Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 09:19:42 (95034): Detected: vboxwrapper 26206
2025-07-25 09:19:42 (95034): Detected: BOINC client v8.2.4
2025-07-25 09:19:42 (95034): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-07-25 09:19:42 (95034): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 09:19:42 (95034): Create VM. (boinc_82d31f87f50f89f7, slot#2)
2025-07-25 09:19:42 (95034): Setting Memory Size for VM. (4800MB)
2025-07-25 09:19:42 (95034): Setting CPU Count for VM. (8)
2025-07-25 09:19:42 (95034): Setting Chipset Options for VM.
2025-07-25 09:19:42 (95034): Setting Graphics Controller Options for VM.
2025-07-25 09:19:43 (95034): Setting Boot Options for VM.
2025-07-25 09:19:43 (95034): Setting Network Configuration for NAT.
2025-07-25 09:19:43 (95034): Enabling VM Network Access.
2025-07-25 09:19:43 (95034): Disabling USB Support for VM.
2025-07-25 09:19:43 (95034): Disabling COM Port Support for VM.
2025-07-25 09:19:43 (95034): Disabling LPT Port Support for VM.
2025-07-25 09:19:43 (95034): Disabling Audio Support for VM.
2025-07-25 09:19:43 (95034): Disabling Clipboard Support for VM.
2025-07-25 09:19:43 (95034): Disabling Drag and Drop Support for VM.
2025-07-25 09:19:43 (95034): Adding storage controller(s) to VM.
2025-07-25 09:19:43 (95034): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 09:19:43 (95034): Adding VirtualBox Guest Additions to VM.
2025-07-25 09:19:44 (95034): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 09:19:44 (95034): forwarding host port 41353 to guest port 80
2025-07-25 09:19:44 (95034): Enabling remote desktop for VM.
2025-07-25 09:19:44 (95034): Required extension pack not installed, remote desktop not enabled.
2025-07-25 09:19:44 (95034): Enabling shared directory for VM.
2025-07-25 09:19:44 (95034): Starting VM using VBoxManage interface. (boinc_82d31f87f50f89f7, slot#2)
2025-07-25 09:19:45 (95034): Successfully started VM. (PID = '95522')
2025-07-25 09:19:45 (95034): Reporting VM Process ID to BOINC.
2025-07-25 09:19:45 (95034): Guest Log: BIOS: VirtualBox 7.1.12
2025-07-25 09:19:45 (95034): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 09:19:45 (95034): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 09:19:45 (95034): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 09:19:45 (95034): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 09:19:45 (95034): Detected: Web Application Enabled (http://localhost:41353)
2025-07-25 09:19:45 (95034): Preference change detected
2025-07-25 09:19:45 (95034): Setting CPU throttle for VM. (60%)
2025-07-25 09:19:45 (95034): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 09:19:47 (95034): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 09:19:47 (95034): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 09:19:50 (95034): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 09:19:50 (95034): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 09:19:50 (95034): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 09:20:01 (95034): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 09:20:01 (95034): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 09:20:10 (95034): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.000156 main     Log opened 2025-07-25T07:20:08.381442000Z
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.000249 main     OS Product: Linux
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.000269 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.000286 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.000302 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.000302 main     Process ID: 1375
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.000303 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 09:20:10 (95034): Guest Log: 00:00:00.001884 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 09:20:10 (95034): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 09:20:10 (95034): Guest Log: [INFO] Mounting shared directory
2025-07-25 09:20:11 (95034): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 09:20:22 (95034): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 09:20:22 (95034): Guest Log: [INFO] Detected branch: prod
2025-07-25 09:20:24 (95034): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 09:20:24 (95034): Guest Log: Copying input files
2025-07-25 09:20:28 (95034): Guest Log: Copied input files into RunAtlas.
2025-07-25 09:20:28 (95034): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 09:20:28 (95034): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 09:20:28 (95034): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 09:20:28 (95034): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 09:20:38 (95034): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 09:20:38 (95034): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 09:20:38 (95034): Guest Log: 2.6.3.0 1655 0 32228 148731 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 09:20:39 (95034): Guest Log: copied the webapp to /var/www
2025-07-25 09:20:40 (95034): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-25 09:20:40 (95034): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-25 09:20:40 (95034): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 09:20:40 (95034): Guest Log:  *** Starting ATLAS job. (PandaID=6741693427 taskID=45697541) ***
2025-07-25 10:58:46 (95034): Status Report: Elapsed Time: '6000.000000'
2025-07-25 10:58:46 (95034): Status Report: CPU Time: '22677.870000'
2025-07-25 12:37:47 (95034): Status Report: Elapsed Time: '12000.000000'
2025-07-25 12:37:47 (95034): Status Report: CPU Time: '51578.750000'
2025-07-25 13:35:13 (95034): Guest Log:  *** Job finished ***
2025-07-25 13:35:13 (95034): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:02,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:03,526 | INFO     | [job] queue monitor thread has finished
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:06,355 | INFO     | [data] queue_monitor thread has finished
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:06,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864934156096)>', '<ExcThread(monitor, started 139864158742272)>']
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:07,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:07,609 | INFO     | [monitor] control thread has ended
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,668 | INFO     | all workflow threads have been joined
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,668 | INFO     | end of generic workflow (traces error code: 0)
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,668 | INFO     | traces error code: 0
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,805 [wrapper] ==== pilot stdout END ====
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,816 [wrapper] ==== wrapper stdout RESUME ====
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,832 [wrapper] pilotpid: 6038
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:11,841 [wrapper] Pilot exit status: 0
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:12,420 [wrapper] pandaids: 6741693427
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:12,502 [wrapper] cleanup supervisor_pilot 12303 6039
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:12,510 [wrapper] Test setup, not cleaning
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:12,519 [wrapper] apfmon messages muted
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:12,527 [wrapper] ==== wrapper stdout END ====
2025-07-25 13:35:13 (95034): Guest Log: 2025-07-25 11:35:12,533 [wrapper] ==== wrapper stderr END ====
2025-07-25 13:35:13 (95034): Guest Log:  *** Error codes and diagnostics ***
2025-07-25 13:35:13 (95034): Guest Log:     "exeErrorCode": 0,
2025-07-25 13:35:13 (95034): Guest Log:     "exeErrorDiag": "",
2025-07-25 13:35:13 (95034): Guest Log:     "pilotErrorCode": 0,
2025-07-25 13:35:13 (95034): Guest Log:     "pilotErrorDiag": "",
2025-07-25 13:35:13 (95034): Guest Log:  *** Listing of results directory ***
2025-07-25 13:35:13 (95034): Guest Log: total 305044
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 21 21:54 queuedata.json
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 21 21:55 pilot3.tar.gz
2025-07-25 13:35:13 (95034): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 21 21:55 runpilot2-wrapper.sh
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas      9415 Jul 25 07:20 init_data.xml
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas    542893 Jul 25 07:20 input.tar.gz
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 25 07:20 start_atlas.sh
2025-07-25 13:35:13 (95034): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 25 07:20 EVNT.45697539._000032.pool.root.1 -> /data/./ATLAS.root_0
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas      2588 Jul 25 07:20 pandaJob.out
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas    979709 Jul 25 07:23 agis_schedconf.cvmfs.json
2025-07-25 13:35:13 (95034): Guest Log: drwx------. 4 atlas atlas      4096 Jul 25 07:23 pilot3
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas 305744205 Jul 25 11:33 HITS.45697541._000793.pool.root.1
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas        96 Jul 25 11:34 pilot_heartbeat.json
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas      1022 Jul 25 11:34 memory_monitor_summary.json
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 25 11:34 agis_ddmendpoints.agis.ALL.json
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas    381184 Jul 25 11:34 log.45697541._000793.job.log.tgz.1
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas      7760 Jul 25 11:34 heartbeat.json
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 25 11:35 pilotlog.txt
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas   1022943 Jul 25 11:35 log.45697541._000793.job.log.1
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas       357 Jul 25 11:35 output.list
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 25 11:35 runtime_log
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas   1423360 Jul 25 11:35 result.tar.gz
2025-07-25 13:35:13 (95034): Guest Log: -rw-r--r--. 1 atlas atlas      8641 Jul 25 11:35 runtime_log.err
2025-07-25 13:35:13 (95034): Guest Log: -rw-------. 1 atlas atlas       678 Jul 25 11:35 nkwLDmjeDy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlwGLDmWnw8en.diag
2025-07-25 13:35:14 (95034): Guest Log: Looking for outputfile HITS.45697541._000793.pool.root.1
2025-07-25 13:35:14 (95034): Guest Log: HITS file was successfully produced
2025-07-25 13:35:14 (95034): Guest Log: -rw-------. 1 atlas atlas 305744205 Jul 25 11:33 /home/atlas/RunAtlas/HITS.45697541._000793.pool.root.1
2025-07-25 13:35:14 (95034): Guest Log: Successfully finished the ATLAS job!
2025-07-25 13:35:14 (95034): Guest Log: Copying the results back to the shared directory!
2025-07-25 13:35:14 (95034): Guest Log:  *** Contents of shared directory: ***
2025-07-25 13:35:14 (95034): Guest Log: total 340004
2025-07-25 13:35:14 (95034): Guest Log: -rw-r--r--. 1 root root 346158439 Jul 25 07:19 ATLAS.root_0
2025-07-25 13:35:14 (95034): Guest Log: -rw-r--r--. 1 root root      9415 Jul 25 07:19 init_data.xml
2025-07-25 13:35:14 (95034): Guest Log: -rw-r--r--. 1 root root    542893 Jul 25 07:19 input.tar.gz
2025-07-25 13:35:14 (95034): Guest Log: -rw-r--r--. 1 root root   1423360 Jul 25 11:35 result.tar.gz
2025-07-25 13:35:14 (95034): Guest Log: -rw-r--r--. 1 root root     15095 Jul 25 07:19 start_atlas.sh
2025-07-25 13:35:14 (95034): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-25 13:35:14 (95034): VM Completion File Detected.
2025-07-25 13:35:14 (95034): Powering off VM.
2025-07-25 13:35:14 (95034): Successfully stopped VM.
2025-07-25 13:35:14 (95034): Deregistering VM. (boinc_82d31f87f50f89f7, slot#2)
2025-07-25 13:35:14 (95034): Removing network bandwidth throttle group from VM.
2025-07-25 13:35:14 (95034): Removing VM from VirtualBox.
13:35:19 (95034): called boinc_finish(0)

</stderr_txt>
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