Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:46:35 (2217951): wrapper (7.7.26015): starting
21:46:35 (2217951): wrapper: running run_atlas (--nthreads 3)
[2025-07-25 21:46:35] Arguments: --nthreads 3
[2025-07-25 21:46:35] Threads: 3
[2025-07-25 21:46:35] Checking for CVMFS
[2025-07-25 21:46:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 21:46:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 21:46:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 21:46:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 21:46:35] 2.9.2.0 842641 5507 79708 148751 2 57 32147880 36864001 0 130560 0 3644572 99.988 210912 2571 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-25 21:46:35] CVMFS is ok
[2025-07-25 21:46:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:46:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:46:35] Further information can be found at the LHC@home message board.
[2025-07-25 21:46:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:46:35] Checking for apptainer binary...
[2025-07-25 21:46:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 21:46:35] Running /usr/bin/apptainer --version
[2025-07-25 21:46:35] apptainer version 1.4.1-1.1
[2025-07-25 21:46:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:46:35] thA331b
[2025-07-25 21:46:35] apptainer works
[2025-07-25 21:46:35] Set ATHENA_PROC_NUMBER=3
[2025-07-25 21:46:35] Set ATHENA_CORE_NUMBER=3
[2025-07-25 21:46:35] Starting ATLAS job with PandaID=6744941690
[2025-07-25 21:46:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 23:12:02]  *** The last 200 lines of the pilot log: ***
[2025-07-25 23:12:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-25 23:12:02]  is_altstaged=None
[2025-07-25 23:12:02]  is_tar=False
[2025-07-25 23:12:02]  lfn=log.45743349._013055.job.log.tgz.1
[2025-07-25 23:12:02]  mtime=0
[2025-07-25 23:12:02]  protocol_id=None
[2025-07-25 23:12:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 23:12:02]  replicas=None
[2025-07-25 23:12:02]  scope=mc23_13p6TeV
[2025-07-25 23:12:02]  status=None
[2025-07-25 23:12:02]  status_code=0
[2025-07-25 23:12:02]  storage_token=
[2025-07-25 23:12:02]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744941690/log.45743349._013055.job.log.tgz.1
[2025-07-25 23:12:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/27/log.45743349._013055.job.log.tgz.1
[2025-07-25 23:12:02]  workdir=None
[2025-07-25 23:12:02] ]
[2025-07-25 23:12:02] 2025-07-25 21:11:36,054 | INFO     | transferring file log.45743349._013055.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744941690/log.45743349._013055.job.log.tgz.1 to /local/data/boinc/
[2025-07-25 23:12:02] 2025-07-25 21:11:36,054 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744941690/log.45743349._013055.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0130
[2025-07-25 23:12:02] 2025-07-25 21:11:36,066 | INFO     | adding to output.list: log.45743349._013055.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/27/log.45743349._013055.job.log.tg
[2025-07-25 23:12:02] 2025-07-25 21:11:36,067 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 23:12:02] 2025-07-25 21:11:36,067 | INFO     | summary of transferred files:
[2025-07-25 23:12:02] 2025-07-25 21:11:36,067 | INFO     |  -- lfn=log.45743349._013055.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 23:12:02] 2025-07-25 21:11:36,067 | INFO     | stage-out finished correctly
[2025-07-25 23:12:02] 2025-07-25 21:11:36,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 23:12:02] 2025-07-25 21:11:37,569 | INFO     | job 6744941690 has state=finished
[2025-07-25 23:12:02] 2025-07-25 21:11:37,570 | INFO     | preparing for final server update for job 6744941690 in state='finished'
[2025-07-25 23:12:02] 2025-07-25 21:11:37,570 | INFO     | this job has now completed (state=finished)
[2025-07-25 23:12:02] 2025-07-25 21:11:37,570 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 23:12:02] 2025-07-25 21:11:37,570 | INFO     | log transfer has been attempted: DONE
[2025-07-25 23:12:02] 2025-07-25 21:11:37,570 | INFO     | job 6744941690 has finished - writing final server update
[2025-07-25 23:12:02] 2025-07-25 21:11:37,570 | INFO     | total number of processed events: 400 (read)
[2025-07-25 23:12:02] 2025-07-25 21:11:37,571 | INFO     | executing command: lscpu
[2025-07-25 23:12:02] 2025-07-25 21:11:37,586 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 23:12:02] 2025-07-25 21:11:40,331 | WARNING  | process 2228082 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 23:12:02] 2025-07-25 21:11:40,332 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744941690/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:12:02] 2025-07-25 21:11:40,368 | INFO     | number of running child processes to parent process 2228082: 1
[2025-07-25 23:12:02] 2025-07-25 21:11:40,368 | INFO     | maximum number of monitored processes: 6
[2025-07-25 23:12:02] 2025-07-25 21:11:41,753 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 23:12:02] 2025-07-25 21:11:41,754 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3648.112083333333
[2025-07-25 23:12:02] 2025-07-25 21:11:41,754 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744941690/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 23:12:02] 2025-07-25 21:11:41,755 | INFO     | extracted standard info from prmon json
[2025-07-25 23:12:02] 2025-07-25 21:11:41,755 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 23:12:02] 2025-07-25 21:11:41,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 23:12:02] 2025-07-25 21:11:41,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 23:12:02] 2025-07-25 21:11:41,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 23:12:02] 2025-07-25 21:11:41,755 | INFO     | fitting pss+swap vs Time
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | sum of square deviations: 141539398.0
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | sum of deviations: -8585746340.0
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | mean x: 1753475443.0
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | mean y: 2433135.038961039
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | -- intersect: 106367837960.46523
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | intersect: 106367837960.46523
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | chi2: 0.07719774587971218
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | -- intersect: 106367837960.46523
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | current memory leak: -60.66 B/s (using 77 data points, chi2=0.08)
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | could have reported an average CPU frequency of 3913 MHz (6 samples)
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | ..............................
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . Timing measurements:
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . get job = 0 s
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . initial setup = 1 s
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . payload setup = 3 s
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . stage-in = 0 s
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . payload execution = 5075 s
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . stage-out = 0 s
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | . log creation = 0 s
[2025-07-25 23:12:02] 2025-07-25 21:11:41,756 | INFO     | ..............................
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | 
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | job summary report
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | --------------------------------------------------
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | PanDA job id: 6744941690
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | task id: 45743349
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | errors: (none)
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 23:12:02] 2025-07-25 21:11:42,246 | INFO     | pilot state: finished 
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | transexitcode: 0
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | exeerrorcode: 0
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | exeerrordiag: 
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | exitcode: 0
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | exitmsg: OK
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | cpuconsumptiontime: 14525 s
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | nevents: 400
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | neventsw: 0
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | pid: 2228082
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | pgrp: 2228082
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | corecount: 3
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | event service: False
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | sizes: {0: 2397473, 2: 2397735, 10: 2397763, 5082: 2424231, 5083: 2433291, 5088: 2433429}
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | --------------------------------------------------
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | 
[2025-07-25 23:12:02] 2025-07-25 21:11:42,247 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-25 23:12:02] 2025-07-25 21:11:42,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,262 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,262 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | job 6744941690 has completed (purged errors)
[2025-07-25 23:12:02] 2025-07-25 21:11:42,263 | INFO     | overall cleanup function is called
[2025-07-25 23:12:02] 2025-07-25 21:11:43,270 | INFO     | --- collectZombieJob: --- 10, [2228082]
[2025-07-25 23:12:02] 2025-07-25 21:11:43,270 | INFO     | zombie collector waiting for pid 2228082
[2025-07-25 23:12:02] 2025-07-25 21:11:43,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 23:12:02] 2025-07-25 21:11:43,270 | INFO     | collected zombie processes
[2025-07-25 23:12:02] 2025-07-25 21:11:43,270 | INFO     | will attempt to kill all subprocesses of pid=2228082
[2025-07-25 23:12:02] 2025-07-25 21:11:43,310 | INFO     | process IDs to be killed: [2228082] (in reverse order)
[2025-07-25 23:12:02] 2025-07-25 21:11:43,332 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 23:12:02] 2025-07-25 21:11:43,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 23:12:02] 2025-07-25 21:11:43,334 | INFO     | did not find any defunct processes belonging to 2228082
[2025-07-25 23:12:02] 2025-07-25 21:11:43,334 | INFO     | did not find any defunct processes belonging to 2228082
[2025-07-25 23:12:02] 2025-07-25 21:11:43,335 | INFO     | ready for new job
[2025-07-25 23:12:02] 2025-07-25 21:11:43,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 23:12:02] 2025-07-25 21:11:43,335 | INFO     | ***************************************
[2025-07-25 23:12:02] 2025-07-25 21:11:43,335 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 23:12:02] 2025-07-25 21:11:43,335 | INFO     | ***************************************
[2025-07-25 23:12:02] 2025-07-25 21:11:43,335 | INFO     | 
[2025-07-25 23:12:02] 2025-07-25 21:11:43,336 | INFO     | architecture information:
[2025-07-25 23:12:02] 2025-07-25 21:11:43,336 | INFO     | executing command: cat /etc/os-release
[2025-07-25 23:12:02] 2025-07-25 21:11:43,344 | INFO     | cat /etc/os-release:
[2025-07-25 23:12:02] NAME="CentOS Linux"
[2025-07-25 23:12:02] VERSION="7 (Core)"
[2025-07-25 23:12:02] ID="centos"
[2025-07-25 23:12:02] ID_LIKE="rhel fedora"
[2025-07-25 23:12:02] VERSION_ID="7"
[2025-07-25 23:12:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 23:12:02] ANSI_COLOR="0;31"
[2025-07-25 23:12:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 23:12:02] HOME_URL="https://www.centos.org/"
[2025-07-25 23:12:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 23:12:02] 
[2025-07-25 23:12:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 23:12:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 23:12:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 23:12:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 23:12:02] 
[2025-07-25 23:12:02] 2025-07-25 21:11:43,344 | INFO     | ***************************************
[2025-07-25 23:12:02] 2025-07-25 21:11:43,847 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | INFO     | sufficient remaining disk space (227639558144 B)
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | INFO     | update_server=False
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 23:12:02] 2025-07-25 21:11:43,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 23:12:02] 2025-07-25 21:11:43,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:12:02] 2025-07-25 21:11:43,876 | INFO     | aborting loop
[2025-07-25 23:12:02] 2025-07-25 21:11:44,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 23:12:02] 2025-07-25 21:11:44,584 | INFO     | all payload control threads have been joined
[2025-07-25 23:12:02] 2025-07-25 21:11:44,785 | INFO     | all data control threads have been joined
[2025-07-25 23:12:02] 2025-07-25 21:11:44,866 | INFO     | [job] retrieve thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:44,880 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:44,881 | INFO     | [job] job monitor thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:45,272 | INFO     | all job control threads have been joined
[2025-07-25 23:12:02] 2025-07-25 21:11:45,589 | INFO     | [payload] control thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:45,629 | INFO     | [data] copytool_in thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:45,655 | INFO     | [payload] failed_post thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:45,780 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:45,790 | INFO     | [data] control thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:46,113 | INFO     | [data] copytool_out thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:46,257 | INFO     | [job] validate thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:46,278 | INFO     | [job] control thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:46,356 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:46,407 | INFO     | [payload] validate_post thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:46,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 23:12:02] 2025-07-25 21:11:46,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:12:02] 2025-07-25 21:11:47,803 | INFO     | [job] queue monitor thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:50,639 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:54,614 | INFO     | job.realtimelogging is not enabled
[2025-07-25 23:12:02] 2025-07-25 21:11:55,620 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 23:12:02] 2025-07-25 21:11:56,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801280403264)>', '<ExcThread(monitor, started 139800998807296)>']
[2025-07-25 23:12:02] 2025-07-25 21:11:57,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 23:12:02] 2025-07-25 21:11:57,928 | INFO     | [monitor] control thread has ended
[2025-07-25 23:12:02] 2025-07-25 21:12:02,008 | INFO     | all workflow threads have been joined
[2025-07-25 23:12:02] 2025-07-25 21:12:02,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 23:12:02] 2025-07-25 21:12:02,009 | INFO     | traces error code: 0
[2025-07-25 23:12:02] 2025-07-25 21:12:02,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 23:12:02] 2025-07-25 21:12:02,059 [wrapper] ==== pilot stdout END ====
[2025-07-25 23:12:02] 2025-07-25 21:12:02,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 23:12:02] 2025-07-25 21:12:02,064 [wrapper] pilotpid: 2221588
[2025-07-25 23:12:02] 2025-07-25 21:12:02,066 [wrapper] Pilot exit status: 0
[2025-07-25 23:12:02] 2025-07-25 21:12:02,073 [wrapper] pandaids: 6744941690
[2025-07-25 23:12:02] 2025-07-25 21:12:02,087 [wrapper] cleanup supervisor_pilot 2240111 2221589
[2025-07-25 23:12:02] 2025-07-25 21:12:02,090 [wrapper] Test setup, not cleaning
[2025-07-25 23:12:02] 2025-07-25 21:12:02,092 [wrapper] apfmon messages muted
[2025-07-25 23:12:02] 2025-07-25 21:12:02,094 [wrapper] ==== wrapper stdout END ====
[2025-07-25 23:12:02] 2025-07-25 21:12:02,096 [wrapper] ==== wrapper stderr END ====
[2025-07-25 23:12:02]  *** Error codes and diagnostics ***
[2025-07-25 23:12:02]     "exeErrorCode": 0,
[2025-07-25 23:12:02]     "exeErrorDiag": "",
[2025-07-25 23:12:02]     "pilotErrorCode": 0,
[2025-07-25 23:12:02]     "pilotErrorDiag": "",
[2025-07-25 23:12:02]  *** Listing of results directory ***
[2025-07-25 23:12:02] total 344872
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc    530466 Jul 25 01:14 pilot3.tar.gz
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc      5112 Jul 25 02:04 queuedata.json
[2025-07-25 23:12:02] -rwx------ 1 boinc boinc     36292 Jul 25 02:04 runpilot2-wrapper.sh
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc       100 Jul 25 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 23:12:02] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 21:46 run_atlas
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc       105 Jul 25 21:46 job.xml
[2025-07-25 23:12:02] -rw-r--r-- 2 boinc boinc 146303869 Jul 25 21:46 EVNT.45743347._000706.pool.root.1
[2025-07-25 23:12:02] -rw-r--r-- 2 boinc boinc    542884 Jul 25 21:46 input.tar.gz
[2025-07-25 23:12:02] -rw-r--r-- 2 boinc boinc     15095 Jul 25 21:46 start_atlas.sh
[2025-07-25 23:12:02] drwxrwx--x 2 boinc boinc      4096 Jul 25 21:46 shared
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc         0 Jul 25 21:46 boinc_setup_complete
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc      6442 Jul 25 21:46 init_data.xml
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc         0 Jul 25 21:46 boinc_lockfile
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc      2560 Jul 25 21:46 pandaJob.out
[2025-07-25 23:12:02] -rw------- 1 boinc boinc    979993 Jul 25 21:46 agis_schedconf.cvmfs.json
[2025-07-25 23:12:02] -rw------- 1 boinc boinc   1593052 Jul 25 21:46 agis_ddmendpoints.agis.ALL.json
[2025-07-25 23:12:02] drwx------ 4 boinc boinc      4096 Jul 25 21:46 pilot3
[2025-07-25 23:12:02] -rw------- 1 boinc boinc        95 Jul 25 23:11 pilot_heartbeat.json
[2025-07-25 23:12:02] -rw------- 1 boinc boinc 201533361 Jul 25 23:11 HITS.45743349._013055.pool.root.1
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc       529 Jul 25 23:11 boinc_task_state.xml
[2025-07-25 23:12:02] -rw------- 1 boinc boinc      1021 Jul 25 23:11 memory_monitor_summary.json
[2025-07-25 23:12:02] -rw------- 1 boinc boinc    218551 Jul 25 23:11 log.45743349._013055.job.log.tgz.1
[2025-07-25 23:12:02] -rw------- 1 boinc boinc      7759 Jul 25 23:11 heartbeat.json
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc      8192 Jul 25 23:11 boinc_mmap_file
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc        27 Jul 25 23:11 wrapper_checkpoint.txt
[2025-07-25 23:12:02] -rw------- 1 boinc boinc      4556 Jul 25 23:12 pilotlog.txt
[2025-07-25 23:12:02] -rw------- 1 boinc boinc    494897 Jul 25 23:12 log.45743349._013055.job.log.1
[2025-07-25 23:12:02] -rw------- 1 boinc boinc       357 Jul 25 23:12 output.list
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc       620 Jul 25 23:12 runtime_log
[2025-07-25 23:12:02] -rw------- 1 boinc boinc    737280 Jul 25 23:12 result.tar.gz
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc      8739 Jul 25 23:12 runtime_log.err
[2025-07-25 23:12:02] -rw------- 1 boinc boinc       659 Jul 25 23:12 G3HODmv6Kz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpFOLDm05Ugqm.diag
[2025-07-25 23:12:02] -rw-r--r-- 1 boinc boinc     21347 Jul 25 23:12 stderr.txt
[2025-07-25 23:12:02] HITS file was successfully produced:
[2025-07-25 23:12:02] -rw------- 1 boinc boinc 201533361 Jul 25 23:11 shared/HITS.pool.root.1
[2025-07-25 23:12:02]  *** Contents of shared directory: ***
[2025-07-25 23:12:02] total 340964
[2025-07-25 23:12:02] -rw-r--r-- 2 boinc boinc 146303869 Jul 25 21:46 ATLAS.root_0
[2025-07-25 23:12:02] -rw-r--r-- 2 boinc boinc    542884 Jul 25 21:46 input.tar.gz
[2025-07-25 23:12:02] -rw-r--r-- 2 boinc boinc     15095 Jul 25 21:46 start_atlas.sh
[2025-07-25 23:12:02] -rw------- 1 boinc boinc 201533361 Jul 25 23:11 HITS.pool.root.1
[2025-07-25 23:12:02] -rw------- 1 boinc boinc    737280 Jul 25 23:12 result.tar.gz
23:12:03 (2217951): run_atlas exited; CPU time 14541.272541
23:12:03 (2217951): called boinc_finish(0)

</stderr_txt>
]]>

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