Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 02:39:44 (7776): Detected: vboxwrapper 26206
2025-07-27 02:39:44 (7776): Detected: BOINC client v8.2.4
2025-07-27 02:39:45 (7776): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-07-27 02:39:46 (7776): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 02:39:46 (7776): Create VM. (boinc_d1f9dffe3fb9fcc3, slot#0)
2025-07-27 02:39:47 (7776): Setting Memory Size for VM. (4400MB)
2025-07-27 02:39:47 (7776): Setting CPU Count for VM. (4)
2025-07-27 02:39:47 (7776): Setting Chipset Options for VM.
2025-07-27 02:39:48 (7776): Setting Graphics Controller Options for VM.
2025-07-27 02:39:48 (7776): Setting Boot Options for VM.
2025-07-27 02:39:48 (7776): Setting Network Configuration for NAT.
2025-07-27 02:39:49 (7776): Enabling VM Network Access.
2025-07-27 02:39:49 (7776): Disabling USB Support for VM.
2025-07-27 02:39:49 (7776): Disabling COM Port Support for VM.
2025-07-27 02:39:49 (7776): Disabling LPT Port Support for VM.
2025-07-27 02:39:50 (7776): Disabling Audio Support for VM.
2025-07-27 02:39:50 (7776): Disabling Clipboard Support for VM.
2025-07-27 02:39:50 (7776): Disabling Drag and Drop Support for VM.
2025-07-27 02:39:50 (7776): Adding storage controller(s) to VM.
2025-07-27 02:39:51 (7776): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 02:39:54 (7776): Adding VirtualBox Guest Additions to VM.
2025-07-27 02:39:54 (7776): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 02:39:54 (7776): forwarding host port 49989 to guest port 80
2025-07-27 02:39:55 (7776): Enabling remote desktop for VM.
2025-07-27 02:39:55 (7776): Required extension pack not installed, remote desktop not enabled.
2025-07-27 02:39:55 (7776): Enabling shared directory for VM.
2025-07-27 02:39:55 (7776): Starting VM using VBoxManage interface. (boinc_d1f9dffe3fb9fcc3, slot#0)
2025-07-27 02:40:02 (7776): Successfully started VM. (PID = '22440')
2025-07-27 02:40:02 (7776): Reporting VM Process ID to BOINC.
2025-07-27 02:40:02 (7776): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-27 02:40:02 (7776): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 02:40:02 (7776): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 02:40:02 (7776): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 02:40:02 (7776): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 02:40:02 (7776): Detected: Web Application Enabled (http://localhost:49989)
2025-07-27 02:40:02 (7776): Preference change detected
2025-07-27 02:40:02 (7776): Setting CPU throttle for VM. (100%)
2025-07-27 02:40:03 (7776): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 02:40:04 (7776): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 02:40:04 (7776): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 02:40:07 (7776): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 02:40:07 (7776): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 02:40:07 (7776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 02:40:13 (7776): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 02:40:13 (7776): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 02:40:23 (7776): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.000211 main     Log opened 2025-07-27T02:40:21.882725000Z
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.000410 main     OS Product: Linux
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.000479 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.000526 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.000569 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.000570 main     Process ID: 1312
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.000571 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 02:40:23 (7776): Guest Log: 00:00:00.003773 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 02:40:24 (7776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 02:40:24 (7776): Guest Log: [INFO] Mounting shared directory
2025-07-27 02:40:24 (7776): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 02:40:33 (7776): Guest Log: 00:00:10.008296 timesync vgsvcTimeSyncWorker: Radical guest time change: -35 988 038 481 000ns (GuestNow=1 753 548 033 850 632 000 ns GuestLast=1 753 584 021 889 113 000 ns fSetTimeLastLoop=true )
2025-07-27 02:40:33 (7776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 02:40:34 (7776): Guest Log: [INFO] Detected branch: prod
2025-07-27 02:40:34 (7776): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 02:40:34 (7776): Guest Log: Copying input files
2025-07-27 02:40:37 (7776): Guest Log: Copied input files into RunAtlas.
2025-07-27 02:40:37 (7776): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 02:40:38 (7776): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 02:40:38 (7776): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 02:40:38 (7776): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 02:40:57 (7776): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 02:40:57 (7776): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 02:40:57 (7776): Guest Log: 2.6.3.0 1590 0 30156 148783 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 02:41:02 (7776): Guest Log: copied the webapp to /var/www
2025-07-27 02:41:02 (7776): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-27 02:41:02 (7776): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-27 02:41:03 (7776): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 02:41:03 (7776): Guest Log:  *** Starting ATLAS job. (PandaID=6744938460 taskID=45743349) ***
2025-07-27 04:20:09 (7776): Status Report: Elapsed Time: '6000.000000'
2025-07-27 04:20:09 (7776): Status Report: CPU Time: '21187.375000'
2025-07-27 04:31:13 (7776): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 04:34:14 (7776): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 05:42:17 (7776): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 05:49:29 (7776): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 06:10:38 (7776): Status Report: Elapsed Time: '12000.883059'
2025-07-27 06:10:38 (7776): Status Report: CPU Time: '44764.406250'
2025-07-27 07:07:45 (7776): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 07:18:15 (7776): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 08:01:17 (7776): Status Report: Elapsed Time: '18000.883059'
2025-07-27 08:01:17 (7776): Status Report: CPU Time: '68440.187500'
2025-07-27 09:41:24 (7776): Status Report: Elapsed Time: '24000.883059'
2025-07-27 09:41:24 (7776): Status Report: CPU Time: '92076.125000'
2025-07-27 10:19:55 (7776): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 10:26:44 (7776): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 11:28:25 (7776): Status Report: Elapsed Time: '30000.883059'
2025-07-27 11:28:25 (7776): Status Report: CPU Time: '115699.781250'
2025-07-27 12:19:45 (7776): Guest Log:  *** Job finished ***
2025-07-27 12:19:45 (7776): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:37,454 | INFO     | all workflow threads have been joined
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:37,454 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:37,454 | INFO     | traces error code: 0
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:37,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,483 | INFO     | PID=5910 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,484 | INFO     | found 0 job(s) in 20 queues
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,484 | INFO     | [monitor] control thread has ended
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,591 [wrapper] ==== pilot stdout END ====
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,600 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,605 [wrapper] pilotpid: 5910
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,611 [wrapper] Pilot exit status: 0
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,717 [wrapper] pandaids: 6744938460
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,760 [wrapper] cleanup supervisor_pilot  3905 5911
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,771 [wrapper] Test setup, not cleaning
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,778 [wrapper] apfmon messages muted
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,784 [wrapper] ==== wrapper stdout END ====
2025-07-27 12:19:45 (7776): Guest Log: 2025-07-27 02:12:57,793 [wrapper] ==== wrapper stderr END ====
2025-07-27 12:19:45 (7776): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 12:19:45 (7776): Guest Log:     "exeErrorCode": 0,
2025-07-27 12:19:45 (7776): Guest Log:     "exeErrorDiag": "",
2025-07-27 12:19:45 (7776): Guest Log:     "pilotErrorCode": 0,
2025-07-27 12:19:45 (7776): Guest Log:     "pilotErrorDiag": "",
2025-07-27 12:19:45 (7776): Guest Log:  *** Listing of results directory ***
2025-07-27 12:19:45 (7776): Guest Log: total 215768
2025-07-27 12:19:45 (7776): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 24 22:31 pilot3.tar.gz
2025-07-27 12:19:45 (7776): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 24 22:55 runpilot2-wrapper.sh
2025-07-27 12:19:45 (7776): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 24 22:55 queuedata.json
2025-07-27 12:19:45 (7776): Guest Log: -rwxr-xr-x. 1 atlas atlas     11353 Jul 26 16:40 init_data.xml
2025-07-27 12:19:45 (7776): Guest Log: -rwxr-xr-x. 1 atlas atlas    542895 Jul 26 16:40 input.tar.gz
2025-07-27 12:19:45 (7776): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 26 16:40 start_atlas.sh
2025-07-27 12:19:45 (7776): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 26 16:40 EVNT.45743347._000656.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 12:19:45 (7776): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Jul 26 16:41 pandaJob.out
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas    980117 Jul 26 16:42 agis_schedconf.cvmfs.json
2025-07-27 12:19:45 (7776): Guest Log: drwx------. 4 atlas atlas      4096 Jul 26 16:42 pilot3
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas 210846790 Jul 27 02:11 HITS.45743349._012203.pool.root.1
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas      1031 Jul 27 02:12 memory_monitor_summary.json
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 02:12 agis_ddmendpoints.agis.ALL.json
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas    495611 Jul 27 02:12 log.45743349._012203.job.log.tgz.1
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas      7794 Jul 27 02:12 heartbeat.json
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas        97 Jul 27 02:12 pilot_heartbeat.json
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas       744 Jul 27 02:12 pilotlog.txt
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas   2651606 Jul 27 02:12 log.45743349._012203.job.log.1
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 02:12 output.list
2025-07-27 12:19:45 (7776): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 02:12 runtime_log
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas   3164160 Jul 27 02:12 result.tar.gz
2025-07-27 12:19:45 (7776): Guest Log: -rw-r--r--. 1 atlas atlas      8587 Jul 27 02:12 runtime_log.err
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas       660 Jul 27 02:12 oBPMDmu1Jz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmC3xKDmr6ARhn.diag
2025-07-27 12:19:45 (7776): Guest Log: Looking for outputfile HITS.45743349._012203.pool.root.1
2025-07-27 12:19:45 (7776): Guest Log: HITS file was successfully produced
2025-07-27 12:19:45 (7776): Guest Log: -rw-------. 1 atlas atlas 210846790 Jul 27 02:11 /home/atlas/RunAtlas/HITS.45743349._012203.pool.root.1
2025-07-27 12:19:47 (7776): Guest Log: Successfully finished the ATLAS job!
2025-07-27 12:19:47 (7776): Guest Log: Copying the results back to the shared directory!
2025-07-27 12:19:47 (7776): Guest Log:  *** Contents of shared directory: ***
2025-07-27 12:19:47 (7776): Guest Log: total 435052
2025-07-27 12:19:47 (7776): Guest Log: -rwxrwxrwx. 1 root root 230901527 Jul 26 16:39 ATLAS.root_0
2025-07-27 12:19:47 (7776): Guest Log: -rwxrwxrwx. 1 root root 210846790 Jul 27  2025 HITS.pool.root.1
2025-07-27 12:19:47 (7776): Guest Log: -rwxrwxrwx. 1 root root     11353 Jul 26 16:39 init_data.xml
2025-07-27 12:19:47 (7776): Guest Log: -rwxrwxrwx. 1 root root    542895 Jul 25 05:02 input.tar.gz
2025-07-27 12:19:47 (7776): Guest Log: -rwxrwxrwx. 1 root root   3164160 Jul 27  2025 result.tar.gz
2025-07-27 12:19:47 (7776): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 25 05:02 start_atlas.sh
2025-07-27 12:19:47 (7776): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 12:19:47 (7776): VM Completion File Detected.
2025-07-27 12:19:47 (7776): Powering off VM.
2025-07-27 12:19:48 (7776): Successfully stopped VM.
2025-07-27 12:19:48 (7776): Deregistering VM. (boinc_d1f9dffe3fb9fcc3, slot#0)
2025-07-27 12:19:48 (7776): Removing network bandwidth throttle group from VM.
2025-07-27 12:19:48 (7776): Removing VM from VirtualBox.
12:19:54 (7776): called boinc_finish(0)

</stderr_txt>
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