Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:33:44 (710246): wrapper (7.7.26015): starting
21:33:44 (710246): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 21:33:44] Arguments: --nthreads 8
[2025-07-24 21:33:44] Threads: 8
[2025-07-24 21:33:44] Checking for CVMFS
[2025-07-24 21:33:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 21:33:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 21:33:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 21:33:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 21:33:44] 2.11.3.0 22717 475531 204580 148727 1 269 36672467 45568000 14507 130560 0 2504528033 99.764 1949811207 20990 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-24 21:33:44] CVMFS is ok
[2025-07-24 21:33:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 21:33:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 21:33:44] Further information can be found at the LHC@home message board.
[2025-07-24 21:33:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 21:33:44] Checking for apptainer binary...
[2025-07-24 21:33:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 21:33:44] Running /usr/bin/apptainer --version
[2025-07-24 21:33:44] apptainer version 1.3.3-1.el9
[2025-07-24 21:33:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 21:33:44] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0017.triumf.lcg
[2025-07-24 21:33:44] apptainer works
[2025-07-24 21:33:44] Set ATHENA_PROC_NUMBER=8
[2025-07-24 21:33:44] Set ATHENA_CORE_NUMBER=8
[2025-07-24 21:33:45] Starting ATLAS job with PandaID=6744945339
[2025-07-24 21:33:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 21:38:00]  *** The last 200 lines of the pilot log: ***
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | WARNING  | wrong length of table data, x=[1753418098.0], y=[942.0] (must be same and length>=4)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | ..............................
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | . Timing measurements:
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . get job = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . initial setup = 4 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . payload setup = 16 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . stage-in = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . payload execution = 29 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . stage-out = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . log creation = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | ..............................
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744945339/pilotlog.txt
[2025-07-24 21:38:00] 2025-07-25 04:37:25,520 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 21:38:00] - Log from pilotlog.txt -
[2025-07-24 21:38:00] 2025-07-25 04:37:25,503 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6744945339/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | INFO     | extracted standard info from prmon json
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | WARNING  | wrong length of table data, x=[1753418098.0], y=[942.0] (must be same and length>=4)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | ..............................
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | . Timing measurements:
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . get job = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . initial setup = 4 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . payload setup = 16 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . stage-in = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . payload execution = 29 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . stage-out = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . log creation = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | ..............................
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744945339/pilotlog.txt
[2025-07-24 21:38:00] 2025-07-25 04:37:25,520 | WARNING  | 
[2025-07-24 21:38:00] [begin log extracts]
[2025-07-24 21:38:00] - Log from pilotlog.txt -
[2025-07-24 21:38:00] 2025-07-25 04:37:25,503 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6744945339/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | INFO     | extracted standard info from prmon json
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 21:38:00] 2025-07-25 04:37:25,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | WARNING  | wrong length of table data, x=[1753418098.0], y=[942.0] (must be same and length>=4)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | ..............................
[2025-07-24 21:38:00] 2025-07-25 04:37:25,505 | INFO     | . Timing measurements:
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . get job = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . initial setup = 4 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . payload setup = 16 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . stage-in = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . payload execution = 29 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . stage-out = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | . log creation = 0 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | ..............................
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 21:38:00] 2025-07-25 04:37:25,506 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744945339/pilotlog.txt
[2025-07-24 21:38:00] [end log extracts]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,521 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,521 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 21:38:00] 2025-07-25 04:37:25,745 | INFO     | 
[2025-07-24 21:38:00] 2025-07-25 04:37:25,745 | INFO     | job summary report
[2025-07-24 21:38:00] 2025-07-25 04:37:25,745 | INFO     | --------------------------------------------------
[2025-07-24 21:38:00] 2025-07-25 04:37:25,745 | INFO     | PanDA job id: 6744945339
[2025-07-24 21:38:00] 2025-07-25 04:37:25,745 | INFO     | task id: 45743349
[2025-07-24 21:38:00] 2025-07-25 04:37:25,745 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 21:35:12,594 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | pilot state: failed 
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | transexitcode: 65
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | exeerrorcode: 65
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | exitcode: 65
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | cpuconsumptiontime: 16 s
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | nevents: 0
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | neventsw: 0
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | pid: 720148
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | pgrp: 720148
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | corecount: 8
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | event service: False
[2025-07-24 21:38:00] 2025-07-25 04:37:25,746 | INFO     | sizes: {0: 2397297, 1: 2397496, 10: 2397758, 12: 2397786, 49: 2421030, 50: 2425454, 175: 2425652}
[2025-07-24 21:38:00] 2025-07-25 04:37:25,747 | INFO     | --------------------------------------------------
[2025-07-24 21:38:00] 2025-07-25 04:37:25,747 | INFO     | 
[2025-07-24 21:38:00] 2025-07-25 04:37:25,747 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 21:38:00] 2025-07-25 04:37:25,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,761 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 21:38:00] 2025-07-25 04:37:25,763 | INFO     | job 6744945339 has completed (purged errors)
[2025-07-24 21:38:00] 2025-07-25 04:37:25,763 | INFO     | overall cleanup function is called
[2025-07-24 21:38:00] 2025-07-25 04:37:26,770 | INFO     | --- collectZombieJob: --- 10, [720148]
[2025-07-24 21:38:00] 2025-07-25 04:37:26,770 | INFO     | zombie collector waiting for pid 720148
[2025-07-24 21:38:00] 2025-07-25 04:37:26,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 21:38:00] 2025-07-25 04:37:26,770 | INFO     | collected zombie processes
[2025-07-24 21:38:00] 2025-07-25 04:37:26,770 | INFO     | will attempt to kill all subprocesses of pid=720148
[2025-07-24 21:38:00] 2025-07-25 04:37:27,080 | INFO     | process IDs to be killed: [720148] (in reverse order)
[2025-07-24 21:38:00] 2025-07-25 04:37:27,152 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 21:38:00] 2025-07-25 04:37:27,152 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 21:38:00] 2025-07-25 04:37:27,175 | INFO     | did not find any defunct processes belonging to 720148
[2025-07-24 21:38:00] 2025-07-25 04:37:27,182 | INFO     | did not find any defunct processes belonging to 720148
[2025-07-24 21:38:00] 2025-07-25 04:37:27,182 | INFO     | ready for new job
[2025-07-24 21:38:00] 2025-07-25 04:37:27,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 21:38:00] 2025-07-25 04:37:27,183 | INFO     | ***************************************
[2025-07-24 21:38:00] 2025-07-25 04:37:27,184 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 21:38:00] 2025-07-25 04:37:27,184 | INFO     | ***************************************
[2025-07-24 21:38:00] 2025-07-25 04:37:27,184 | INFO     | 
[2025-07-24 21:38:00] 2025-07-25 04:37:27,198 | INFO     | architecture information:
[2025-07-24 21:38:00] 2025-07-25 04:37:27,199 | INFO     | executing command: cat /etc/os-release
[2025-07-24 21:38:00] 2025-07-25 04:37:27,210 | INFO     | cat /etc/os-release:
[2025-07-24 21:38:00] NAME="CentOS Linux"
[2025-07-24 21:38:00] VERSION="7 (Core)"
[2025-07-24 21:38:00] ID="centos"
[2025-07-24 21:38:00] ID_LIKE="rhel fedora"
[2025-07-24 21:38:00] VERSION_ID="7"
[2025-07-24 21:38:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 21:38:00] ANSI_COLOR="0;31"
[2025-07-24 21:38:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 21:38:00] HOME_URL="https://www.centos.org/"
[2025-07-24 21:38:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 21:38:00] 
[2025-07-24 21:38:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 21:38:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 21:38:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 21:38:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 21:38:00] 
[2025-07-24 21:38:00] 2025-07-25 04:37:27,211 | INFO     | ***************************************
[2025-07-24 21:38:00] 2025-07-25 04:37:27,726 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 21:38:00] 2025-07-25 04:37:27,828 | INFO     | sufficient remaining disk space (1252845944832 B)
[2025-07-24 21:38:00] 2025-07-25 04:37:27,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 21:38:00] 2025-07-25 04:37:27,829 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 21:38:00] 2025-07-25 04:37:27,829 | INFO     | update_server=False
[2025-07-24 21:38:00] 2025-07-25 04:37:27,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 21:38:00] 2025-07-25 04:37:27,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 21:38:00] 2025-07-25 04:37:28,020 | INFO     | all data control threads have been joined
[2025-07-24 21:38:00] 2025-07-25 04:37:28,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:38:00] 2025-07-25 04:37:28,481 | INFO     | aborting loop
[2025-07-24 21:38:00] 2025-07-25 04:37:28,699 | INFO     | all payload control threads have been joined
[2025-07-24 21:38:00] 2025-07-25 04:37:28,835 | INFO     | [job] retrieve thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:28,977 | INFO     | all job control threads have been joined
[2025-07-24 21:38:00] 2025-07-25 04:37:28,977 | INFO     | [payload] failed_post thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,026 | INFO     | [data] control thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,079 | INFO     | [job] validate thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 21:38:00] 2025-07-25 04:37:29,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,373 | INFO     | [data] copytool_in thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,482 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,487 | INFO     | [job] job monitor thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,721 | INFO     | [payload] control thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,773 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,849 | INFO     | [data] copytool_out thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:29,987 | INFO     | [job] control thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:30,021 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:30,070 | INFO     | [payload] validate_post thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:30,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:38:00] 2025-07-25 04:37:31,765 | INFO     | [job] queue monitor thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:33,192 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 21:38:00] 2025-07-25 04:37:35,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488127199040)>', '<ExcThread(monitor, started 140487365224192)>']
[2025-07-24 21:38:00] 2025-07-25 04:37:40,116 | INFO     | all workflow threads have been joined
[2025-07-24 21:38:00] 2025-07-25 04:37:40,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 21:38:00] 2025-07-25 04:37:40,117 | INFO     | traces error code: 0
[2025-07-24 21:38:00] 2025-07-25 04:37:40,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 21:38:00] 2025-07-25 04:37:59,194 | INFO     | PID=713829 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 21:38:00] 2025-07-25 04:37:59,194 | INFO     | .. there are 26 such processes running
[2025-07-24 21:38:00] 2025-07-25 04:37:59,194 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 21:38:00] 2025-07-25 04:37:59,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 21:38:00] 2025-07-25 04:37:59,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 21:38:00] 2025-07-25 04:37:59,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 21:38:00] 2025-07-25 04:37:59,194 | INFO     | [monitor] control thread has ended
[2025-07-24 21:38:00] 2025-07-25 04:37:59,309 [wrapper] ==== pilot stdout END ====
[2025-07-24 21:38:00] 2025-07-25 04:37:59,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 21:38:00] 2025-07-25 04:37:59,338 [wrapper] pilotpid: 713829
[2025-07-24 21:38:00] 2025-07-25 04:37:59,345 [wrapper] Pilot exit status: 0
[2025-07-24 21:38:00] 2025-07-25 04:37:59,434 [wrapper] pandaids: 6744945339
[2025-07-24 21:38:00] 2025-07-25 04:37:59,717 [wrapper] cleanup supervisor_pilot  713835 713830
[2025-07-24 21:38:00] 2025-07-25 04:37:59,749 [wrapper] Test setup, not cleaning
[2025-07-24 21:38:00] 2025-07-25 04:37:59,775 [wrapper] apfmon messages muted
[2025-07-24 21:38:00] 2025-07-25 04:37:59,809 [wrapper] ==== wrapper stdout END ====
[2025-07-24 21:38:00] 2025-07-25 04:37:59,838 [wrapper] ==== wrapper stderr END ====
[2025-07-24 21:38:00]  *** Error codes and diagnostics ***
[2025-07-24 21:38:00]     "exeErrorCode": 65,
[2025-07-24 21:38:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 21:38:00]     "pilotErrorCode": 1305,
[2025-07-24 21:38:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 21:38:00]  *** Listing of results directory ***
[2025-07-24 21:38:00] total 145496
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc    530466 Jul 24 18:09 pilot3.tar.gz
[2025-07-24 21:38:00] -rwx------. 1 boinc boinc     36292 Jul 24 18:20 runpilot2-wrapper.sh
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc      5112 Jul 24 18:20 queuedata.json
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc       100 Jul 24 21:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 21:38:00] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 21:33 run_atlas
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc       105 Jul 24 21:33 job.xml
[2025-07-24 21:38:00] -rw-r--r--. 2 boinc boinc 144919157 Jul 24 21:33 EVNT.45743347._000775.pool.root.1
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc      6448 Jul 24 21:33 init_data.xml
[2025-07-24 21:38:00] -rw-r--r--. 2 boinc boinc     15095 Jul 24 21:33 start_atlas.sh
[2025-07-24 21:38:00] drwxrwx--x. 2 boinc boinc      4096 Jul 24 21:33 shared
[2025-07-24 21:38:00] -rw-r--r--. 2 boinc boinc    542884 Jul 24 21:33 input.tar.gz
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc         0 Jul 24 21:33 boinc_lockfile
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc      2561 Jul 24 21:33 pandaJob.out
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc    979701 Jul 24 21:34 agis_schedconf.cvmfs.json
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc   1593052 Jul 24 21:34 agis_ddmendpoints.agis.ALL.json
[2025-07-24 21:38:00] drwx------. 4 boinc boinc      4096 Jul 24 21:34 pilot3
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc       522 Jul 24 21:35 boinc_task_state.xml
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc       948 Jul 24 21:35 memory_monitor_summary.json
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc     20811 Jul 24 21:35 log.45743349._014104.job.log.tgz.1
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc        95 Jul 24 21:37 pilot_heartbeat.json
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc      8390 Jul 24 21:37 heartbeat.json
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc      8192 Jul 24 21:37 boinc_mmap_file
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc        22 Jul 24 21:37 wrapper_checkpoint.txt
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc       822 Jul 24 21:37 pilotlog.txt
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc     77131 Jul 24 21:37 log.45743349._014104.job.log.1
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc       188 Jul 24 21:38 output.list
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc       620 Jul 24 21:38 runtime_log
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc    112640 Jul 24 21:38 result.tar.gz
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc      8648 Jul 24 21:38 runtime_log.err
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc       645 Jul 24 21:38 khaMDm9HMz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOOOLDmA4DEFn.diag
[2025-07-24 21:38:00] -rw-r--r--. 1 boinc boinc     21939 Jul 24 21:38 stderr.txt
[2025-07-24 21:38:00] No HITS result produced
[2025-07-24 21:38:00]  *** Contents of shared directory: ***
[2025-07-24 21:38:00] total 142188
[2025-07-24 21:38:00] -rw-r--r--. 2 boinc boinc 144919157 Jul 24 21:33 ATLAS.root_0
[2025-07-24 21:38:00] -rw-r--r--. 2 boinc boinc     15095 Jul 24 21:33 start_atlas.sh
[2025-07-24 21:38:00] -rw-r--r--. 2 boinc boinc    542884 Jul 24 21:33 input.tar.gz
[2025-07-24 21:38:00] -rw-------. 1 boinc boinc    112640 Jul 24 21:38 result.tar.gz
21:38:01 (710246): run_atlas exited; CPU time 23.991903
21:38:01 (710246): called boinc_finish(0)

</stderr_txt>
]]>

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