28 02:19:30] 2025-07-28 00:18:59,107 | INFO     | PanDA job id: 6744941641
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | task id: 45743349
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | errors: (none)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | pilot state: finished 
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | transexitcode: 0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | exeerrorcode: 0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | exeerrordiag: 
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | exitcode: 0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | exitmsg: OK
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | cpuconsumptiontime: 44632 s
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | nevents: 400
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | neventsw: 0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | pid: 3758075
[2025-07-28 02:19:30] 2025-07-28 00:18:59,108 | INFO     | pgrp: 3758075
[2025-07-28 02:19:30] 2025-07-28 00:18:59,109 | INFO     | corecount: 4
[2025-07-28 02:19:30] 2025-07-28 00:18:59,109 | INFO     | event service: False
[2025-07-28 02:19:30] 2025-07-28 00:18:59,109 | INFO     | sizes: {0: 2397257, 1: 2397512, 5: 2397774, 12: 2397830, 11500: 2427276, 11501: 2436296, 11503: 2436480, 11508: 2436674}
[2025-07-28 02:19:30] 2025-07-28 00:18:59,109 | INFO     | --------------------------------------------------
[2025-07-28 02:19:30] 2025-07-28 00:18:59,109 | INFO     | 
[2025-07-28 02:19:30] 2025-07-28 00:18:59,109 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-07-28 02:19:30] 2025-07-28 00:18:59,128 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | job 6744941641 has completed (purged errors)
[2025-07-28 02:19:30] 2025-07-28 00:18:59,130 | INFO     | overall cleanup function is called
[2025-07-28 02:19:30] 2025-07-28 00:19:00,138 | INFO     | --- collectZombieJob: --- 10, [3758075]
[2025-07-28 02:19:30] 2025-07-28 00:19:00,138 | INFO     | zombie collector waiting for pid 3758075
[2025-07-28 02:19:30] 2025-07-28 00:19:00,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 02:19:30] 2025-07-28 00:19:00,139 | INFO     | collected zombie processes
[2025-07-28 02:19:30] 2025-07-28 00:19:00,139 | INFO     | will attempt to kill all subprocesses of pid=3758075
[2025-07-28 02:19:30] 2025-07-28 00:19:00,456 | INFO     | process IDs to be killed: [3758075] (in reverse order)
[2025-07-28 02:19:30] 2025-07-28 00:19:00,557 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 02:19:30] 2025-07-28 00:19:00,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 02:19:30] 2025-07-28 00:19:00,566 | INFO     | did not find any defunct processes belonging to 3758075
[2025-07-28 02:19:30] 2025-07-28 00:19:00,575 | INFO     | did not find any defunct processes belonging to 3758075
[2025-07-28 02:19:30] 2025-07-28 00:19:00,576 | INFO     | ready for new job
[2025-07-28 02:19:30] 2025-07-28 00:19:00,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 02:19:30] 2025-07-28 00:19:00,578 | INFO     | ***************************************
[2025-07-28 02:19:30] 2025-07-28 00:19:00,578 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 02:19:30] 2025-07-28 00:19:00,578 | INFO     | ***************************************
[2025-07-28 02:19:30] 2025-07-28 00:19:00,578 | INFO     | 
[2025-07-28 02:19:30] 2025-07-28 00:19:00,582 | INFO     | architecture information:
[2025-07-28 02:19:30] 2025-07-28 00:19:00,582 | INFO     | executing command: cat /etc/os-release
[2025-07-28 02:19:30] 2025-07-28 00:19:00,596 | INFO     | cat /etc/os-release:
[2025-07-28 02:19:30] NAME="CentOS Linux"
[2025-07-28 02:19:30] VERSION="7 (Core)"
[2025-07-28 02:19:30] ID="centos"
[2025-07-28 02:19:30] ID_LIKE="rhel fedora"
[2025-07-28 02:19:30] VERSION_ID="7"
[2025-07-28 02:19:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 02:19:30] ANSI_COLOR="0;31"
[2025-07-28 02:19:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 02:19:30] HOME_URL="https://www.centos.org/"
[2025-07-28 02:19:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 02:19:30] 
[2025-07-28 02:19:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 02:19:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 02:19:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 02:19:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 02:19:30] 
[2025-07-28 02:19:30] 2025-07-28 00:19:00,596 | INFO     | ***************************************
[2025-07-28 02:19:30] 2025-07-28 00:19:01,099 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-07-28 02:19:30] 2025-07-28 00:19:01,114 | INFO     | sufficient remaining disk space (673372438528 B)
[2025-07-28 02:19:30] 2025-07-28 00:19:01,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 02:19:30] 2025-07-28 00:19:01,115 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 02:19:30] 2025-07-28 00:19:01,115 | INFO     | update_server=False
[2025-07-28 02:19:30] 2025-07-28 00:19:01,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 02:19:30] 2025-07-28 00:19:01,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 02:19:30] 2025-07-28 00:19:01,500 | INFO     | all data control threads have been joined
[2025-07-28 02:19:30] 2025-07-28 00:19:01,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:19:30] 2025-07-28 00:19:01,831 | INFO     | aborting loop
[2025-07-28 02:19:30] 2025-07-28 00:19:02,121 | INFO     | [job] retrieve thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:02,196 | INFO     | all payload control threads have been joined
[2025-07-28 02:19:30] 2025-07-28 00:19:02,206 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:02,216 | INFO     | [payload] failed_post thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:02,286 | INFO     | [data] copytool_in thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:02,296 | INFO     | all job control threads have been joined
[2025-07-28 02:19:30] 2025-07-28 00:19:02,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 02:19:30] 2025-07-28 00:19:02,503 | INFO     | [data] control thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:02,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:02,625 | INFO     | [job] validate thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:02,836 | INFO     | [job] job monitor thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:03,011 | INFO     | [payload] validate_post thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:03,058 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:03,096 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:03,201 | INFO     | [payload] control thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:03,301 | INFO     | [job] control thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:04,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 02:19:30] 2025-07-28 00:19:04,476 | INFO     | [data] copytool_out thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:05,117 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:05,119 | INFO     | [job] queue monitor thread has finished
[2025-07-28 02:19:30] 2025-07-28 00:19:06,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23370972178240)>', '<ExcThread(monitor, started 23370737350400)>']
[2025-07-28 02:19:30] 2025-07-28 00:19:11,902 | INFO     | all workflow threads have been joined
[2025-07-28 02:19:30] 2025-07-28 00:19:11,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 02:19:30] 2025-07-28 00:19:11,902 | INFO     | traces error code: 0
[2025-07-28 02:19:30] 2025-07-28 00:19:11,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 02:19:30] 2025-07-28 00:19:30,665 | INFO     | PID=3751075 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 02:19:30] 2025-07-28 00:19:30,666 | INFO     | .. there are 12 such processes running
[2025-07-28 02:19:30] 2025-07-28 00:19:30,666 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 02:19:30] 2025-07-28 00:19:30,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 02:19:30] 2025-07-28 00:19:30,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 02:19:30] 2025-07-28 00:19:30,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 02:19:30] 2025-07-28 00:19:30,666 | INFO     | [monitor] control thread has ended
[2025-07-28 02:19:30] 2025-07-28 00:19:30,810 [wrapper] ==== pilot stdout END ====
[2025-07-28 02:19:30] 2025-07-28 00:19:30,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 02:19:30] 2025-07-28 00:19:30,816 [wrapper] pilotpid: 3751075
[2025-07-28 02:19:30] 2025-07-28 00:19:30,818 [wrapper] Pilot exit status: 0
[2025-07-28 02:19:30] 2025-07-28 00:19:30,828 [wrapper] pandaids: 6744941641 6744941641
[2025-07-28 02:19:30] 2025-07-28 00:19:30,886 [wrapper] cleanup supervisor_pilot   27601 3751076
[2025-07-28 02:19:30] 2025-07-28 00:19:30,888 [wrapper] Test setup, not cleaning
[2025-07-28 02:19:30] 2025-07-28 00:19:30,891 [wrapper] apfmon messages muted
[2025-07-28 02:19:30] 2025-07-28 00:19:30,894 [wrapper] ==== wrapper stdout END ====
[2025-07-28 02:19:30] 2025-07-28 00:19:30,896 [wrapper] ==== wrapper stderr END ====
[2025-07-28 02:19:30]  *** Error codes and diagnostics ***
[2025-07-28 02:19:30]     "exeErrorCode": 0,
[2025-07-28 02:19:30]     "exeErrorDiag": "",
[2025-07-28 02:19:30]     "pilotErrorCode": 0,
[2025-07-28 02:19:30]     "pilotErrorDiag": "",
[2025-07-28 02:19:30]  *** Listing of results directory ***
[2025-07-28 02:19:30] total 496328
[2025-07-28 02:19:30] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc    530466 Jul 25 01:14 pilot3.tar.gz
[2025-07-28 02:19:30] -rwx------ 1 boinc boinc     36292 Jul 25 01:58 runpilot2-wrapper.sh
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc      5112 Jul 25 01:58 queuedata.json
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc       100 Jul 27 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 02:19:30] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 20:23 run_atlas
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc       105 Jul 27 20:23 job.xml
[2025-07-28 02:19:30] -rw-r--r-- 3 boinc boinc 146867512 Jul 27 20:23 EVNT.45743347._000702.pool.root.1
[2025-07-28 02:19:30] -rw-r--r-- 3 boinc boinc 146867512 Jul 27 20:23 ATLAS.root_0
[2025-07-28 02:19:30] -rw-r--r-- 2 boinc boinc    542882 Jul 27 20:23 input.tar.gz
[2025-07-28 02:19:30] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:23 start_atlas.sh
[2025-07-28 02:19:30] drwxrwx--x 2 boinc boinc      4096 Jul 27 20:23 shared
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc         0 Jul 27 20:23 boinc_lockfile
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc      6644 Jul 27 23:06 init_data.xml
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc      2562 Jul 27 23:06 pandaJob.out
[2025-07-28 02:19:30] -rw------- 1 boinc boinc    980109 Jul 27 23:06 agis_schedconf.cvmfs.json
[2025-07-28 02:19:30] -rw------- 1 boinc boinc 207804973 Jul 28 02:18 HITS.45743349._013006.pool.root.1
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc       530 Jul 28 02:18 boinc_task_state.xml
[2025-07-28 02:19:30] -rw------- 1 boinc boinc      1036 Jul 28 02:18 memory_monitor_summary.json
[2025-07-28 02:19:30] -rw------- 1 boinc boinc   1593052 Jul 28 02:18 agis_ddmendpoints.agis.ALL.json
[2025-07-28 02:19:30] -rw------- 1 boinc boinc    317171 Jul 28 02:18 log.45743349._013006.job.log.tgz.1
[2025-07-28 02:19:30] -rw------- 1 boinc boinc        96 Jul 28 02:18 pilot_heartbeat.json
[2025-07-28 02:19:30] -rw------- 1 boinc boinc      7829 Jul 28 02:18 heartbeat.json
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc      8192 Jul 28 02:19 boinc_mmap_file
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc        28 Jul 28 02:19 wrapper_checkpoint.txt
[2025-07-28 02:19:30] -rw------- 1 boinc boinc       823 Jul 28 02:19 pilotlog.txt
[2025-07-28 02:19:30] -rw------- 1 boinc boinc   1091313 Jul 28 02:19 log.45743349._013006.job.log.1
[2025-07-28 02:19:30] -rw------- 1 boinc boinc       357 Jul 28 02:19 output.list
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc       620 Jul 28 02:19 runtime_log
[2025-07-28 02:19:30] -rw------- 1 boinc boinc   1423360 Jul 28 02:19 result.tar.gz
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc      9104 Jul 28 02:19 runtime_log.err
[2025-07-28 02:19:30] -rw------- 1 boinc boinc       789 Jul 28 02:19 fRnLDm50Kz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKFOLDm9ofYmm.diag
[2025-07-28 02:19:30] -rw-r--r-- 1 boinc boinc     22607 Jul 28 02:19 stderr.txt
[2025-07-28 02:19:30] HITS file was successfully produced:
[2025-07-28 02:19:30] -rw------- 1 boinc boinc 207804973 Jul 28 02:18 shared/HITS.pool.root.1
[2025-07-28 02:19:30]  *** Contents of shared directory: ***
[2025-07-28 02:19:30] total 348312
[2025-07-28 02:19:30] -rw-r--r-- 3 boinc boinc 146867512 Jul 27 20:23 ATLAS.root_0
[2025-07-28 02:19:30] -rw-r--r-- 2 boinc boinc    542882 Jul 27 20:23 input.tar.gz
[2025-07-28 02:19:30] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:23 start_atlas.sh
[2025-07-28 02:19:30] -rw------- 1 boinc boinc 207804973 Jul 28 02:18 HITS.pool.root.1
[2025-07-28 02:19:30] -rw------- 1 boinc boinc   1423360 Jul 28 02:19 result.tar.gz
02:19:32 (3747398): run_atlas exited; CPU time 45013.754292
02:19:32 (3747398): called boinc_finish(0)

</stderr_txt>
]]>

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