Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:14:14 (25986): wrapper (7.7.26015): starting
03:14:14 (25986): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 03:14:14] Arguments: --nthreads 8
[2025-07-26 03:14:14] Threads: 8
[2025-07-26 03:14:14] Checking for CVMFS
[2025-07-26 03:14:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 03:14:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 03:14:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 03:14:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 03:14:17] 2.11.2.0 16344 107414 136080 148758 0 211 17377456 25165824 4632 130560 0 80922151 99.871 46349061 3280 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 03:14:17] CVMFS is ok
[2025-07-26 03:14:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 03:14:17] Checking for apptainer binary...
[2025-07-26 03:14:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 03:14:17] Running /usr/bin/apptainer --version
[2025-07-26 03:14:17] apptainer version 1.3.2-1.el7
[2025-07-26 03:14:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:20:14] cg-vwn432.simple-grid.lan
[2025-07-26 06:20:14] apptainer works
[2025-07-26 06:20:15] Set ATHENA_PROC_NUMBER=8
[2025-07-26 06:20:15] Set ATHENA_CORE_NUMBER=8
[2025-07-26 06:20:15] Starting ATLAS job with PandaID=6744939048
[2025-07-26 06:20:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:13:14]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:13:14] 2025-07-26 08:59:17,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:13:14] 2025-07-26 08:59:17,219 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:13:14] 2025-07-26 08:59:17,220 | INFO     | sum of square deviations: 6239923508.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,223 | INFO     | sum of deviations: -54809841786.5
[2025-07-26 20:13:14] 2025-07-26 08:59:17,223 | INFO     | mean x: 1753511956.5
[2025-07-26 20:13:14] 2025-07-26 08:59:17,223 | INFO     | mean y: 2525983.856617647
[2025-07-26 20:13:14] 2025-07-26 08:59:17,223 | INFO     | -- intersect: 15404912372.613144
[2025-07-26 20:13:14] 2025-07-26 08:59:17,223 | INFO     | intersect: 15404912372.613144
[2025-07-26 20:13:14] 2025-07-26 08:59:17,231 | INFO     | chi2: 2.6098267422663874
[2025-07-26 20:13:14] 2025-07-26 08:59:17,231 | INFO     | sum of square deviations: 5902093918.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,234 | INFO     | sum of deviations: -35441233996.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,234 | INFO     | mean x: 1753511804.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,234 | INFO     | mean y: 2534605.7453183522
[2025-07-26 20:13:14] 2025-07-26 08:59:17,234 | INFO     | -- intersect: 10532123430.277487
[2025-07-26 20:13:14] 2025-07-26 08:59:17,234 | INFO     | intersect: 10532123430.277487
[2025-07-26 20:13:14] 2025-07-26 08:59:17,235 | INFO     | chi2: 1.8398792790965521
[2025-07-26 20:13:14] 2025-07-26 08:59:17,235 | INFO     | current chi2=1.8398792790965521 (change=29.50186120405866 %)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,235 | INFO     | sum of square deviations: 5576683165.5
[2025-07-26 20:13:14] 2025-07-26 08:59:17,237 | INFO     | sum of deviations: -34416796091.99999
[2025-07-26 20:13:14] 2025-07-26 08:59:17,238 | INFO     | mean x: 1753511651.5
[2025-07-26 20:13:14] 2025-07-26 08:59:17,238 | INFO     | mean y: 2535085.9083969467
[2025-07-26 20:13:14] 2025-07-26 08:59:17,238 | INFO     | -- intersect: 10824425296.199862
[2025-07-26 20:13:14] 2025-07-26 08:59:17,238 | INFO     | intersect: 10824425296.199862
[2025-07-26 20:13:14] 2025-07-26 08:59:17,238 | INFO     | chi2: 1.838267437073296
[2025-07-26 20:13:14] 2025-07-26 08:59:17,238 | INFO     | current chi2=1.838267437073296 (change=0.0876058577086379 %)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,238 | INFO     | right removable region: 261
[2025-07-26 20:13:14] 2025-07-26 08:59:17,239 | INFO     | sum of square deviations: 5902093918.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,241 | INFO     | sum of deviations: -100584695230.00003
[2025-07-26 20:13:14] 2025-07-26 08:59:17,250 | INFO     | mean x: 1753512109.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,250 | INFO     | mean y: 2546497.5468164794
[2025-07-26 20:13:14] 2025-07-26 08:59:17,250 | INFO     | -- intersect: 29886259551.988865
[2025-07-26 20:13:14] 2025-07-26 08:59:17,250 | INFO     | intersect: 29886259551.988865
[2025-07-26 20:13:14] 2025-07-26 08:59:17,250 | INFO     | chi2: 1.042207244893923
[2025-07-26 20:13:14] 2025-07-26 08:59:17,251 | INFO     | current chi2=1.042207244893923 (change=60.066037027850186 %)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,251 | INFO     | sum of square deviations: 5576683165.5
[2025-07-26 20:13:14] 2025-07-26 08:59:17,253 | INFO     | sum of deviations: -94855270138.49998
[2025-07-26 20:13:14] 2025-07-26 08:59:17,253 | INFO     | mean x: 1753512261.5
[2025-07-26 20:13:14] 2025-07-26 08:59:17,254 | INFO     | mean y: 2543805.1641221372
[2025-07-26 20:13:14] 2025-07-26 08:59:17,254 | INFO     | -- intersect: 29828494880.30317
[2025-07-26 20:13:14] 2025-07-26 08:59:17,254 | INFO     | intersect: 29828494880.30317
[2025-07-26 20:13:14] 2025-07-26 08:59:17,254 | INFO     | chi2: 1.0409543900523037
[2025-07-26 20:13:14] 2025-07-26 08:59:17,254 | INFO     | current chi2=1.0409543900523037 (change=0.12021168033108584 %)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,254 | INFO     | left removable region: 20
[2025-07-26 20:13:14] 2025-07-26 08:59:17,255 | INFO     | sum of square deviations: 4340323240.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,257 | INFO     | sum of deviations: -58433745920.99997
[2025-07-26 20:13:14] 2025-07-26 08:59:17,257 | INFO     | mean x: 1753512231.0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,257 | INFO     | mean y: 2546019.2904564315
[2025-07-26 20:13:14] 2025-07-26 08:59:17,257 | INFO     | -- intersect: 23610070738.03002
[2025-07-26 20:13:14] 2025-07-26 08:59:17,257 | INFO     | intersect: 23610070738.03002
[2025-07-26 20:13:14] 2025-07-26 08:59:17,257 | INFO     | chi2: 0.23342883072705697
[2025-07-26 20:13:14] 2025-07-26 08:59:17,258 | INFO     | -- intersect: 23610070738.03002
[2025-07-26 20:13:14] 2025-07-26 08:59:17,258 | INFO     | current memory leak: -13.46 B/s (using 241 data points, chi2=0.23)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,258 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | ..............................
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . Timing measurements:
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . get job = 0 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . initial setup = 2 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . payload setup = 13 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . stage-in = 0 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . payload execution = 16577 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . stage-out = 3 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | . log creation = 1 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,259 | INFO     | ..............................
[2025-07-26 20:13:14] 2025-07-26 08:59:17,407 | INFO     | 
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | job summary report
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | --------------------------------------------------
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | PanDA job id: 6744939048
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | task id: 45743349
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | errors: (none)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | pilot state: finished 
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | transexitcode: 0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | exeerrorcode: 0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,408 | INFO     | exeerrordiag: 
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | exitcode: 0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | exitmsg: OK
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | cpuconsumptiontime: 63262 s
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | nevents: 400
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | neventsw: 0
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | pid: 6578
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | pgrp: 6578
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | corecount: 8
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | event service: False
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | sizes: {0: 2396642, 1: 2397498, 9: 2397760, 12: 2397788, 16594: 2429006, 16599: 2438004, 16600: 2438188, 16699: 2438382}
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | --------------------------------------------------
[2025-07-26 20:13:14] 2025-07-26 08:59:17,409 | INFO     | 
[2025-07-26 20:13:14] 2025-07-26 08:59:17,410 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-26 20:13:14] 2025-07-26 08:59:17,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | job 6744939048 has completed (purged errors)
[2025-07-26 20:13:14] 2025-07-26 08:59:17,851 | INFO     | overall cleanup function is called
[2025-07-26 20:13:14] 2025-07-26 08:59:18,860 | INFO     | --- collectZombieJob: --- 10, [6578]
[2025-07-26 20:13:14] 2025-07-26 08:59:18,861 | INFO     | zombie collector waiting for pid 6578
[2025-07-26 20:13:14] 2025-07-26 08:59:18,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:13:14] 2025-07-26 08:59:18,861 | INFO     | collected zombie processes
[2025-07-26 20:13:14] 2025-07-26 08:59:18,861 | INFO     | will attempt to kill all subprocesses of pid=6578
[2025-07-26 20:13:14] 2025-07-26 08:59:18,993 | INFO     | process IDs to be killed: [6578] (in reverse order)
[2025-07-26 20:13:14] 2025-07-26 08:59:19,635 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:13:14] 2025-07-26 08:59:19,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:13:14] 2025-07-26 08:59:19,639 | INFO     | did not find any defunct processes belonging to 6578
[2025-07-26 20:13:14] 2025-07-26 08:59:19,642 | INFO     | did not find any defunct processes belonging to 6578
[2025-07-26 20:13:14] 2025-07-26 08:59:19,642 | INFO     | ready for new job
[2025-07-26 20:13:14] 2025-07-26 08:59:19,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:13:14] 2025-07-26 08:59:19,644 | INFO     | ***************************************
[2025-07-26 20:13:14] 2025-07-26 08:59:19,645 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:13:14] 2025-07-26 08:59:19,645 | INFO     | ***************************************
[2025-07-26 20:13:14] 2025-07-26 08:59:19,645 | INFO     | 
[2025-07-26 20:13:14] 2025-07-26 08:59:19,646 | INFO     | pilot is running in a VM
[2025-07-26 20:13:14] 2025-07-26 08:59:19,646 | INFO     | architecture information:
[2025-07-26 20:13:14] 2025-07-26 08:59:19,651 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:13:14] 2025-07-26 08:59:19,738 | INFO     | cat /etc/os-release:
[2025-07-26 20:13:14] NAME="CentOS Linux"
[2025-07-26 20:13:14] VERSION="7 (Core)"
[2025-07-26 20:13:14] ID="centos"
[2025-07-26 20:13:14] ID_LIKE="rhel fedora"
[2025-07-26 20:13:14] VERSION_ID="7"
[2025-07-26 20:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:13:14] ANSI_COLOR="0;31"
[2025-07-26 20:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:13:14] HOME_URL="https://www.centos.org/"
[2025-07-26 20:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:13:14] 
[2025-07-26 20:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:13:14] 
[2025-07-26 20:13:14] 2025-07-26 08:59:19,738 | INFO     | ***************************************
[2025-07-26 20:13:14] 2025-07-26 08:59:20,242 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-26 20:13:14] 2025-07-26 08:59:20,325 | INFO     | sufficient remaining disk space (496669556736 B)
[2025-07-26 20:13:14] 2025-07-26 08:59:20,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:13:14] 2025-07-26 08:59:20,326 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:13:14] 2025-07-26 08:59:20,326 | INFO     | update_server=False
[2025-07-26 20:13:14] 2025-07-26 08:59:20,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:13:14] 2025-07-26 08:59:20,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:13:14] 2025-07-26 08:59:20,552 | INFO     | all job control threads have been joined
[2025-07-26 20:13:14] 2025-07-26 08:59:20,699 | INFO     | all data control threads have been joined
[2025-07-26 20:13:14] 2025-07-26 08:59:20,794 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 20:13:14] 2025-07-26 08:59:20,795 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 20:13:14] 2025-07-26 08:59:20,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:13:14] 2025-07-26 08:59:20,795 | INFO     | will abort loop
[2025-07-26 20:13:14] 2025-07-26 08:59:21,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:13:14] 2025-07-26 08:59:21,332 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:21,357 | INFO     | all payload control threads have been joined
[2025-07-26 20:13:14] 2025-07-26 08:59:21,529 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:21,558 | INFO     | [job] control thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:21,704 | INFO     | [data] control thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:21,800 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:21,853 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:22,177 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:22,221 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:22,363 | INFO     | [payload] control thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:22,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:13:14] 2025-07-26 08:59:22,589 | INFO     | [job] validate thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:22,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:22,806 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:22,831 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:23,055 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:23,418 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:24,335 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:13:14] 2025-07-26 08:59:25,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914498557760)>', '<ExcThread(monitor, started 139913911588608)>']
[2025-07-26 20:13:14] 2025-07-26 08:59:30,769 | INFO     | all workflow threads have been joined
[2025-07-26 20:13:14] 2025-07-26 08:59:30,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:13:14] 2025-07-26 08:59:30,770 | INFO     | traces error code: 0
[2025-07-26 20:13:14] 2025-07-26 08:59:30,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:13:14] 2025-07-26 08:59:49,111 | INFO     | PID=32426 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 20:13:14] 2025-07-26 08:59:49,112 | INFO     | .. there are 9 such processes running
[2025-07-26 20:13:14] 2025-07-26 08:59:49,113 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:13:14] 2025-07-26 08:59:49,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:13:14] 2025-07-26 08:59:49,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:13:14] 2025-07-26 08:59:49,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:13:14] 2025-07-26 08:59:49,114 | INFO     | [monitor] control thread has ended
[2025-07-26 20:13:14] 2025-07-26 08:59:49,473 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:13:14] 2025-07-26 08:59:49,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:13:14] 2025-07-26 08:59:49,677 [wrapper] pilotpid: 32426
[2025-07-26 20:13:14] 2025-07-26 08:59:49,790 [wrapper] Pilot exit status: 0
[2025-07-26 20:13:14] 2025-07-26 08:59:50,308 [wrapper] pandaids: 6744939048
[2025-07-26 20:13:14] 2025-07-26 08:59:51,377 [wrapper] cleanup supervisor_pilot 17073 32427
[2025-07-26 20:13:14] 2025-07-26 08:59:51,426 [wrapper] Test setup, not cleaning
[2025-07-26 20:13:14] 2025-07-26 08:59:51,482 [wrapper] apfmon messages muted
[2025-07-26 20:13:14] 2025-07-26 08:59:51,499 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:13:14] 2025-07-26 08:59:51,575 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:13:14]  *** Error codes and diagnostics ***
[2025-07-26 20:13:14]     "exeErrorCode": 0,
[2025-07-26 20:13:14]     "exeErrorDiag": "",
[2025-07-26 20:13:14]     "pilotErrorCode": 0,
[2025-07-26 20:13:14]     "pilotErrorDiag": "",
[2025-07-26 20:13:14]  *** Listing of results directory ***
[2025-07-26 20:13:14] total 359196
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc    530466 Jul 25 01:14 pilot3.tar.gz
[2025-07-26 20:13:14] -rwx------. 1 boinc boinc     36292 Jul 25 01:28 runpilot2-wrapper.sh
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc      5112 Jul 25 01:28 queuedata.json
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc       100 Jul 26 03:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:13:14] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 03:14 run_atlas
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc       105 Jul 26 03:14 job.xml
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc      6390 Jul 26 03:14 init_data.xml
[2025-07-26 20:13:14] -rw-r--r--. 2 boinc boinc 149960217 Jul 26 03:14 EVNT.45743347._000681.pool.root.1
[2025-07-26 20:13:14] -rw-r--r--. 2 boinc boinc     15095 Jul 26 03:14 start_atlas.sh
[2025-07-26 20:13:14] drwxrwx--x. 2 boinc boinc        68 Jul 26 03:14 shared
[2025-07-26 20:13:14] -rw-r--r--. 2 boinc boinc    542878 Jul 26 03:14 input.tar.gz
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc         0 Jul 26 03:14 boinc_lockfile
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc      2560 Jul 26 06:20 pandaJob.out
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc    980001 Jul 26 06:20 agis_schedconf.cvmfs.json
[2025-07-26 20:13:14] drwx------. 4 boinc boinc      4096 Jul 26 06:20 pilot3
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc 210345677 Jul 26 10:56 HITS.45743349._012674.pool.root.1
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc       530 Jul 26 10:56 boinc_task_state.xml
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc      1020 Jul 26 10:57 memory_monitor_summary.json
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc   1593052 Jul 26 10:57 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc    395984 Jul 26 10:57 log.45743349._012674.job.log.tgz.1
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc      7780 Jul 26 10:59 heartbeat.json
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc        95 Jul 26 10:59 pilot_heartbeat.json
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc       820 Jul 26 10:59 pilotlog.txt
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc   1432971 Jul 26 10:59 log.45743349._012674.job.log.1
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc       357 Jul 26 10:59 output.list
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc       620 Jul 26 10:59 runtime_log
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc   1843200 Jul 26 10:59 result.tar.gz
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc      8660 Jul 26 10:59 runtime_log.err
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc       657 Jul 26 10:59 pTEODmnXKz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCBOLDm0a7OKn.diag
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc      8192 Jul 26 20:13 boinc_mmap_file
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc        28 Jul 26 20:13 wrapper_checkpoint.txt
[2025-07-26 20:13:14] -rw-r--r--. 1 boinc boinc     20599 Jul 26 20:13 stderr.txt
[2025-07-26 20:13:14] HITS file was successfully produced:
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc 210345677 Jul 26 10:56 shared/HITS.pool.root.1
[2025-07-26 20:13:14]  *** Contents of shared directory: ***
[2025-07-26 20:13:14] total 354212
[2025-07-26 20:13:14] -rw-r--r--. 2 boinc boinc 149960217 Jul 26 03:14 ATLAS.root_0
[2025-07-26 20:13:14] -rw-r--r--. 2 boinc boinc     15095 Jul 26 03:14 start_atlas.sh
[2025-07-26 20:13:14] -rw-r--r--. 2 boinc boinc    542878 Jul 26 03:14 input.tar.gz
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc 210345677 Jul 26 10:56 HITS.pool.root.1
[2025-07-26 20:13:14] -rw-------. 1 boinc boinc   1843200 Jul 26 10:59 result.tar.gz
20:13:16 (25986): run_atlas exited; CPU time 63467.846911
20:13:16 (25986): called boinc_finish(0)

</stderr_txt>
]]>

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