Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:07:32 (16249): wrapper (7.7.26015): starting
23:07:32 (16249): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 23:07:32] Arguments: --nthreads 8
[2025-07-24 23:07:32] Threads: 8
[2025-07-24 23:07:32] Checking for CVMFS
[2025-07-24 23:07:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 23:07:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 23:07:32] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 23:07:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 23:07:32] 2.11.2.0 1598 101882 114680 148723 3 59 19175195 20275200 917 130560 0 67311902 99.985 8068388 9176 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 23:07:32] CVMFS is ok
[2025-07-24 23:07:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 23:07:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 23:07:32] Further information can be found at the LHC@home message board.
[2025-07-24 23:07:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 23:07:32] Checking for apptainer binary...
[2025-07-24 23:07:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 23:07:32] Running /usr/bin/apptainer --version
[2025-07-24 23:07:32] apptainer version 1.3.2-1.el7
[2025-07-24 23:07:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 23:07:33] c-205-36.aglt2.org
[2025-07-24 23:07:33] apptainer works
[2025-07-24 23:07:33] Set ATHENA_PROC_NUMBER=8
[2025-07-24 23:07:33] Set ATHENA_CORE_NUMBER=8
[2025-07-24 23:07:33] Starting ATLAS job with PandaID=6744925752
[2025-07-24 23:07:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 00:24:02]  *** The last 200 lines of the pilot log: ***
[2025-07-25 00:24:02]  mtime=0
[2025-07-25 00:24:02]  protocol_id=None
[2025-07-25 00:24:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 00:24:02]  replicas=None
[2025-07-25 00:24:02]  scope=mc23_13p6TeV
[2025-07-25 00:24:02]  status=None
[2025-07-25 00:24:02]  status_code=0
[2025-07-25 00:24:02]  storage_token=
[2025-07-25 00:24:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744925752/log.45743349._007570.job.log.tgz.1
[2025-07-25 00:24:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/5e/log.45743349._007570.job.log.tgz.1
[2025-07-25 00:24:02]  workdir=None
[2025-07-25 00:24:02] ]
[2025-07-25 00:24:02] 2025-07-25 04:23:23,294 | INFO     | transferring file log.45743349._007570.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744925752/log.45743349._007570.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-25 00:24:02] 2025-07-25 04:23:23,294 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744925752/log.45743349._007570.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._007570.job
[2025-07-25 00:24:02] 2025-07-25 04:23:23,311 | INFO     | adding to output.list: log.45743349._007570.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/5e/log.45743349._007570.job.log.tg
[2025-07-25 00:24:02] 2025-07-25 04:23:23,312 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 00:24:02] 2025-07-25 04:23:23,312 | INFO     | summary of transferred files:
[2025-07-25 00:24:02] 2025-07-25 04:23:23,313 | INFO     |  -- lfn=log.45743349._007570.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 00:24:02] 2025-07-25 04:23:23,313 | INFO     | stage-out finished correctly
[2025-07-25 00:24:02] 2025-07-25 04:23:24,308 | INFO     | monitor loop #338: job 0:6744925752 is in state 'finished'
[2025-07-25 00:24:02] 2025-07-25 04:23:24,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 00:24:02] 2025-07-25 04:23:25,448 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 00:24:02] 2025-07-25 04:23:25,536 | INFO     | job 6744925752 has state=finished
[2025-07-25 00:24:02] 2025-07-25 04:23:25,537 | INFO     | preparing for final server update for job 6744925752 in state='finished'
[2025-07-25 00:24:02] 2025-07-25 04:23:25,537 | INFO     | this job has now completed (state=finished)
[2025-07-25 00:24:02] 2025-07-25 04:23:25,537 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 00:24:02] 2025-07-25 04:23:25,538 | INFO     | log transfer has been attempted: DONE
[2025-07-25 00:24:02] 2025-07-25 04:23:25,538 | INFO     | job 6744925752 has finished - writing final server update
[2025-07-25 00:24:02] 2025-07-25 04:23:25,538 | INFO     | total number of processed events: 400 (read)
[2025-07-25 00:24:02] 2025-07-25 04:23:25,539 | INFO     | executing command: lscpu
[2025-07-25 00:24:02] 2025-07-25 04:23:25,571 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 00:24:02] 2025-07-25 04:23:26,812 | INFO     | monitor loop #339: job 0:6744925752 is in state 'finished'
[2025-07-25 00:24:02] 2025-07-25 04:23:26,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 00:24:02] 2025-07-25 04:23:27,453 | INFO     | PID=19858 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 00:24:02] 2025-07-25 04:23:27,453 | INFO     | .. there are 2 such processes running
[2025-07-25 00:24:02] 2025-07-25 04:23:29,315 | INFO     | monitor loop #340: job 0:6744925752 is in state 'finished'
[2025-07-25 00:24:02] 2025-07-25 04:23:29,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 00:24:02] 2025-07-25 04:23:30,117 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 00:24:02] 2025-07-25 04:23:30,121 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2046.8530625
[2025-07-25 00:24:02] 2025-07-25 04:23:30,125 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744925752/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 00:24:02] 2025-07-25 04:23:30,126 | INFO     | extracted standard info from prmon json
[2025-07-25 00:24:02] 2025-07-25 04:23:30,126 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 00:24:02] 2025-07-25 04:23:30,126 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 00:24:02] 2025-07-25 04:23:30,126 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 00:24:02] 2025-07-25 04:23:30,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 00:24:02] 2025-07-25 04:23:30,129 | INFO     | fitting pss+swap vs Time
[2025-07-25 00:24:02] 2025-07-25 04:23:30,129 | INFO     | sum of square deviations: 93240818.0
[2025-07-25 00:24:02] 2025-07-25 04:23:30,129 | INFO     | sum of deviations: 8784609.999999925
[2025-07-25 00:24:02] 2025-07-25 04:23:30,129 | INFO     | mean x: 1753415209.0
[2025-07-25 00:24:02] 2025-07-25 04:23:30,130 | INFO     | mean y: 2537275.7910447763
[2025-07-25 00:24:02] 2025-07-25 04:23:30,130 | INFO     | -- intersect: -162659352.78350678
[2025-07-25 00:24:02] 2025-07-25 04:23:30,130 | INFO     | intersect: -162659352.78350678
[2025-07-25 00:24:02] 2025-07-25 04:23:30,130 | INFO     | chi2: 0.0175281369073661
[2025-07-25 00:24:02] 2025-07-25 04:23:30,130 | INFO     | -- intersect: -162659352.78350678
[2025-07-25 00:24:02] 2025-07-25 04:23:30,130 | INFO     | current memory leak: 0.09 B/s (using 67 data points, chi2=0.02)
[2025-07-25 00:24:02] 2025-07-25 04:23:30,131 | INFO     | could have reported an average CPU frequency of 2241 MHz (6 samples)
[2025-07-25 00:24:02] 2025-07-25 04:23:30,131 | INFO     | ..............................
[2025-07-25 00:24:02] 2025-07-25 04:23:30,131 | INFO     | . Timing measurements:
[2025-07-25 00:24:02] 2025-07-25 04:23:30,131 | INFO     | . get job = 0 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,131 | INFO     | . initial setup = 2 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,131 | INFO     | . payload setup = 7 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,132 | INFO     | . stage-in = 0 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,132 | INFO     | . payload execution = 4511 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,132 | INFO     | . stage-out = 0 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,132 | INFO     | . log creation = 0 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,132 | INFO     | ..............................
[2025-07-25 00:24:02] 2025-07-25 04:23:30,334 | INFO     | 
[2025-07-25 00:24:02] 2025-07-25 04:23:30,334 | INFO     | job summary report
[2025-07-25 00:24:02] 2025-07-25 04:23:30,334 | INFO     | --------------------------------------------------
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | PanDA job id: 6744925752
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | task id: 45743349
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | errors: (none)
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | pilot state: finished 
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | transexitcode: 0
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | exeerrorcode: 0
[2025-07-25 00:24:02] 2025-07-25 04:23:30,335 | INFO     | exeerrordiag: 
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | exitcode: 0
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | exitmsg: OK
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | cpuconsumptiontime: 34078 s
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | nevents: 400
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | neventsw: 0
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | pid: 26323
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | pgrp: 26323
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | corecount: 8
[2025-07-25 00:24:02] 2025-07-25 04:23:30,336 | INFO     | event service: False
[2025-07-25 00:24:02] 2025-07-25 04:23:30,337 | INFO     | sizes: {0: 2397468, 5: 2397730, 11: 2397786, 4522: 2424029, 4524: 2433027, 4526: 2433083, 4531: 2433405}
[2025-07-25 00:24:02] 2025-07-25 04:23:30,337 | INFO     | --------------------------------------------------
[2025-07-25 00:24:02] 2025-07-25 04:23:30,337 | INFO     | 
[2025-07-25 00:24:02] 2025-07-25 04:23:30,337 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 00:24:02] 2025-07-25 04:23:30,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 00:24:02] 2025-07-25 04:23:30,361 | INFO     | job 6744925752 has completed (purged errors)
[2025-07-25 00:24:02] 2025-07-25 04:23:30,362 | INFO     | overall cleanup function is called
[2025-07-25 00:24:02] 2025-07-25 04:23:31,369 | INFO     | --- collectZombieJob: --- 10, [26323]
[2025-07-25 00:24:02] 2025-07-25 04:23:31,369 | INFO     | zombie collector waiting for pid 26323
[2025-07-25 00:24:02] 2025-07-25 04:23:31,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 00:24:02] 2025-07-25 04:23:31,370 | INFO     | collected zombie processes
[2025-07-25 00:24:02] 2025-07-25 04:23:31,370 | INFO     | will attempt to kill all subprocesses of pid=26323
[2025-07-25 00:24:02] 2025-07-25 04:23:31,502 | INFO     | process IDs to be killed: [26323] (in reverse order)
[2025-07-25 00:24:02] 2025-07-25 04:23:31,551 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 00:24:02] 2025-07-25 04:23:31,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 00:24:02] 2025-07-25 04:23:31,555 | INFO     | did not find any defunct processes belonging to 26323
[2025-07-25 00:24:02] 2025-07-25 04:23:31,559 | INFO     | did not find any defunct processes belonging to 26323
[2025-07-25 00:24:02] 2025-07-25 04:23:31,559 | INFO     | ready for new job
[2025-07-25 00:24:02] 2025-07-25 04:23:31,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 00:24:02] 2025-07-25 04:23:31,561 | INFO     | ***************************************
[2025-07-25 00:24:02] 2025-07-25 04:23:31,561 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 00:24:02] 2025-07-25 04:23:31,561 | INFO     | ***************************************
[2025-07-25 00:24:02] 2025-07-25 04:23:31,562 | INFO     | 
[2025-07-25 00:24:02] 2025-07-25 04:23:31,563 | INFO     | architecture information:
[2025-07-25 00:24:02] 2025-07-25 04:23:31,563 | INFO     | executing command: cat /etc/os-release
[2025-07-25 00:24:02] 2025-07-25 04:23:31,577 | INFO     | cat /etc/os-release:
[2025-07-25 00:24:02] NAME="CentOS Linux"
[2025-07-25 00:24:02] VERSION="7 (Core)"
[2025-07-25 00:24:02] ID="centos"
[2025-07-25 00:24:02] ID_LIKE="rhel fedora"
[2025-07-25 00:24:02] VERSION_ID="7"
[2025-07-25 00:24:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 00:24:02] ANSI_COLOR="0;31"
[2025-07-25 00:24:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 00:24:02] HOME_URL="https://www.centos.org/"
[2025-07-25 00:24:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 00:24:02] 
[2025-07-25 00:24:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 00:24:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 00:24:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 00:24:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 00:24:02] 
[2025-07-25 00:24:02] 2025-07-25 04:23:31,577 | INFO     | ***************************************
[2025-07-25 00:24:02] 2025-07-25 04:23:32,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 00:24:02] 2025-07-25 04:23:32,097 | INFO     | sufficient remaining disk space (32632733696 B)
[2025-07-25 00:24:02] 2025-07-25 04:23:32,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 00:24:02] 2025-07-25 04:23:32,098 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 00:24:02] 2025-07-25 04:23:32,098 | INFO     | update_server=False
[2025-07-25 00:24:02] 2025-07-25 04:23:32,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 00:24:02] 2025-07-25 04:23:32,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 00:24:02] 2025-07-25 04:23:32,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 00:24:02] 2025-07-25 04:23:32,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 00:24:02] 2025-07-25 04:23:32,554 | INFO     | all payload control threads have been joined
[2025-07-25 00:24:02] 2025-07-25 04:23:32,813 | INFO     | all job control threads have been joined
[2025-07-25 00:24:02] 2025-07-25 04:23:32,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 00:24:02] 2025-07-25 04:23:32,824 | INFO     | aborting loop
[2025-07-25 00:24:02] 2025-07-25 04:23:33,104 | INFO     | [job] retrieve thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,104 | INFO     | [job] queue monitor thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,119 | INFO     | all data control threads have been joined
[2025-07-25 00:24:02] 2025-07-25 04:23:33,164 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,334 | INFO     | [payload] failed_post thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,466 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,559 | INFO     | [payload] control thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,819 | INFO     | [job] control thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,830 | INFO     | [job] job monitor thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:33,881 | INFO     | [payload] validate_post thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:34,105 | INFO     | [data] copytool_out thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:34,124 | INFO     | [data] control thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:34,237 | INFO     | [job] validate thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:34,526 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:34,542 | INFO     | [data] copytool_in thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:34,546 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:36,106 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 00:24:02] 2025-07-25 04:23:37,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452278581056)>', '<ExcThread(monitor, started 140451839457024)>']
[2025-07-25 00:24:02] 2025-07-25 04:23:42,099 | INFO     | all workflow threads have been joined
[2025-07-25 00:24:02] 2025-07-25 04:23:42,100 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 00:24:02] 2025-07-25 04:23:42,101 | INFO     | traces error code: 0
[2025-07-25 00:24:02] 2025-07-25 04:23:42,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 00:24:02] 2025-07-25 04:24:01,692 | INFO     | PID=19858 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 00:24:02] 2025-07-25 04:24:01,692 | INFO     | .. there are 2 such processes running
[2025-07-25 00:24:02] 2025-07-25 04:24:01,693 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 00:24:02] 2025-07-25 04:24:01,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 00:24:02] 2025-07-25 04:24:01,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 00:24:02] 2025-07-25 04:24:01,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 00:24:02] 2025-07-25 04:24:01,693 | INFO     | [monitor] control thread has ended
[2025-07-25 00:24:02] 2025-07-25 04:24:01,812 [wrapper] ==== pilot stdout END ====
[2025-07-25 00:24:02] 2025-07-25 04:24:01,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 00:24:02] 2025-07-25 04:24:01,820 [wrapper] pilotpid: 19858
[2025-07-25 00:24:02] 2025-07-25 04:24:01,824 [wrapper] Pilot exit status: 0
[2025-07-25 00:24:02] 2025-07-25 04:24:01,835 [wrapper] pandaids: 6744925752
[2025-07-25 00:24:02] 2025-07-25 04:24:01,879 [wrapper] cleanup supervisor_pilot 10764 19859
[2025-07-25 00:24:02] 2025-07-25 04:24:01,883 [wrapper] Test setup, not cleaning
[2025-07-25 00:24:02] 2025-07-25 04:24:01,887 [wrapper] apfmon messages muted
[2025-07-25 00:24:02] 2025-07-25 04:24:01,891 [wrapper] ==== wrapper stdout END ====
[2025-07-25 00:24:02] 2025-07-25 04:24:01,894 [wrapper] ==== wrapper stderr END ====
[2025-07-25 00:24:02]  *** Error codes and diagnostics ***
[2025-07-25 00:24:02]     "exeErrorCode": 0,
[2025-07-25 00:24:02]     "exeErrorDiag": "",
[2025-07-25 00:24:02]     "pilotErrorCode": 0,
[2025-07-25 00:24:02]     "pilotErrorDiag": "",
[2025-07-25 00:24:02]  *** Listing of results directory ***
[2025-07-25 00:24:02] total 439464
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas    530466 Jul 24 15:13 pilot3.tar.gz
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas      5112 Jul 24 15:24 queuedata.json
[2025-07-25 00:24:02] -rwx------ 1 boincer umatlas     36292 Jul 24 15:25 runpilot2-wrapper.sh
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas       100 Jul 24 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 00:24:02] -rwxr-xr-x 1 boincer umatlas      7986 Jul 24 23:07 run_atlas
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas       105 Jul 24 23:07 job.xml
[2025-07-25 00:24:02] -rw-r--r-- 2 boincer umatlas 232596085 Jul 24 23:07 EVNT.45743347._000398.pool.root.1
[2025-07-25 00:24:02] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 23:07 start_atlas.sh
[2025-07-25 00:24:02] drwxrwx--x 2 boincer umatlas      4096 Jul 24 23:07 shared
[2025-07-25 00:24:02] -rw-r--r-- 2 boincer umatlas    542880 Jul 24 23:07 input.tar.gz
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas         0 Jul 24 23:07 boinc_lockfile
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas      2560 Jul 24 23:07 pandaJob.out
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas    979709 Jul 24 23:07 agis_schedconf.cvmfs.json
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas   1593052 Jul 24 23:07 agis_ddmendpoints.agis.ALL.json
[2025-07-25 00:24:02] drwx------ 4 boincer umatlas      4096 Jul 24 23:07 pilot3
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas      6048 Jul 25 00:22 init_data.xml
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas 212054214 Jul 25 00:22 HITS.45743349._007570.pool.root.1
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas       529 Jul 25 00:23 boinc_task_state.xml
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas      1047 Jul 25 00:23 memory_monitor_summary.json
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas    292223 Jul 25 00:23 log.45743349._007570.job.log.tgz.1
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas      7828 Jul 25 00:23 heartbeat.json
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 00:23 boinc_mmap_file
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas        27 Jul 25 00:23 wrapper_checkpoint.txt
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas        95 Jul 25 00:24 pilot_heartbeat.json
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas       820 Jul 25 00:24 pilotlog.txt
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas    451366 Jul 25 00:24 log.45743349._007570.job.log.1
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas       357 Jul 25 00:24 output.list
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas       620 Jul 25 00:24 runtime_log
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas    757760 Jul 25 00:24 result.tar.gz
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas       658 Jul 25 00:24 WnOLDmTkGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8KNLDmJqHgnn.diag
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas      8660 Jul 25 00:24 runtime_log.err
[2025-07-25 00:24:02] -rw-r--r-- 1 boincer umatlas     21780 Jul 25 00:24 stderr.txt
[2025-07-25 00:24:02] HITS file was successfully produced:
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas 212054214 Jul 25 00:22 shared/HITS.pool.root.1
[2025-07-25 00:24:02]  *** Contents of shared directory: ***
[2025-07-25 00:24:02] total 435528
[2025-07-25 00:24:02] -rw-r--r-- 2 boincer umatlas 232596085 Jul 24 23:07 ATLAS.root_0
[2025-07-25 00:24:02] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 23:07 start_atlas.sh
[2025-07-25 00:24:02] -rw-r--r-- 2 boincer umatlas    542880 Jul 24 23:07 input.tar.gz
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas 212054214 Jul 25 00:22 HITS.pool.root.1
[2025-07-25 00:24:02] -rw------- 1 boincer umatlas    757760 Jul 25 00:24 result.tar.gz
00:24:03 (16249): run_atlas exited; CPU time 34075.387152
00:24:03 (16249): called boinc_finish(0)

</stderr_txt>
]]>

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