Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:57:25 (3935966): wrapper (7.7.26015): starting
07:57:25 (3935966): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 07:57:25] Arguments: --nthreads 12
[2025-07-29 07:57:25] Threads: 12
[2025-07-29 07:57:25] Checking for CVMFS
[2025-07-29 07:57:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 07:57:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 07:57:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 07:57:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 07:57:29] 2.13.0.0 1164766 10270 92120 148879 1 188 3767393 4096001 13159 130560 0 112989268 99.999 378440 218 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 07:57:29] CVMFS is ok
[2025-07-29 07:57:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 07:57:29] Checking for apptainer binary...
[2025-07-29 07:57:29] apptainer is not installed, using version from CVMFS
[2025-07-29 07:57:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 07:58:09] epyc7v12
[2025-07-29 07:58:09] apptainer works
[2025-07-29 07:58:09] Set ATHENA_PROC_NUMBER=12
[2025-07-29 07:58:09] Set ATHENA_CORE_NUMBER=12
[2025-07-29 07:58:09] Starting ATLAS job with PandaID=6744941629
[2025-07-29 07:58:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31426/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 10:44:11]  *** The last 200 lines of the pilot log: ***
[2025-07-29 10:44:11] 2025-07-29 10:43:32,235 | INFO     | -- intersect: -185146209960.12946
[2025-07-29 10:44:11] 2025-07-29 10:43:32,235 | INFO     | intersect: -185146209960.12946
[2025-07-29 10:44:11] 2025-07-29 10:43:32,236 | INFO     | chi2: 9.959234277973572
[2025-07-29 10:44:11] 2025-07-29 10:43:32,236 | INFO     | sum of square deviations: 832745543.1222993
[2025-07-29 10:44:11] 2025-07-29 10:43:32,237 | INFO     | sum of deviations: 103968438115.17989
[2025-07-29 10:44:11] 2025-07-29 10:43:32,237 | INFO     | mean x: 1753781101.143885
[2025-07-29 10:44:11] 2025-07-29 10:43:32,237 | INFO     | mean y: 2482041.7410071944
[2025-07-29 10:44:11] 2025-07-29 10:43:32,237 | INFO     | -- intersect: -218957419200.3499
[2025-07-29 10:44:11] 2025-07-29 10:43:32,237 | INFO     | intersect: -218957419200.3499
[2025-07-29 10:44:11] 2025-07-29 10:43:32,238 | INFO     | chi2: 9.28516881814745
[2025-07-29 10:44:11] 2025-07-29 10:43:32,238 | INFO     | current chi2=9.28516881814745 (change=6.768245841117762 %)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,238 | INFO     | right removable region: 138
[2025-07-29 10:44:11] 2025-07-29 10:43:32,238 | INFO     | sum of square deviations: 832733343.1222993
[2025-07-29 10:44:11] 2025-07-29 10:43:32,243 | INFO     | sum of deviations: 45325106758.942444
[2025-07-29 10:44:11] 2025-07-29 10:43:32,244 | INFO     | mean x: 1753781406.143885
[2025-07-29 10:44:11] 2025-07-29 10:43:32,244 | INFO     | mean y: 2558123.4028776977
[2025-07-29 10:44:11] 2025-07-29 10:43:32,244 | INFO     | -- intersect: -95454565242.49246
[2025-07-29 10:44:11] 2025-07-29 10:43:32,244 | INFO     | intersect: -95454565242.49246
[2025-07-29 10:44:11] 2025-07-29 10:43:32,244 | INFO     | chi2: 4.253926719247773
[2025-07-29 10:44:11] 2025-07-29 10:43:32,245 | INFO     | current chi2=4.253926719247773 (change=57.28660858339273 %)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,245 | INFO     | sum of square deviations: 746055850.514925
[2025-07-29 10:44:11] 2025-07-29 10:43:32,246 | INFO     | sum of deviations: 4422165013.082088
[2025-07-29 10:44:11] 2025-07-29 10:43:32,246 | INFO     | mean x: 1753781558.6492538
[2025-07-29 10:44:11] 2025-07-29 10:43:32,246 | INFO     | mean y: 2629954.3208955224
[2025-07-29 10:44:11] 2025-07-29 10:43:32,246 | INFO     | -- intersect: -10392719728.808695
[2025-07-29 10:44:11] 2025-07-29 10:43:32,246 | INFO     | intersect: -10392719728.808695
[2025-07-29 10:44:11] 2025-07-29 10:43:32,246 | INFO     | chi2: 1.1959421815738325
[2025-07-29 10:44:11] 2025-07-29 10:43:32,247 | INFO     | current chi2=1.1959421815738325 (change=71.88615929459846 %)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,247 | INFO     | sum of square deviations: 665611032.8992264
[2025-07-29 10:44:11] 2025-07-29 10:43:32,248 | INFO     | sum of deviations: -8867317490.23256
[2025-07-29 10:44:11] 2025-07-29 10:43:32,248 | INFO     | mean x: 1753781711.1550388
[2025-07-29 10:44:11] 2025-07-29 10:43:32,248 | INFO     | mean y: 2655023.511627907
[2025-07-29 10:44:11] 2025-07-29 10:43:32,248 | INFO     | -- intersect: 23366659633.888237
[2025-07-29 10:44:11] 2025-07-29 10:43:32,248 | INFO     | intersect: 23366659633.888237
[2025-07-29 10:44:11] 2025-07-29 10:43:32,249 | INFO     | chi2: 0.8663724344009904
[2025-07-29 10:44:11] 2025-07-29 10:43:32,249 | INFO     | current chi2=0.8663724344009904 (change=27.557331136120293 %)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,249 | INFO     | sum of square deviations: 591166327.774191
[2025-07-29 10:44:11] 2025-07-29 10:43:32,250 | INFO     | sum of deviations: -12547253043.048386
[2025-07-29 10:44:11] 2025-07-29 10:43:32,250 | INFO     | mean x: 1753781863.6612904
[2025-07-29 10:44:11] 2025-07-29 10:43:32,250 | INFO     | mean y: 2662397.9274193547
[2025-07-29 10:44:11] 2025-07-29 10:43:32,250 | INFO     | -- intersect: 37225934075.99997
[2025-07-29 10:44:11] 2025-07-29 10:43:32,250 | INFO     | intersect: 37225934075.99997
[2025-07-29 10:44:11] 2025-07-29 10:43:32,251 | INFO     | chi2: 0.8031026246587122
[2025-07-29 10:44:11] 2025-07-29 10:43:32,251 | INFO     | current chi2=0.8031026246587122 (change=7.302841968422388 %)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,251 | INFO     | left removable region: 40
[2025-07-29 10:44:11] 2025-07-29 10:43:32,251 | INFO     | sum of square deviations: 291823921.88775456
[2025-07-29 10:44:11] 2025-07-29 10:43:32,252 | INFO     | sum of deviations: -1277771163.540816
[2025-07-29 10:44:11] 2025-07-29 10:43:32,252 | INFO     | mean x: 1753782290.6632652
[2025-07-29 10:44:11] 2025-07-29 10:43:32,252 | INFO     | mean y: 2675379.3775510206
[2025-07-29 10:44:11] 2025-07-29 10:43:32,252 | INFO     | -- intersect: 7681732064.113689
[2025-07-29 10:44:11] 2025-07-29 10:43:32,252 | INFO     | intersect: 7681732064.113689
[2025-07-29 10:44:11] 2025-07-29 10:43:32,252 | INFO     | chi2: 0.002094791411866104
[2025-07-29 10:44:11] 2025-07-29 10:43:32,252 | INFO     | -- intersect: 7681732064.113689
[2025-07-29 10:44:11] 2025-07-29 10:43:32,253 | INFO     | current memory leak: -4.38 B/s (using 98 data points, chi2=0.00)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | could have reported an average CPU frequency of 2402 MHz (8 samples)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | ..............................
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | . Timing measurements:
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | . get job = 0 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | . initial setup = 10 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | . payload setup = 242 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | . stage-in = 0 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,254 | INFO     | . payload execution = 8952 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,255 | INFO     | . stage-out = 5 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,255 | INFO     | . log creation = 2 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,255 | INFO     | ..............................
[2025-07-29 10:44:11] 2025-07-29 10:43:32,483 | INFO     | 
[2025-07-29 10:44:11] 2025-07-29 10:43:32,483 | INFO     | job summary report
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | --------------------------------------------------
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | PanDA job id: 6744941629
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | task id: 45743349
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | errors: (none)
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | pilot state: finished 
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | transexitcode: 0
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | exeerrorcode: 0
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | exeerrordiag: 
[2025-07-29 10:44:11] 2025-07-29 10:43:32,484 | INFO     | exitcode: 0
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | exitmsg: OK
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | cpuconsumptiontime: 54633 s
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | nevents: 400
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | neventsw: 0
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | pid: 4030223
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | pgrp: 4030223
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | corecount: 12
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | event service: False
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | sizes: {0: 2391701, 1: 2391785, 2: 2391984, 13: 2391984, 23: 2392040, 34: 2392068, 45: 2392224, 56: 2392252, 67: 2392280, 78: 2392308, 88: 2392364, 99: 2392672, 11
[2025-07-29 10:44:11] 2025-07-29 10:43:32,485 | INFO     | --------------------------------------------------
[2025-07-29 10:44:11] 2025-07-29 10:43:32,486 | INFO     | 
[2025-07-29 10:44:11] 2025-07-29 10:43:32,486 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31426/slots/1
[2025-07-29 10:44:11] 2025-07-29 10:43:33,476 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,477 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,477 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,477 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 10:44:11] 2025-07-29 10:43:33,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 10:44:11] 2025-07-29 10:43:33,479 | INFO     | job 6744941629 has completed (purged errors)
[2025-07-29 10:44:11] 2025-07-29 10:43:33,479 | INFO     | overall cleanup function is called
[2025-07-29 10:44:11] 2025-07-29 10:43:34,499 | INFO     | --- collectZombieJob: --- 10, [4030223]
[2025-07-29 10:44:11] 2025-07-29 10:43:34,499 | INFO     | zombie collector waiting for pid 4030223
[2025-07-29 10:44:11] 2025-07-29 10:43:34,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 10:44:11] 2025-07-29 10:43:34,499 | INFO     | collected zombie processes
[2025-07-29 10:44:11] 2025-07-29 10:43:34,499 | INFO     | will attempt to kill all subprocesses of pid=4030223
[2025-07-29 10:44:11] 2025-07-29 10:43:35,784 | INFO     | process IDs to be killed: [4030223] (in reverse order)
[2025-07-29 10:44:11] 2025-07-29 10:43:45,028 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 10:44:11] 2025-07-29 10:43:45,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 10:44:11] 2025-07-29 10:43:45,068 | INFO     | did not find any defunct processes belonging to 4030223
[2025-07-29 10:44:11] 2025-07-29 10:43:45,120 | INFO     | did not find any defunct processes belonging to 4030223
[2025-07-29 10:44:11] 2025-07-29 10:43:45,121 | INFO     | ready for new job
[2025-07-29 10:44:11] 2025-07-29 10:43:45,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 10:44:11] 2025-07-29 10:43:45,131 | INFO     | ***************************************
[2025-07-29 10:44:11] 2025-07-29 10:43:45,131 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 10:44:11] 2025-07-29 10:43:45,132 | INFO     | ***************************************
[2025-07-29 10:44:11] 2025-07-29 10:43:45,132 | INFO     | 
[2025-07-29 10:44:11] 2025-07-29 10:43:45,185 | INFO     | architecture information:
[2025-07-29 10:44:11] 2025-07-29 10:43:45,199 | INFO     | executing command: cat /etc/os-release
[2025-07-29 10:44:11] 2025-07-29 10:43:45,723 | INFO     | cat /etc/os-release:
[2025-07-29 10:44:11] NAME="CentOS Linux"
[2025-07-29 10:44:11] VERSION="7 (Core)"
[2025-07-29 10:44:11] ID="centos"
[2025-07-29 10:44:11] ID_LIKE="rhel fedora"
[2025-07-29 10:44:11] VERSION_ID="7"
[2025-07-29 10:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 10:44:11] ANSI_COLOR="0;31"
[2025-07-29 10:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 10:44:11] HOME_URL="https://www.centos.org/"
[2025-07-29 10:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 10:44:11] 
[2025-07-29 10:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 10:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 10:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 10:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 10:44:11] 
[2025-07-29 10:44:11] 2025-07-29 10:43:45,724 | INFO     | ***************************************
[2025-07-29 10:44:11] 2025-07-29 10:43:46,227 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31426/slots/1
[2025-07-29 10:44:11] 2025-07-29 10:43:46,717 | INFO     | sufficient remaining disk space (277863202816 B)
[2025-07-29 10:44:11] 2025-07-29 10:43:46,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 10:44:11] 2025-07-29 10:43:46,718 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 10:44:11] 2025-07-29 10:43:46,718 | INFO     | update_server=False
[2025-07-29 10:44:11] 2025-07-29 10:43:46,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 10:44:11] 2025-07-29 10:43:46,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 10:44:11] 2025-07-29 10:43:46,719 | INFO     | aborting loop
[2025-07-29 10:44:11] 2025-07-29 10:43:46,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 10:44:11] 2025-07-29 10:43:47,111 | INFO     | all payload control threads have been joined
[2025-07-29 10:44:11] 2025-07-29 10:43:47,223 | INFO     | all data control threads have been joined
[2025-07-29 10:44:11] 2025-07-29 10:43:47,723 | INFO     | [job] retrieve thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:47,727 | INFO     | [job] job monitor thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:47,755 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,119 | INFO     | [payload] control thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,235 | INFO     | [data] control thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,291 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,359 | INFO     | all job control threads have been joined
[2025-07-29 10:44:11] 2025-07-29 10:43:48,575 | INFO     | [payload] failed_post thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,731 | INFO     | [data] copytool_out thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,803 | INFO     | [job] validate thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,839 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:48,923 | INFO     | [data] copytool_in thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:49,207 | INFO     | [payload] validate_post thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:49,367 | INFO     | [job] control thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:49,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 10:44:11] 2025-07-29 10:43:49,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 10:44:11] 2025-07-29 10:43:50,559 | INFO     | [job] queue monitor thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:53,687 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 10:44:11] 2025-07-29 10:43:54,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140030218032960)>', '<ExcThread(monitor, started 140029909243648)>']
[2025-07-29 10:44:11] 2025-07-29 10:43:59,175 | INFO     | all workflow threads have been joined
[2025-07-29 10:44:11] 2025-07-29 10:43:59,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 10:44:11] 2025-07-29 10:43:59,175 | INFO     | traces error code: 0
[2025-07-29 10:44:11] 2025-07-29 10:43:59,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 10:44:11] 2025-07-29 10:44:06,332 | INFO     | PID=3970546 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 10:44:11] 2025-07-29 10:44:06,333 | INFO     | .. there are 19 such processes running
[2025-07-29 10:44:11] 2025-07-29 10:44:06,334 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 10:44:11] 2025-07-29 10:44:06,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 10:44:11] 2025-07-29 10:44:06,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 10:44:11] 2025-07-29 10:44:06,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 10:44:11] 2025-07-29 10:44:06,334 | CRITICAL | thread 'MainThread' is not alive
[2025-07-29 10:44:11] 2025-07-29 10:44:06,334 | INFO     | [monitor] control thread has ended
[2025-07-29 10:44:11] 2025-07-29 10:44:07,259 [wrapper] ==== pilot stdout END ====
[2025-07-29 10:44:11] 2025-07-29 10:44:07,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 10:44:11] 2025-07-29 10:44:07,463 [wrapper] pilotpid: 3970546
[2025-07-29 10:44:11] 2025-07-29 10:44:07,559 [wrapper] Pilot exit status: 0
[2025-07-29 10:44:11] 2025-07-29 10:44:08,131 [wrapper] pandaids: 6744941629
[2025-07-29 10:44:11] 2025-07-29 10:44:08,979 [wrapper] cleanup supervisor_pilot  308958 3970547
[2025-07-29 10:44:11] 2025-07-29 10:44:09,071 [wrapper] Test setup, not cleaning
[2025-07-29 10:44:11] 2025-07-29 10:44:09,163 [wrapper] apfmon messages muted
[2025-07-29 10:44:11] 2025-07-29 10:44:09,279 [wrapper] ==== wrapper stdout END ====
[2025-07-29 10:44:11] 2025-07-29 10:44:09,305 [wrapper] ==== wrapper stderr END ====
[2025-07-29 10:44:11]  *** Error codes and diagnostics ***
[2025-07-29 10:44:11]     "exeErrorCode": 0,
[2025-07-29 10:44:11]     "exeErrorDiag": "",
[2025-07-29 10:44:11]     "pilotErrorCode": 0,
[2025-07-29 10:44:11]     "pilotErrorDiag": "",
[2025-07-29 10:44:11]  *** Listing of results directory ***
[2025-07-29 10:44:11] total 353400
[2025-07-29 10:44:11] -rw-r--r-- 1 boinc boinc    530466 Jul 24 23:14 pilot3.tar.gz
[2025-07-29 10:44:11] -rwx------ 1 boinc boinc     36292 Jul 24 23:58 runpilot2-wrapper.sh
[2025-07-29 10:44:11] -rw-r--r-- 1 boinc boinc      5112 Jul 24 23:58 queuedata.json
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc       100 Jul 29 07:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 10:44:11] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 07:57 run_atlas
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc       105 Jul 29 07:57 job.xml
[2025-07-29 10:44:11] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:57 start_atlas.sh
[2025-07-29 10:44:11] drwxrwx--x 2 boinc boinc      4096 Jul 29 07:57 shared
[2025-07-29 10:44:11] -rw-r--r-- 2 boinc boinc    542884 Jul 29 07:57 input.tar.gz
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc      6568 Jul 29 07:57 init_data.xml
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc         0 Jul 29 07:57 boinc_setup_complete
[2025-07-29 10:44:11] -rw-r--r-- 2 boinc boinc 146867512 Jul 29 07:57 EVNT.45743347._000702.pool.root.1
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc         0 Jul 29 07:57 boinc_lockfile
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc      2561 Jul 29 07:58 pandaJob.out
[2025-07-29 10:44:11] -rw------- 1 boinc boinc    977316 Jul 29 08:02 agis_schedconf.cvmfs.json
[2025-07-29 10:44:11] -rw------- 1 boinc boinc   1589827 Jul 29 08:02 agis_ddmendpoints.agis.ALL.json
[2025-07-29 10:44:11] drwx------ 4 boinc boinc      4096 Jul 29 08:02 pilot3
[2025-07-29 10:44:11] -rw------- 1 boinc boinc 208701474 Jul 29 10:39 HITS.45743349._012994.pool.root.1
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc       530 Jul 29 10:39 boinc_task_state.xml
[2025-07-29 10:44:11] -rw------- 1 boinc boinc      1022 Jul 29 10:40 memory_monitor_summary.json
[2025-07-29 10:44:11] -rw------- 1 boinc boinc    388517 Jul 29 10:41 log.45743349._012994.job.log.tgz.1
[2025-07-29 10:44:11] -rw------- 1 boinc boinc      7736 Jul 29 10:43 heartbeat.json
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc        27 Jul 29 10:44 wrapper_checkpoint.txt
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 10:44 boinc_mmap_file
[2025-07-29 10:44:11] -rw------- 1 boinc boinc       893 Jul 29 10:44 pilotlog.txt
[2025-07-29 10:44:11] -rw------- 1 boinc boinc        95 Jul 29 10:44 pilot_heartbeat.json
[2025-07-29 10:44:11] -rw------- 1 boinc boinc    830787 Jul 29 10:44 log.45743349._012994.job.log.1
[2025-07-29 10:44:11] -rw------- 1 boinc boinc       357 Jul 29 10:44 output.list
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc       620 Jul 29 10:44 runtime_log
[2025-07-29 10:44:11] -rw------- 1 boinc boinc   1239040 Jul 29 10:44 result.tar.gz
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc      8964 Jul 29 10:44 runtime_log.err
[2025-07-29 10:44:11] -rw------- 1 boinc boinc       652 Jul 29 10:44 QoZLDm50Kz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8EOLDmGl0QHn.diag
[2025-07-29 10:44:11] -rw-rw-r-- 1 boinc boinc     20793 Jul 29 10:44 stderr.txt
[2025-07-29 10:44:12] HITS file was successfully produced:
[2025-07-29 10:44:12] -rw------- 1 boinc boinc 208701474 Jul 29 10:39 shared/HITS.pool.root.1
[2025-07-29 10:44:12]  *** Contents of shared directory: ***
[2025-07-29 10:44:12] total 349008
[2025-07-29 10:44:12] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:57 start_atlas.sh
[2025-07-29 10:44:12] -rw-r--r-- 2 boinc boinc    542884 Jul 29 07:57 input.tar.gz
[2025-07-29 10:44:12] -rw-r--r-- 2 boinc boinc 146867512 Jul 29 07:57 ATLAS.root_0
[2025-07-29 10:44:12] -rw------- 1 boinc boinc 208701474 Jul 29 10:39 HITS.pool.root.1
[2025-07-29 10:44:12] -rw------- 1 boinc boinc   1239040 Jul 29 10:44 result.tar.gz
10:44:13 (3935966): run_atlas exited; CPU time 55110.455970
10:44:13 (3935966): called boinc_finish(0)

</stderr_txt>
]]>

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