Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:56:46 (2581015): wrapper (7.7.26015): starting
01:56:46 (2581015): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 01:56:46] Arguments: --nthreads 8
[2025-07-25 01:56:46] Threads: 8
[2025-07-25 01:56:46] Checking for CVMFS
[2025-07-25 01:56:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 01:56:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 01:56:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 01:56:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 01:56:47] 2.12.6.0 2956151 15093 567984 148728 2 921 20525404 32935936 32842 16776704 0 162319460 99.620 183865243 27417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 01:56:47] CVMFS is ok
[2025-07-25 01:56:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 01:56:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 01:56:47] Further information can be found at the LHC@home message board.
[2025-07-25 01:56:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 01:56:47] Checking for apptainer binary...
[2025-07-25 01:56:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 01:56:47] Running /usr/bin/apptainer --version
[2025-07-25 01:56:47] apptainer version 1.4.1-1.el9
[2025-07-25 01:56:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 01:56:48] c7-9-15.aglt2.org
[2025-07-25 01:56:48] apptainer works
[2025-07-25 01:56:48] Set ATHENA_PROC_NUMBER=8
[2025-07-25 01:56:48] Set ATHENA_CORE_NUMBER=8
[2025-07-25 01:56:48] Starting ATLAS job with PandaID=6744932052
[2025-07-25 01:56:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 03:19:12]  *** The last 200 lines of the pilot log: ***
[2025-07-25 03:19:12]  scope=mc23_13p6TeV
[2025-07-25 03:19:12]  status=None
[2025-07-25 03:19:12]  status_code=0
[2025-07-25 03:19:12]  storage_token=
[2025-07-25 03:19:12]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6744932052/log.45743349._010092.job.log.tgz.1
[2025-07-25 03:19:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/5e/log.45743349._010092.job.log.tgz.1
[2025-07-25 03:19:12]  workdir=None
[2025-07-25 03:19:12] ]
[2025-07-25 03:19:12] 2025-07-25 07:18:24,142 | INFO     | transferring file log.45743349._010092.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6744932052/log.45743349._010092.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 03:19:12] 2025-07-25 07:18:24,142 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6744932052/log.45743349._010092.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._010092.job
[2025-07-25 03:19:12] 2025-07-25 07:18:24,163 | INFO     | adding to output.list: log.45743349._010092.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/5e/log.45743349._010092.job.log.tg
[2025-07-25 03:19:12] 2025-07-25 07:18:24,164 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 03:19:12] 2025-07-25 07:18:24,164 | INFO     | summary of transferred files:
[2025-07-25 03:19:12] 2025-07-25 07:18:24,164 | INFO     |  -- lfn=log.45743349._010092.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 03:19:12] 2025-07-25 07:18:24,164 | INFO     | stage-out finished correctly
[2025-07-25 03:19:12] 2025-07-25 07:18:26,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 03:19:12] 2025-07-25 07:18:27,108 | INFO     | job 6744932052 has state=finished
[2025-07-25 03:19:12] 2025-07-25 07:18:27,108 | INFO     | preparing for final server update for job 6744932052 in state='finished'
[2025-07-25 03:19:12] 2025-07-25 07:18:27,109 | INFO     | this job has now completed (state=finished)
[2025-07-25 03:19:12] 2025-07-25 07:18:27,109 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 03:19:12] 2025-07-25 07:18:27,109 | INFO     | log transfer has been attempted: DONE
[2025-07-25 03:19:12] 2025-07-25 07:18:27,109 | INFO     | job 6744932052 has finished - writing final server update
[2025-07-25 03:19:12] 2025-07-25 07:18:27,109 | INFO     | total number of processed events: 400 (read)
[2025-07-25 03:19:12] 2025-07-25 07:18:27,128 | INFO     | executing command: lscpu
[2025-07-25 03:19:12] 2025-07-25 07:18:27,255 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 03:19:12] 2025-07-25 07:18:27,421 | WARNING  | process 2630335 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 03:19:12] 2025-07-25 07:18:27,421 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6744932052/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 03:19:12] 2025-07-25 07:18:27,825 | INFO     | number of running child processes to parent process 2630335: 1
[2025-07-25 03:19:12] 2025-07-25 07:18:27,825 | INFO     | maximum number of monitored processes: 6
[2025-07-25 03:19:12] 2025-07-25 07:18:30,334 | INFO     | monitor loop #326: job 0:6744932052 is in state 'finished'
[2025-07-25 03:19:12] 2025-07-25 07:18:30,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 03:19:12] 2025-07-25 07:18:32,840 | INFO     | monitor loop #327: job 0:6744932052 is in state 'finished'
[2025-07-25 03:19:12] 2025-07-25 07:18:32,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 03:19:12] 2025-07-25 07:18:35,344 | INFO     | monitor loop #328: job 0:6744932052 is in state 'finished'
[2025-07-25 03:19:12] 2025-07-25 07:18:35,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 03:19:12] 2025-07-25 07:18:37,704 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-25 03:19:12] 2025-07-25 07:18:37,736 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3730.8710390624997
[2025-07-25 03:19:12] 2025-07-25 07:18:37,787 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6744932052/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 03:19:12] 2025-07-25 07:18:37,788 | INFO     | extracted standard info from prmon json
[2025-07-25 03:19:12] 2025-07-25 07:18:37,788 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 03:19:12] 2025-07-25 07:18:37,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 03:19:12] 2025-07-25 07:18:37,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 03:19:12] 2025-07-25 07:18:37,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 03:19:12] 2025-07-25 07:18:37,789 | INFO     | fitting pss+swap vs Time
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | sum of square deviations: 115715658.0
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | sum of deviations: -251610756.50000003
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | mean x: 1753425565.5
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | mean y: 2187321.2083333335
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | -- intersect: 3814815107.517904
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | intersect: 3814815107.517904
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | chi2: 0.02879880099488043
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | -- intersect: 3814815107.517904
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | current memory leak: -2.17 B/s (using 72 data points, chi2=0.03)
[2025-07-25 03:19:12] 2025-07-25 07:18:37,790 | INFO     | could have reported an average CPU frequency of 3716 MHz (6 samples)
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | ..............................
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . Timing measurements:
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . get job = 0 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . initial setup = 3 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . payload setup = 11 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . stage-in = 0 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . payload execution = 4811 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . stage-out = 0 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | . log creation = 0 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,791 | INFO     | ..............................
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | 
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | job summary report
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | --------------------------------------------------
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | PanDA job id: 6744932052
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | task id: 45743349
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | errors: (none)
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | pilot state: finished 
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | transexitcode: 0
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | exeerrorcode: 0
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | exeerrordiag: 
[2025-07-25 03:19:12] 2025-07-25 07:18:37,928 | INFO     | exitcode: 0
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | exitmsg: OK
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | cpuconsumptiontime: 26448 s
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | nevents: 400
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | neventsw: 0
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | pid: 2630335
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | pgrp: 2630335
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | corecount: 8
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | event service: False
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | sizes: {0: 2397473, 1: 2397501, 11: 2397501, 17: 2397791, 22: 2397819, 4827: 2424389, 4828: 2433387, 4830: 2433443, 4842: 2433637}
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | --------------------------------------------------
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | 
[2025-07-25 03:19:12] 2025-07-25 07:18:37,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-25 03:19:12] 2025-07-25 07:18:38,160 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | job 6744932052 has completed (purged errors)
[2025-07-25 03:19:12] 2025-07-25 07:18:38,161 | INFO     | overall cleanup function is called
[2025-07-25 03:19:12] 2025-07-25 07:18:39,002 | INFO     | PID=2595847 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 03:19:12] 2025-07-25 07:18:39,003 | INFO     | .. there are 42 such processes running
[2025-07-25 03:19:12] 2025-07-25 07:18:39,186 | INFO     | --- collectZombieJob: --- 10, [2630335]
[2025-07-25 03:19:12] 2025-07-25 07:18:39,186 | INFO     | zombie collector waiting for pid 2630335
[2025-07-25 03:19:12] 2025-07-25 07:18:39,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 03:19:12] 2025-07-25 07:18:39,186 | INFO     | collected zombie processes
[2025-07-25 03:19:12] 2025-07-25 07:18:39,186 | INFO     | will attempt to kill all subprocesses of pid=2630335
[2025-07-25 03:19:12] 2025-07-25 07:18:39,881 | INFO     | process IDs to be killed: [2630335] (in reverse order)
[2025-07-25 03:19:12] 2025-07-25 07:18:40,058 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 03:19:12] 2025-07-25 07:18:40,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 03:19:12] 2025-07-25 07:18:40,094 | INFO     | did not find any defunct processes belonging to 2630335
[2025-07-25 03:19:12] 2025-07-25 07:18:40,144 | INFO     | did not find any defunct processes belonging to 2630335
[2025-07-25 03:19:12] 2025-07-25 07:18:40,144 | INFO     | ready for new job
[2025-07-25 03:19:12] 2025-07-25 07:18:40,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 03:19:12] 2025-07-25 07:18:40,146 | INFO     | ***************************************
[2025-07-25 03:19:12] 2025-07-25 07:18:40,146 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 03:19:12] 2025-07-25 07:18:40,146 | INFO     | ***************************************
[2025-07-25 03:19:12] 2025-07-25 07:18:40,146 | INFO     | 
[2025-07-25 03:19:12] 2025-07-25 07:18:40,165 | INFO     | architecture information:
[2025-07-25 03:19:12] 2025-07-25 07:18:40,165 | INFO     | executing command: cat /etc/os-release
[2025-07-25 03:19:12] 2025-07-25 07:18:40,186 | INFO     | cat /etc/os-release:
[2025-07-25 03:19:12] NAME="CentOS Linux"
[2025-07-25 03:19:12] VERSION="7 (Core)"
[2025-07-25 03:19:12] ID="centos"
[2025-07-25 03:19:12] ID_LIKE="rhel fedora"
[2025-07-25 03:19:12] VERSION_ID="7"
[2025-07-25 03:19:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 03:19:12] ANSI_COLOR="0;31"
[2025-07-25 03:19:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 03:19:12] HOME_URL="https://www.centos.org/"
[2025-07-25 03:19:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 03:19:12] 
[2025-07-25 03:19:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 03:19:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 03:19:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 03:19:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 03:19:12] 
[2025-07-25 03:19:12] 2025-07-25 07:18:40,187 | INFO     | ***************************************
[2025-07-25 03:19:12] 2025-07-25 07:18:40,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-25 03:19:12] 2025-07-25 07:18:40,725 | INFO     | sufficient remaining disk space (74771857408 B)
[2025-07-25 03:19:12] 2025-07-25 07:18:40,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 03:19:12] 2025-07-25 07:18:40,725 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 03:19:12] 2025-07-25 07:18:40,725 | INFO     | update_server=False
[2025-07-25 03:19:12] 2025-07-25 07:18:40,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 03:19:12] 2025-07-25 07:18:40,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 03:19:12] 2025-07-25 07:18:41,084 | INFO     | all data control threads have been joined
[2025-07-25 03:19:12] 2025-07-25 07:18:41,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 03:19:12] 2025-07-25 07:18:41,386 | INFO     | aborting loop
[2025-07-25 03:19:12] 2025-07-25 07:18:41,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 03:19:12] 2025-07-25 07:18:41,640 | INFO     | all payload control threads have been joined
[2025-07-25 03:19:12] 2025-07-25 07:18:41,670 | INFO     | all job control threads have been joined
[2025-07-25 03:19:12] 2025-07-25 07:18:41,731 | INFO     | [job] retrieve thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:41,792 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:41,803 | INFO     | [payload] validate_post thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,089 | INFO     | [data] control thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,226 | INFO     | [job] validate thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,392 | INFO     | [job] job monitor thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,546 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,568 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,623 | INFO     | [data] copytool_in thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,645 | INFO     | [payload] control thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,676 | INFO     | [job] control thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,733 | INFO     | [data] copytool_out thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,850 | INFO     | [payload] failed_post thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:42,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 03:19:12] 2025-07-25 07:18:42,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:43,952 | INFO     | [job] queue monitor thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:45,438 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 03:19:12] 2025-07-25 07:18:45,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395094464320)>', '<ExcThread(monitor, started 140394746599168)>']
[2025-07-25 03:19:12] 2025-07-25 07:18:50,764 | INFO     | all workflow threads have been joined
[2025-07-25 03:19:12] 2025-07-25 07:18:50,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 03:19:12] 2025-07-25 07:18:50,764 | INFO     | traces error code: 0
[2025-07-25 03:19:12] 2025-07-25 07:18:50,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 03:19:12] 2025-07-25 07:19:11,887 | INFO     | PID=2595847 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 03:19:12] 2025-07-25 07:19:11,888 | INFO     | .. there are 42 such processes running
[2025-07-25 03:19:12] 2025-07-25 07:19:11,888 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 03:19:12] 2025-07-25 07:19:11,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 03:19:12] 2025-07-25 07:19:11,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 03:19:12] 2025-07-25 07:19:11,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 03:19:12] 2025-07-25 07:19:11,888 | INFO     | [monitor] control thread has ended
[2025-07-25 03:19:12] 2025-07-25 07:19:12,081 [wrapper] ==== pilot stdout END ====
[2025-07-25 03:19:12] 2025-07-25 07:19:12,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 03:19:12] 2025-07-25 07:19:12,131 [wrapper] pilotpid: 2595847
[2025-07-25 03:19:12] 2025-07-25 07:19:12,170 [wrapper] Pilot exit status: 0
[2025-07-25 03:19:12] 2025-07-25 07:19:12,293 [wrapper] pandaids: 6744932052
[2025-07-25 03:19:12] 2025-07-25 07:19:12,496 [wrapper] cleanup supervisor_pilot 3266092 2595848
[2025-07-25 03:19:12] 2025-07-25 07:19:12,536 [wrapper] Test setup, not cleaning
[2025-07-25 03:19:12] 2025-07-25 07:19:12,577 [wrapper] apfmon messages muted
[2025-07-25 03:19:12] 2025-07-25 07:19:12,589 [wrapper] ==== wrapper stdout END ====
[2025-07-25 03:19:12] 2025-07-25 07:19:12,599 [wrapper] ==== wrapper stderr END ====
[2025-07-25 03:19:12]  *** Error codes and diagnostics ***
[2025-07-25 03:19:12]     "exeErrorCode": 0,
[2025-07-25 03:19:12]     "exeErrorDiag": "",
[2025-07-25 03:19:12]     "pilotErrorCode": 0,
[2025-07-25 03:19:12]     "pilotErrorDiag": "",
[2025-07-25 03:19:12]  *** Listing of results directory ***
[2025-07-25 03:19:12] total 351792
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 17:07 pilot3.tar.gz
[2025-07-25 03:19:12] -rwx------. 1 boincer umatlas     36292 Jul 24 17:14 runpilot2-wrapper.sh
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 17:14 queuedata.json
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas       100 Jul 25 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 03:19:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 25 01:56 run_atlas
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas       105 Jul 25 01:56 job.xml
[2025-07-25 03:19:12] -rw-r--r--. 2 boincer umatlas 146364257 Jul 25 01:56 EVNT.45743347._000554.pool.root.1
[2025-07-25 03:19:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 01:56 start_atlas.sh
[2025-07-25 03:19:12] drwxrwx--x. 2 boincer umatlas      4096 Jul 25 01:56 shared
[2025-07-25 03:19:12] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 01:56 input.tar.gz
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas         0 Jul 25 01:56 boinc_lockfile
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas      2562 Jul 25 01:56 pandaJob.out
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas    979701 Jul 25 01:57 agis_schedconf.cvmfs.json
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas   1593052 Jul 25 01:57 agis_ddmendpoints.agis.ALL.json
[2025-07-25 03:19:12] drwx------. 4 boincer umatlas      4096 Jul 25 01:57 pilot3
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas       529 Jul 25 03:17 boinc_task_state.xml
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas 208475750 Jul 25 03:17 HITS.45743349._010092.pool.root.1
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas      1034 Jul 25 03:18 memory_monitor_summary.json
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas      7160 Jul 25 03:18 init_data.xml
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas    297498 Jul 25 03:18 log.45743349._010092.job.log.tgz.1
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas      7773 Jul 25 03:18 heartbeat.json
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 03:19 boinc_mmap_file
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas        27 Jul 25 03:19 wrapper_checkpoint.txt
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas       823 Jul 25 03:19 pilotlog.txt
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas        95 Jul 25 03:19 pilot_heartbeat.json
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas    460605 Jul 25 03:19 log.45743349._010092.job.log.1
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas       357 Jul 25 03:19 output.list
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas       620 Jul 25 03:19 runtime_log
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas    778240 Jul 25 03:19 result.tar.gz
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas      8655 Jul 25 03:19 runtime_log.err
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas       651 Jul 25 03:19 0YjNDmsRIz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYnNLDmxer09n.diag
[2025-07-25 03:19:12] -rw-r--r--. 1 boincer umatlas     22114 Jul 25 03:19 stderr.txt
[2025-07-25 03:19:12] HITS file was successfully produced:
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas 208475750 Jul 25 03:17 shared/HITS.pool.root.1
[2025-07-25 03:19:12]  *** Contents of shared directory: ***
[2025-07-25 03:19:12] total 347844
[2025-07-25 03:19:12] -rw-r--r--. 2 boincer umatlas 146364257 Jul 25 01:56 ATLAS.root_0
[2025-07-25 03:19:12] -rw-r--r--. 2 boincer umatlas     15095 Jul 25 01:56 start_atlas.sh
[2025-07-25 03:19:12] -rw-r--r--. 2 boincer umatlas    542888 Jul 25 01:56 input.tar.gz
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas 208475750 Jul 25 03:17 HITS.pool.root.1
[2025-07-25 03:19:12] -rw-------. 1 boincer umatlas    778240 Jul 25 03:19 result.tar.gz
03:19:14 (2581015): run_atlas exited; CPU time 26536.238684
03:19:14 (2581015): called boinc_finish(0)

</stderr_txt>
]]>

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