Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:36 (3019379): wrapper (7.7.26015): starting
20:06:36 (3019379): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 20:06:36] Arguments: --nthreads 12
[2025-07-24 20:06:36] Threads: 12
[2025-07-24 20:06:36] Checking for CVMFS
[2025-07-24 20:06:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 20:06:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 20:06:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 20:06:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 20:06:37] 2.11.5.0 7128 33700 194784 148723 1 274 26139911 45568001 17928 130560 0 276453856 99.766 185377487 28776 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-24 20:06:37] CVMFS is ok
[2025-07-24 20:06:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 20:06:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 20:06:37] Further information can be found at the LHC@home message board.
[2025-07-24 20:06:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 20:06:37] Checking for apptainer binary...
[2025-07-24 20:06:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 20:06:37] Running /usr/bin/apptainer --version
[2025-07-24 20:06:37] apptainer version 1.4.1-1.el9
[2025-07-24 20:06:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 20:06:38] wns0063.triumf.lcg
[2025-07-24 20:06:38] apptainer works
[2025-07-24 20:06:38] Set ATHENA_PROC_NUMBER=12
[2025-07-24 20:06:38] Set ATHENA_CORE_NUMBER=12
[2025-07-24 20:06:38] Starting ATLAS job with PandaID=6744941709
[2025-07-24 20:06:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 20:11:35]  *** The last 200 lines of the pilot log: ***
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 20:11:35] 2025-07-25 03:11:01,463 | WARNING  | wrong length of table data, x=[1753412888.0], y=[1705.0] (must be same and length>=4)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,463 | INFO     | could have reported an average CPU frequency of 2634 MHz (4 samples)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | ..............................
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . Timing measurements:
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . get job = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . initial setup = 4 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . payload setup = 11 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . stage-in = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . payload execution = 44 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . stage-out = 1 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . log creation = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | ..............................
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744941709/pilotlog.txt
[2025-07-24 20:11:35] 2025-07-25 03:11:01,581 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 20:11:35] - Log from pilotlog.txt -
[2025-07-24 20:11:35] 2025-07-25 03:11:01,461 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6744941709/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | INFO     | extracted standard info from prmon json
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 20:11:35] 2025-07-25 03:11:01,463 | WARNING  | wrong length of table data, x=[1753412888.0], y=[1705.0] (must be same and length>=4)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,463 | INFO     | could have reported an average CPU frequency of 2634 MHz (4 samples)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | ..............................
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . Timing measurements:
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . get job = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . initial setup = 4 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . payload setup = 11 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . stage-in = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . payload execution = 44 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . stage-out = 1 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . log creation = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | ..............................
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744941709/pilotlog.txt
[2025-07-24 20:11:35] 2025-07-25 03:11:01,582 | WARNING  | 
[2025-07-24 20:11:35] [begin log extracts]
[2025-07-24 20:11:35] - Log from pilotlog.txt -
[2025-07-24 20:11:35] 2025-07-25 03:11:01,461 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6744941709/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | INFO     | extracted standard info from prmon json
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 20:11:35] 2025-07-25 03:11:01,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 20:11:35] 2025-07-25 03:11:01,463 | WARNING  | wrong length of table data, x=[1753412888.0], y=[1705.0] (must be same and length>=4)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,463 | INFO     | could have reported an average CPU frequency of 2634 MHz (4 samples)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | ..............................
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . Timing measurements:
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . get job = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . initial setup = 4 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . payload setup = 11 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . stage-in = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . payload execution = 44 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . stage-out = 1 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,464 | INFO     | . log creation = 0 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | ..............................
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 20:11:35] 2025-07-25 03:11:01,465 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744941709/pilotlog.txt
[2025-07-24 20:11:35] [end log extracts]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,582 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,583 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | 
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | job summary report
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | --------------------------------------------------
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | PanDA job id: 6744941709
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | task id: 45743349
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 20:08:31,287 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | pilot state: failed 
[2025-07-24 20:11:35] 2025-07-25 03:11:01,747 | INFO     | transexitcode: 65
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | exeerrorcode: 65
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | exitcode: 65
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | cpuconsumptiontime: 16 s
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | nevents: 0
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | neventsw: 0
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | pid: 3035854
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | pgrp: 3035854
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | corecount: 12
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | event service: False
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | sizes: {0: 2396645, 1: 2397498, 2: 2397526, 13: 2397526, 18: 2397844, 24: 2397872, 60: 2421258, 61: 2421234, 63: 2425554, 66: 2425582, 202: 2425748}
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | --------------------------------------------------
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | 
[2025-07-24 20:11:35] 2025-07-25 03:11:01,748 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 20:11:35] 2025-07-25 03:11:01,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 20:11:35] 2025-07-25 03:11:01,775 | INFO     | job 6744941709 has completed (purged errors)
[2025-07-24 20:11:35] 2025-07-25 03:11:01,775 | INFO     | overall cleanup function is called
[2025-07-24 20:11:35] 2025-07-25 03:11:02,782 | INFO     | --- collectZombieJob: --- 10, [3035854]
[2025-07-24 20:11:35] 2025-07-25 03:11:02,782 | INFO     | zombie collector waiting for pid 3035854
[2025-07-24 20:11:35] 2025-07-25 03:11:02,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 20:11:35] 2025-07-25 03:11:02,783 | INFO     | collected zombie processes
[2025-07-24 20:11:35] 2025-07-25 03:11:02,783 | INFO     | will attempt to kill all subprocesses of pid=3035854
[2025-07-24 20:11:35] 2025-07-25 03:11:03,765 | INFO     | process IDs to be killed: [3035854] (in reverse order)
[2025-07-24 20:11:35] 2025-07-25 03:11:04,186 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 20:11:35] 2025-07-25 03:11:04,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 20:11:35] 2025-07-25 03:11:04,235 | INFO     | did not find any defunct processes belonging to 3035854
[2025-07-24 20:11:35] 2025-07-25 03:11:04,281 | INFO     | did not find any defunct processes belonging to 3035854
[2025-07-24 20:11:35] 2025-07-25 03:11:04,281 | INFO     | ready for new job
[2025-07-24 20:11:35] 2025-07-25 03:11:04,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 20:11:35] 2025-07-25 03:11:04,302 | INFO     | ***************************************
[2025-07-24 20:11:35] 2025-07-25 03:11:04,303 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 20:11:35] 2025-07-25 03:11:04,303 | INFO     | ***************************************
[2025-07-24 20:11:35] 2025-07-25 03:11:04,303 | INFO     | 
[2025-07-24 20:11:35] 2025-07-25 03:11:04,305 | INFO     | architecture information:
[2025-07-24 20:11:35] 2025-07-25 03:11:04,323 | INFO     | executing command: cat /etc/os-release
[2025-07-24 20:11:35] 2025-07-25 03:11:04,392 | INFO     | cat /etc/os-release:
[2025-07-24 20:11:35] NAME="CentOS Linux"
[2025-07-24 20:11:35] VERSION="7 (Core)"
[2025-07-24 20:11:35] ID="centos"
[2025-07-24 20:11:35] ID_LIKE="rhel fedora"
[2025-07-24 20:11:35] VERSION_ID="7"
[2025-07-24 20:11:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 20:11:35] ANSI_COLOR="0;31"
[2025-07-24 20:11:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 20:11:35] HOME_URL="https://www.centos.org/"
[2025-07-24 20:11:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 20:11:35] 
[2025-07-24 20:11:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 20:11:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 20:11:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 20:11:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 20:11:35] 
[2025-07-24 20:11:35] 2025-07-25 03:11:04,393 | INFO     | ***************************************
[2025-07-24 20:11:35] 2025-07-25 03:11:04,898 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 20:11:35] 2025-07-25 03:11:04,946 | INFO     | sufficient remaining disk space (2041180061696 B)
[2025-07-24 20:11:35] 2025-07-25 03:11:04,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 20:11:35] 2025-07-25 03:11:04,947 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 20:11:35] 2025-07-25 03:11:04,947 | INFO     | update_server=False
[2025-07-24 20:11:35] 2025-07-25 03:11:04,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 20:11:35] 2025-07-25 03:11:04,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 20:11:35] 2025-07-25 03:11:04,947 | INFO     | aborting loop
[2025-07-24 20:11:35] 2025-07-25 03:11:05,378 | INFO     | all data control threads have been joined
[2025-07-24 20:11:35] 2025-07-25 03:11:05,953 | INFO     | [job] job monitor thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:05,954 | INFO     | [job] retrieve thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,031 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,081 | INFO     | [payload] validate_post thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,084 | INFO     | all job control threads have been joined
[2025-07-24 20:11:35] 2025-07-25 03:11:06,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 20:11:35] 2025-07-25 03:11:06,384 | INFO     | [data] control thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,392 | INFO     | all payload control threads have been joined
[2025-07-24 20:11:35] 2025-07-25 03:11:06,464 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,553 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,558 | INFO     | [data] copytool_in thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,559 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,676 | INFO     | [payload] failed_post thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:06,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 20:11:35] 2025-07-25 03:11:07,090 | INFO     | [job] control thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:07,398 | INFO     | [payload] control thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:07,412 | INFO     | [job] validate thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:07,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 20:11:35] 2025-07-25 03:11:07,778 | INFO     | [job] queue monitor thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:08,345 | INFO     | [data] copytool_out thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:11,548 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 20:11:35] 2025-07-25 03:11:12,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960140433216)>', '<ExcThread(monitor, started 139959604332288)>']
[2025-07-24 20:11:35] 2025-07-25 03:11:17,141 | INFO     | all workflow threads have been joined
[2025-07-24 20:11:35] 2025-07-25 03:11:17,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 20:11:35] 2025-07-25 03:11:17,142 | INFO     | traces error code: 0
[2025-07-24 20:11:35] 2025-07-25 03:11:17,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 20:11:35] 2025-07-25 03:11:34,014 | INFO     | PID=3024550 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 20:11:35] 2025-07-25 03:11:34,014 | INFO     | .. there are 28 such processes running
[2025-07-24 20:11:35] 2025-07-25 03:11:34,015 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 20:11:35] 2025-07-25 03:11:34,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 20:11:35] 2025-07-25 03:11:34,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 20:11:35] 2025-07-25 03:11:34,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 20:11:35] 2025-07-25 03:11:34,015 | CRITICAL | thread 'MainThread' is not alive
[2025-07-24 20:11:35] 2025-07-25 03:11:34,015 | INFO     | [monitor] control thread has ended
[2025-07-24 20:11:35] 2025-07-25 03:11:34,210 [wrapper] ==== pilot stdout END ====
[2025-07-24 20:11:35] 2025-07-25 03:11:34,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 20:11:35] 2025-07-25 03:11:34,278 [wrapper] pilotpid: 3024550
[2025-07-24 20:11:35] 2025-07-25 03:11:34,293 [wrapper] Pilot exit status: 0
[2025-07-24 20:11:35] 2025-07-25 03:11:34,412 [wrapper] pandaids: 6744941709
[2025-07-24 20:11:35] 2025-07-25 03:11:34,508 [wrapper] cleanup supervisor_pilot 3024560 3024551
[2025-07-24 20:11:35] 2025-07-25 03:11:34,510 [wrapper] Test setup, not cleaning
[2025-07-24 20:11:35] 2025-07-25 03:11:34,512 [wrapper] apfmon messages muted
[2025-07-24 20:11:35] 2025-07-25 03:11:34,547 [wrapper] ==== wrapper stdout END ====
[2025-07-24 20:11:35] 2025-07-25 03:11:34,622 [wrapper] ==== wrapper stderr END ====
[2025-07-24 20:11:35]  *** Error codes and diagnostics ***
[2025-07-24 20:11:35]     "exeErrorCode": 65,
[2025-07-24 20:11:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 20:11:35]     "pilotErrorCode": 1305,
[2025-07-24 20:11:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 20:11:35]  *** Listing of results directory ***
[2025-07-24 20:11:35] total 152980
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc    530466 Jul 24 16:14 pilot3.tar.gz
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc      5112 Jul 24 17:04 queuedata.json
[2025-07-24 20:11:35] -rwx------. 1 boinc boinc     36292 Jul 24 17:06 runpilot2-wrapper.sh
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc       100 Jul 24 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 20:11:35] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 20:06 run_atlas
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc       105 Jul 24 20:06 job.xml
[2025-07-24 20:11:35] -rw-r--r--. 2 boinc boinc 152568631 Jul 24 20:06 EVNT.45743347._000707.pool.root.1
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc      6596 Jul 24 20:06 init_data.xml
[2025-07-24 20:11:35] -rw-r--r--. 2 boinc boinc     15095 Jul 24 20:06 start_atlas.sh
[2025-07-24 20:11:35] drwxrwx--x. 2 boinc boinc      4096 Jul 24 20:06 shared
[2025-07-24 20:11:35] -rw-r--r--. 2 boinc boinc    542897 Jul 24 20:06 input.tar.gz
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc         0 Jul 24 20:06 boinc_lockfile
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc      2562 Jul 24 20:06 pandaJob.out
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc    979709 Jul 24 20:06 agis_schedconf.cvmfs.json
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc   1593052 Jul 24 20:07 agis_ddmendpoints.agis.ALL.json
[2025-07-24 20:11:35] drwx------. 4 boinc boinc      4096 Jul 24 20:07 pilot3
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc       523 Jul 24 20:08 boinc_task_state.xml
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc       964 Jul 24 20:08 memory_monitor_summary.json
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc     21282 Jul 24 20:08 log.45743349._013074.job.log.tgz.1
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc      8390 Jul 24 20:11 heartbeat.json
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc        95 Jul 24 20:11 pilot_heartbeat.json
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc       893 Jul 24 20:11 pilotlog.txt
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc     80091 Jul 24 20:11 log.45743349._013074.job.log.1
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc        22 Jul 24 20:11 wrapper_checkpoint.txt
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc       188 Jul 24 20:11 output.list
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc       620 Jul 24 20:11 runtime_log
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc    122880 Jul 24 20:11 result.tar.gz
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc      8192 Jul 24 20:11 boinc_mmap_file
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc      8485 Jul 24 20:11 runtime_log.err
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc       644 Jul 24 20:11 L00NDmw7Kz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmr7xKDm8N7vfm.diag
[2025-07-24 20:11:35] -rw-r--r--. 1 boinc boinc     21826 Jul 24 20:11 stderr.txt
[2025-07-24 20:11:35] No HITS result produced
[2025-07-24 20:11:35]  *** Contents of shared directory: ***
[2025-07-24 20:11:35] total 149668
[2025-07-24 20:11:35] -rw-r--r--. 2 boinc boinc 152568631 Jul 24 20:06 ATLAS.root_0
[2025-07-24 20:11:35] -rw-r--r--. 2 boinc boinc     15095 Jul 24 20:06 start_atlas.sh
[2025-07-24 20:11:35] -rw-r--r--. 2 boinc boinc    542897 Jul 24 20:06 input.tar.gz
[2025-07-24 20:11:35] -rw-------. 1 boinc boinc    122880 Jul 24 20:11 result.tar.gz
20:11:36 (3019379): run_atlas exited; CPU time 25.345812
20:11:36 (3019379): called boinc_finish(0)

</stderr_txt>
]]>

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