Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:39:38 (4104736): wrapper (7.7.26015): starting
19:39:38 (4104736): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 19:39:38] Arguments: --nthreads 4
[2025-07-27 19:39:38] Threads: 4
[2025-07-27 19:39:38] Checking for CVMFS
[2025-07-27 19:39:38] No cvmfs_config command found, will try listing directly
[2025-07-27 19:39:38] CVMFS is ok
[2025-07-27 19:39:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:39:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:39:38] Further information can be found at the LHC@home message board.
[2025-07-27 19:39:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:39:38] Checking for apptainer binary...
[2025-07-27 19:39:38] which: no apptainer in ((null))
[2025-07-27 19:39:38] apptainer is not installed, using version from CVMFS
[2025-07-27 19:39:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:39:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-27 19:39:38] apptainer works
[2025-07-27 19:39:38] Set ATHENA_PROC_NUMBER=4
[2025-07-27 19:39:38] Set ATHENA_CORE_NUMBER=4
[2025-07-27 19:39:38] Starting ATLAS job with PandaID=6744938446
[2025-07-27 19:39:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:51:53 (310335): wrapper (7.7.26015): starting
21:51:53 (310335): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 21:51:53] Arguments: --nthreads 4
[2025-07-27 21:51:53] Threads: 4
[2025-07-27 21:51:53] This job has been restarted, cleaning up previous attempt
[2025-07-27 21:51:53] Checking for CVMFS
[2025-07-27 21:51:53] No cvmfs_config command found, will try listing directly
[2025-07-27 21:51:53] CVMFS is ok
[2025-07-27 21:51:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 21:51:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 21:51:53] Further information can be found at the LHC@home message board.
[2025-07-27 21:51:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:51:53] Checking for apptainer binary...
[2025-07-27 21:51:53] which: no apptainer in ((null))
[2025-07-27 21:51:53] apptainer is not installed, using version from CVMFS
[2025-07-27 21:51:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:51:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-07-27 21:51:53] apptainer works
[2025-07-27 21:51:53] Set ATHENA_PROC_NUMBER=4
[2025-07-27 21:51:53] Set ATHENA_CORE_NUMBER=4
[2025-07-27 21:51:53] Starting ATLAS job with PandaID=6744938446
[2025-07-27 21:51:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 01:11:08]  *** The last 200 lines of the pilot log: ***
[2025-07-28 01:11:08] 2025-07-27 23:10:34,667 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 01:11:08] 2025-07-27 23:10:34,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 01:11:08] 2025-07-27 23:10:34,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 01:11:08] 2025-07-27 23:10:34,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 01:11:08] 2025-07-27 23:10:34,672 | INFO     | fitting pss+swap vs Time
[2025-07-28 01:11:08] 2025-07-27 23:10:34,672 | INFO     | sum of square deviations: 2299168690.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,673 | INFO     | sum of deviations: 32331611131.999996
[2025-07-28 01:11:08] 2025-07-27 23:10:34,673 | INFO     | mean x: 1753651867.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,673 | INFO     | mean y: 2320252.5487179486
[2025-07-28 01:11:08] 2025-07-27 23:10:34,674 | INFO     | -- intersect: -24658066987.13215
[2025-07-28 01:11:08] 2025-07-27 23:10:34,674 | INFO     | intersect: -24658066987.13215
[2025-07-28 01:11:08] 2025-07-27 23:10:34,674 | INFO     | chi2: 1.4555986677059294
[2025-07-28 01:11:08] 2025-07-27 23:10:34,674 | INFO     | sum of square deviations: 2126802667.5
[2025-07-28 01:11:08] 2025-07-27 23:10:34,675 | INFO     | sum of deviations: 31350482709.500004
[2025-07-28 01:11:08] 2025-07-27 23:10:34,676 | INFO     | mean x: 1753651714.5
[2025-07-28 01:11:08] 2025-07-27 23:10:34,676 | INFO     | mean y: 2319384.3842105265
[2025-07-28 01:11:08] 2025-07-27 23:10:34,676 | INFO     | -- intersect: -25847670647.1509
[2025-07-28 01:11:08] 2025-07-27 23:10:34,676 | INFO     | intersect: -25847670647.1509
[2025-07-28 01:11:08] 2025-07-27 23:10:34,676 | INFO     | chi2: 1.4562261964374978
[2025-07-28 01:11:08] 2025-07-27 23:10:34,676 | INFO     | current chi2=1.4562261964374978 (change=-0.043111384029875924 %)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,676 | INFO     | right removable region: 189
[2025-07-28 01:11:08] 2025-07-27 23:10:34,677 | INFO     | sum of square deviations: 2126802667.5
[2025-07-28 01:11:08] 2025-07-27 23:10:34,678 | INFO     | sum of deviations: 4364127818.999999
[2025-07-28 01:11:08] 2025-07-27 23:10:34,678 | INFO     | mean x: 1753652019.5
[2025-07-28 01:11:08] 2025-07-27 23:10:34,678 | INFO     | mean y: 2344710.547368421
[2025-07-28 01:11:08] 2025-07-27 23:10:34,678 | INFO     | -- intersect: -3596090480.50003
[2025-07-28 01:11:08] 2025-07-27 23:10:34,678 | INFO     | intersect: -3596090480.50003
[2025-07-28 01:11:08] 2025-07-27 23:10:34,678 | INFO     | chi2: 0.012984709034573303
[2025-07-28 01:11:08] 2025-07-27 23:10:34,678 | INFO     | current chi2=0.012984709034573303 (change=99.10794717509341 %)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,679 | INFO     | sum of square deviations: 1963274020.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,680 | INFO     | sum of deviations: 1550697287.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,680 | INFO     | mean x: 1753652172.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,680 | INFO     | mean y: 2347312.054054054
[2025-07-28 01:11:08] 2025-07-27 23:10:34,680 | INFO     | -- intersect: -1382779592.167934
[2025-07-28 01:11:08] 2025-07-27 23:10:34,680 | INFO     | intersect: -1382779592.167934
[2025-07-28 01:11:08] 2025-07-27 23:10:34,680 | INFO     | chi2: 0.001795364232329614
[2025-07-28 01:11:08] 2025-07-27 23:10:34,681 | INFO     | current chi2=0.001795364232329614 (change=86.1732424843002 %)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,681 | INFO     | sum of square deviations: 1808350185.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,682 | INFO     | sum of deviations: 1521890769.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,682 | INFO     | mean x: 1753652324.5
[2025-07-28 01:11:08] 2025-07-27 23:10:34,682 | INFO     | mean y: 2347338.1555555556
[2025-07-28 01:11:08] 2025-07-27 23:10:34,682 | INFO     | -- intersect: -1473510217.991371
[2025-07-28 01:11:08] 2025-07-27 23:10:34,682 | INFO     | intersect: -1473510217.991371
[2025-07-28 01:11:08] 2025-07-27 23:10:34,683 | INFO     | chi2: 0.0017564730927344607
[2025-07-28 01:11:08] 2025-07-27 23:10:34,683 | INFO     | current chi2=0.0017564730927344607 (change=2.1661977494499376 %)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,683 | INFO     | left removable region: 30
[2025-07-28 01:11:08] 2025-07-27 23:10:34,683 | INFO     | sum of square deviations: 1246386160.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,684 | INFO     | sum of deviations: 1611469208.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,684 | INFO     | mean x: 1753652599.0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,684 | INFO     | mean y: 2346878.572327044
[2025-07-28 01:11:08] 2025-07-27 23:10:34,684 | INFO     | -- intersect: -2264973840.7284
[2025-07-28 01:11:08] 2025-07-27 23:10:34,684 | INFO     | intersect: -2264973840.7284
[2025-07-28 01:11:08] 2025-07-27 23:10:34,685 | INFO     | chi2: 0.0003612665859358831
[2025-07-28 01:11:08] 2025-07-27 23:10:34,685 | INFO     | -- intersect: -2264973840.7284
[2025-07-28 01:11:08] 2025-07-27 23:10:34,685 | INFO     | current memory leak: 1.29 B/s (using 159 data points, chi2=0.00)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,685 | INFO     | could have reported an average CPU frequency of 2577 MHz (10 samples)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,686 | INFO     | ..............................
[2025-07-28 01:11:08] 2025-07-27 23:10:34,686 | INFO     | . Timing measurements:
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | . get job = 0 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | . initial setup = 1 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | . payload setup = 6 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | . stage-in = 0 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | . payload execution = 11874 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | . stage-out = 1 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | . log creation = 0 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,687 | INFO     | ..............................
[2025-07-28 01:11:08] 2025-07-27 23:10:34,784 | INFO     | 
[2025-07-28 01:11:08] 2025-07-27 23:10:34,784 | INFO     | job summary report
[2025-07-28 01:11:08] 2025-07-27 23:10:34,784 | INFO     | --------------------------------------------------
[2025-07-28 01:11:08] 2025-07-27 23:10:34,784 | INFO     | PanDA job id: 6744938446
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | task id: 45743349
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | errors: (none)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | pilot state: finished 
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | transexitcode: 0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | exeerrorcode: 0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | exeerrordiag: 
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | exitcode: 0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | exitmsg: OK
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | cpuconsumptiontime: 45617 s
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | nevents: 400
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | neventsw: 0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,785 | INFO     | pid: 321354
[2025-07-28 01:11:08] 2025-07-27 23:10:34,786 | INFO     | pgrp: 321354
[2025-07-28 01:11:08] 2025-07-27 23:10:34,786 | INFO     | corecount: 4
[2025-07-28 01:11:08] 2025-07-27 23:10:34,786 | INFO     | event service: False
[2025-07-28 01:11:08] 2025-07-27 23:10:34,786 | INFO     | sizes: {0: 2397313, 1: 2397512, 5: 2397774, 11: 2397830, 11885: 2427271, 11888: 2436291, 11890: 2436475, 11897: 2436669}
[2025-07-28 01:11:08] 2025-07-27 23:10:34,786 | INFO     | --------------------------------------------------
[2025-07-28 01:11:08] 2025-07-27 23:10:34,786 | INFO     | 
[2025-07-28 01:11:08] 2025-07-27 23:10:34,786 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-07-28 01:11:08] 2025-07-27 23:10:34,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | job 6744938446 has completed (purged errors)
[2025-07-28 01:11:08] 2025-07-27 23:10:34,812 | INFO     | overall cleanup function is called
[2025-07-28 01:11:08] 2025-07-27 23:10:35,819 | INFO     | --- collectZombieJob: --- 10, [321354]
[2025-07-28 01:11:08] 2025-07-27 23:10:35,819 | INFO     | zombie collector waiting for pid 321354
[2025-07-28 01:11:08] 2025-07-27 23:10:35,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 01:11:08] 2025-07-27 23:10:35,819 | INFO     | collected zombie processes
[2025-07-28 01:11:08] 2025-07-27 23:10:35,820 | INFO     | will attempt to kill all subprocesses of pid=321354
[2025-07-28 01:11:08] 2025-07-27 23:10:36,139 | INFO     | process IDs to be killed: [321354] (in reverse order)
[2025-07-28 01:11:08] 2025-07-27 23:10:36,252 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 01:11:08] 2025-07-27 23:10:36,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 01:11:08] 2025-07-27 23:10:36,261 | INFO     | did not find any defunct processes belonging to 321354
[2025-07-28 01:11:08] 2025-07-27 23:10:36,270 | INFO     | did not find any defunct processes belonging to 321354
[2025-07-28 01:11:08] 2025-07-27 23:10:36,271 | INFO     | ready for new job
[2025-07-28 01:11:08] 2025-07-27 23:10:36,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 01:11:08] 2025-07-27 23:10:36,273 | INFO     | ***************************************
[2025-07-28 01:11:08] 2025-07-27 23:10:36,273 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 01:11:08] 2025-07-27 23:10:36,273 | INFO     | ***************************************
[2025-07-28 01:11:08] 2025-07-27 23:10:36,273 | INFO     | 
[2025-07-28 01:11:08] 2025-07-27 23:10:36,276 | INFO     | architecture information:
[2025-07-28 01:11:08] 2025-07-27 23:10:36,276 | INFO     | executing command: cat /etc/os-release
[2025-07-28 01:11:08] 2025-07-27 23:10:36,287 | INFO     | cat /etc/os-release:
[2025-07-28 01:11:08] NAME="CentOS Linux"
[2025-07-28 01:11:08] VERSION="7 (Core)"
[2025-07-28 01:11:08] ID="centos"
[2025-07-28 01:11:08] ID_LIKE="rhel fedora"
[2025-07-28 01:11:08] VERSION_ID="7"
[2025-07-28 01:11:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 01:11:08] ANSI_COLOR="0;31"
[2025-07-28 01:11:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 01:11:08] HOME_URL="https://www.centos.org/"
[2025-07-28 01:11:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 01:11:08] 
[2025-07-28 01:11:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 01:11:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 01:11:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 01:11:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 01:11:08] 
[2025-07-28 01:11:08] 2025-07-27 23:10:36,287 | INFO     | ***************************************
[2025-07-28 01:11:08] 2025-07-27 23:10:36,789 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-07-28 01:11:08] 2025-07-27 23:10:36,806 | INFO     | sufficient remaining disk space (670775115776 B)
[2025-07-28 01:11:08] 2025-07-27 23:10:36,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 01:11:08] 2025-07-27 23:10:36,807 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 01:11:08] 2025-07-27 23:10:36,807 | INFO     | update_server=False
[2025-07-28 01:11:08] 2025-07-27 23:10:36,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 01:11:08] 2025-07-27 23:10:36,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 01:11:08] 2025-07-27 23:10:36,857 | INFO     | all payload control threads have been joined
[2025-07-28 01:11:08] 2025-07-27 23:10:37,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:11:08] 2025-07-27 23:10:37,015 | INFO     | aborting loop
[2025-07-28 01:11:08] 2025-07-27 23:10:37,313 | INFO     | all job control threads have been joined
[2025-07-28 01:11:08] 2025-07-27 23:10:37,751 | INFO     | all data control threads have been joined
[2025-07-28 01:11:08] 2025-07-27 23:10:37,812 | INFO     | [job] retrieve thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:37,861 | INFO     | [payload] control thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,020 | INFO     | [job] job monitor thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,318 | INFO     | [job] control thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 01:11:08] 2025-07-27 23:10:38,439 | INFO     | [payload] validate_post thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,474 | INFO     | [job] validate thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,589 | INFO     | [payload] failed_post thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,713 | INFO     | [data] copytool_in thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,756 | INFO     | [data] control thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,787 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,808 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,812 | INFO     | [data] copytool_out thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:38,891 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:39,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:39,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 01:11:08] 2025-07-27 23:10:40,800 | INFO     | [job] queue monitor thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:42,400 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 01:11:08] 2025-07-27 23:10:43,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22722336728896)>', '<ExcThread(monitor, started 22722105022208)>']
[2025-07-28 01:11:08] 2025-07-27 23:10:48,331 | INFO     | all workflow threads have been joined
[2025-07-28 01:11:08] 2025-07-27 23:10:48,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 01:11:08] 2025-07-27 23:10:48,331 | INFO     | traces error code: 0
[2025-07-28 01:11:08] 2025-07-27 23:10:48,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 01:11:08] 2025-07-27 23:11:08,231 | INFO     | PID=314012 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-28 01:11:08] 2025-07-27 23:11:08,232 | INFO     | .. there are 13 such processes running
[2025-07-28 01:11:08] 2025-07-27 23:11:08,232 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 01:11:08] 2025-07-27 23:11:08,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 01:11:08] 2025-07-27 23:11:08,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 01:11:08] 2025-07-27 23:11:08,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 01:11:08] 2025-07-27 23:11:08,233 | INFO     | [monitor] control thread has ended
[2025-07-28 01:11:08] 2025-07-27 23:11:08,378 [wrapper] ==== pilot stdout END ====
[2025-07-28 01:11:08] 2025-07-27 23:11:08,381 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 01:11:08] 2025-07-27 23:11:08,383 [wrapper] pilotpid: 314012
[2025-07-28 01:11:08] 2025-07-27 23:11:08,386 [wrapper] Pilot exit status: 0
[2025-07-28 01:11:08] 2025-07-27 23:11:08,395 [wrapper] pandaids: 6744938446 6744938446
[2025-07-28 01:11:08] 2025-07-27 23:11:08,454 [wrapper] cleanup supervisor_pilot  888670 314013
[2025-07-28 01:11:08] 2025-07-27 23:11:08,457 [wrapper] Test setup, not cleaning
[2025-07-28 01:11:08] 2025-07-27 23:11:08,460 [wrapper] apfmon messages muted
[2025-07-28 01:11:08] 2025-07-27 23:11:08,462 [wrapper] ==== wrapper stdout END ====
[2025-07-28 01:11:08] 2025-07-27 23:11:08,465 [wrapper] ==== wrapper stderr END ====
[2025-07-28 01:11:08]  *** Error codes and diagnostics ***
[2025-07-28 01:11:08]     "exeErrorCode": 0,
[2025-07-28 01:11:08]     "exeErrorDiag": "",
[2025-07-28 01:11:08]     "pilotErrorCode": 0,
[2025-07-28 01:11:08]     "pilotErrorDiag": "",
[2025-07-28 01:11:08]  *** Listing of results directory ***
[2025-07-28 01:11:08] total 660608
[2025-07-28 01:11:08] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc    530466 Jul 25 00:31 pilot3.tar.gz
[2025-07-28 01:11:08] -rwx------ 1 boinc boinc     36292 Jul 25 00:55 runpilot2-wrapper.sh
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc      5112 Jul 25 00:55 queuedata.json
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc       100 Jul 27 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 01:11:08] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 19:39 run_atlas
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc       105 Jul 27 19:39 job.xml
[2025-07-28 01:11:08] -rw-r--r-- 3 boinc boinc 230901527 Jul 27 19:39 EVNT.45743347._000656.pool.root.1
[2025-07-28 01:11:08] -rw-r--r-- 3 boinc boinc 230901527 Jul 27 19:39 ATLAS.root_0
[2025-07-28 01:11:08] -rw-r--r-- 2 boinc boinc     15095 Jul 27 19:39 start_atlas.sh
[2025-07-28 01:11:08] drwxrwx--x 2 boinc boinc      4096 Jul 27 19:39 shared
[2025-07-28 01:11:08] -rw-r--r-- 2 boinc boinc    542884 Jul 27 19:39 input.tar.gz
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc         0 Jul 27 19:39 boinc_lockfile
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc      6643 Jul 27 21:51 init_data.xml
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc      2562 Jul 27 21:51 pandaJob.out
[2025-07-28 01:11:08] -rw------- 1 boinc boinc    980125 Jul 27 21:52 agis_schedconf.cvmfs.json
[2025-07-28 01:11:08] -rw------- 1 boinc boinc 207904976 Jul 28 01:09 HITS.45743349._012189.pool.root.1
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc       530 Jul 28 01:10 boinc_task_state.xml
[2025-07-28 01:11:08] -rw------- 1 boinc boinc        96 Jul 28 01:10 pilot_heartbeat.json
[2025-07-28 01:11:08] -rw------- 1 boinc boinc      1037 Jul 28 01:10 memory_monitor_summary.json
[2025-07-28 01:11:08] -rw------- 1 boinc boinc   1593052 Jul 28 01:10 agis_ddmendpoints.agis.ALL.json
[2025-07-28 01:11:08] -rw------- 1 boinc boinc    313616 Jul 28 01:10 log.45743349._012189.job.log.tgz.1
[2025-07-28 01:11:08] -rw------- 1 boinc boinc      7829 Jul 28 01:10 heartbeat.json
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc        28 Jul 28 01:10 wrapper_checkpoint.txt
[2025-07-28 01:11:08] -rw------- 1 boinc boinc       822 Jul 28 01:11 pilotlog.txt
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc      8192 Jul 28 01:11 boinc_mmap_file
[2025-07-28 01:11:08] -rw------- 1 boinc boinc   1120218 Jul 28 01:11 log.45743349._012189.job.log.1
[2025-07-28 01:11:08] -rw------- 1 boinc boinc       357 Jul 28 01:11 output.list
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc       620 Jul 28 01:11 runtime_log
[2025-07-28 01:11:08] -rw------- 1 boinc boinc   1454080 Jul 28 01:11 result.tar.gz
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc      9104 Jul 28 01:11 runtime_log.err
[2025-07-28 01:11:08] -rw------- 1 boinc boinc       790 Jul 28 01:11 aSYLDmu1Jz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm02xKDmK50lbn.diag
[2025-07-28 01:11:08] -rw-r--r-- 1 boinc boinc     22599 Jul 28 01:11 stderr.txt
[2025-07-28 01:11:08] HITS file was successfully produced:
[2025-07-28 01:11:08] -rw------- 1 boinc boinc 207904976 Jul 28 01:09 shared/HITS.pool.root.1
[2025-07-28 01:11:08]  *** Contents of shared directory: ***
[2025-07-28 01:11:08] total 430504
[2025-07-28 01:11:08] -rw-r--r-- 3 boinc boinc 230901527 Jul 27 19:39 ATLAS.root_0
[2025-07-28 01:11:08] -rw-r--r-- 2 boinc boinc     15095 Jul 27 19:39 start_atlas.sh
[2025-07-28 01:11:08] -rw-r--r-- 2 boinc boinc    542884 Jul 27 19:39 input.tar.gz
[2025-07-28 01:11:08] -rw------- 1 boinc boinc 207904976 Jul 28 01:09 HITS.pool.root.1
[2025-07-28 01:11:08] -rw------- 1 boinc boinc   1454080 Jul 28 01:11 result.tar.gz
01:11:09 (310335): run_atlas exited; CPU time 46017.057541
01:11:09 (310335): called boinc_finish(0)

</stderr_txt>
]]>

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