Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:43:56 (1468848): wrapper (7.7.26015): starting
22:43:56 (1468848): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 22:43:56] Arguments: --nthreads 8
[2025-07-24 22:43:56] Threads: 8
[2025-07-24 22:43:56] Checking for CVMFS
[2025-07-24 22:43:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 22:43:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 22:43:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 22:43:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 22:43:57] 2.12.6.0 4167112 14916 340276 148723 1 693 20290269 32935937 22945 16776704 0 79481511 99.603 139986264 19550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 22:43:57] CVMFS is ok
[2025-07-24 22:43:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 22:43:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 22:43:57] Further information can be found at the LHC@home message board.
[2025-07-24 22:43:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 22:43:57] Checking for apptainer binary...
[2025-07-24 22:43:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 22:43:57] Running /usr/bin/apptainer --version
[2025-07-24 22:43:57] apptainer version 1.4.1-1.el9
[2025-07-24 22:43:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 22:43:57] c7-16-8.aglt2.org
[2025-07-24 22:43:57] apptainer works
[2025-07-24 22:43:57] Set ATHENA_PROC_NUMBER=8
[2025-07-24 22:43:57] Set ATHENA_CORE_NUMBER=8
[2025-07-24 22:43:57] Starting ATLAS job with PandaID=6741883653
[2025-07-24 22:43:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 01:34:08]  *** The last 200 lines of the pilot log: ***
[2025-07-25 01:34:08] 2025-07-25 05:33:35,731 | INFO     | .. there are 28 such processes running
[2025-07-25 01:34:08] 2025-07-25 05:33:36,299 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 01:34:08] 2025-07-25 05:33:36,318 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3088.3118229166666
[2025-07-25 01:34:08] 2025-07-25 05:33:36,336 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6741883653/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,336 | INFO     | extracted standard info from prmon json
[2025-07-25 01:34:08] 2025-07-25 05:33:36,336 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 01:34:08] 2025-07-25 05:33:36,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 01:34:08] 2025-07-25 05:33:36,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 01:34:08] 2025-07-25 05:33:36,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 01:34:08] 2025-07-25 05:33:36,340 | INFO     | fitting pss+swap vs Time
[2025-07-25 01:34:08] 2025-07-25 05:33:36,341 | INFO     | sum of square deviations: 1418348975.4457865
[2025-07-25 01:34:08] 2025-07-25 05:33:36,341 | INFO     | sum of deviations: 17906681466.963852
[2025-07-25 01:34:08] 2025-07-25 05:33:36,342 | INFO     | mean x: 1753416514.5180724
[2025-07-25 01:34:08] 2025-07-25 05:33:36,342 | INFO     | mean y: 2219299.512048193
[2025-07-25 01:34:08] 2025-07-25 05:33:36,342 | INFO     | -- intersect: -22134695908.200344
[2025-07-25 01:34:08] 2025-07-25 05:33:36,342 | INFO     | intersect: -22134695908.200344
[2025-07-25 01:34:08] 2025-07-25 05:33:36,342 | INFO     | chi2: 1.4195246973799471
[2025-07-25 01:34:08] 2025-07-25 05:33:36,343 | INFO     | sum of square deviations: 1294003372.9441035
[2025-07-25 01:34:08] 2025-07-25 05:33:36,344 | INFO     | sum of deviations: 17649843988.341595
[2025-07-25 01:34:08] 2025-07-25 05:33:36,344 | INFO     | mean x: 1753416362.0186336
[2025-07-25 01:34:08] 2025-07-25 05:33:36,344 | INFO     | mean y: 2218973.552795031
[2025-07-25 01:34:08] 2025-07-25 05:33:36,344 | INFO     | -- intersect: -23913889657.464813
[2025-07-25 01:34:08] 2025-07-25 05:33:36,344 | INFO     | intersect: -23913889657.464813
[2025-07-25 01:34:08] 2025-07-25 05:33:36,344 | INFO     | chi2: 1.41751594674344
[2025-07-25 01:34:08] 2025-07-25 05:33:36,344 | INFO     | current chi2=1.41751594674344 (change=0.14150867823679195 %)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,345 | INFO     | right removable region: 160
[2025-07-25 01:34:08] 2025-07-25 05:33:36,345 | INFO     | sum of square deviations: 1294001542.9441035
[2025-07-25 01:34:08] 2025-07-25 05:33:36,346 | INFO     | sum of deviations: -4431177806.074533
[2025-07-25 01:34:08] 2025-07-25 05:33:36,346 | INFO     | mean x: 1753416667.0186336
[2025-07-25 01:34:08] 2025-07-25 05:33:36,346 | INFO     | mean y: 2246400.0248447205
[2025-07-25 01:34:08] 2025-07-25 05:33:36,346 | INFO     | -- intersect: 6006644974.401024
[2025-07-25 01:34:08] 2025-07-25 05:33:36,346 | INFO     | intersect: 6006644974.401024
[2025-07-25 01:34:08] 2025-07-25 05:33:36,346 | INFO     | chi2: 0.11188902952502462
[2025-07-25 01:34:08] 2025-07-25 05:33:36,346 | INFO     | current chi2=0.11188902952502462 (change=92.11785256490845 %)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,347 | INFO     | sum of square deviations: 1177142622.942304
[2025-07-25 01:34:08] 2025-07-25 05:33:36,347 | INFO     | sum of deviations: -6232997622.692307
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | mean x: 1753416819.5192308
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | mean y: 2248693.230769231
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | -- intersect: 9286631617.310604
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | intersect: 9286631617.310604
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | chi2: 0.08977384759933073
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | current chi2=0.08977384759933073 (change=19.76528174350436 %)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | left removable region: 20
[2025-07-25 01:34:08] 2025-07-25 05:33:36,348 | INFO     | sum of square deviations: 850810190.9357156
[2025-07-25 01:34:08] 2025-07-25 05:33:36,349 | INFO     | sum of deviations: -3008984751.55
[2025-07-25 01:34:08] 2025-07-25 05:33:36,349 | INFO     | mean x: 1753416941.5214286
[2025-07-25 01:34:08] 2025-07-25 05:33:36,349 | INFO     | mean y: 2246771.35
[2025-07-25 01:34:08] 2025-07-25 05:33:36,350 | INFO     | -- intersect: 6203400561.415563
[2025-07-25 01:34:08] 2025-07-25 05:33:36,350 | INFO     | intersect: 6203400561.415563
[2025-07-25 01:34:08] 2025-07-25 05:33:36,350 | INFO     | chi2: 0.07776839080272123
[2025-07-25 01:34:08] 2025-07-25 05:33:36,350 | INFO     | -- intersect: 6203400561.415563
[2025-07-25 01:34:08] 2025-07-25 05:33:36,350 | INFO     | current memory leak: -3.54 B/s (using 140 data points, chi2=0.08)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | could have reported an average CPU frequency of 3065 MHz (9 samples)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | ..............................
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | . Timing measurements:
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | . get job = 0 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | . initial setup = 2 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | . payload setup = 8 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | . stage-in = 0 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | . payload execution = 10126 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,351 | INFO     | . stage-out = 0 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,352 | INFO     | . log creation = 0 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,352 | INFO     | ..............................
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | 
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | job summary report
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | --------------------------------------------------
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | PanDA job id: 6741883653
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | task id: 45697472
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | errors: (none)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | pilot state: finished 
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | transexitcode: 0
[2025-07-25 01:34:08] 2025-07-25 05:33:36,436 | INFO     | exeerrorcode: 0
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | exeerrordiag: 
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | exitcode: 0
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | exitmsg: OK
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | cpuconsumptiontime: 51931 s
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | nevents: 400
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | neventsw: 0
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | pid: 1481382
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | pgrp: 1481382
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | corecount: 8
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | event service: False
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | sizes: {0: 2397544, 6: 2397806, 11: 2397834, 10138: 2426799, 10140: 2435797, 10143: 2435853, 10148: 2436239}
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | --------------------------------------------------
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | 
[2025-07-25 01:34:08] 2025-07-25 05:33:36,437 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-25 01:34:08] 2025-07-25 05:33:36,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | job 6741883653 has completed (purged errors)
[2025-07-25 01:34:08] 2025-07-25 05:33:36,463 | INFO     | overall cleanup function is called
[2025-07-25 01:34:08] 2025-07-25 05:33:37,472 | INFO     | --- collectZombieJob: --- 10, [1481382]
[2025-07-25 01:34:08] 2025-07-25 05:33:37,472 | INFO     | zombie collector waiting for pid 1481382
[2025-07-25 01:34:08] 2025-07-25 05:33:37,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 01:34:08] 2025-07-25 05:33:37,473 | INFO     | collected zombie processes
[2025-07-25 01:34:08] 2025-07-25 05:33:37,473 | INFO     | will attempt to kill all subprocesses of pid=1481382
[2025-07-25 01:34:08] 2025-07-25 05:33:37,896 | INFO     | process IDs to be killed: [1481382] (in reverse order)
[2025-07-25 01:34:08] 2025-07-25 05:33:38,043 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 01:34:08] 2025-07-25 05:33:38,043 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 01:34:08] 2025-07-25 05:33:38,062 | INFO     | did not find any defunct processes belonging to 1481382
[2025-07-25 01:34:08] 2025-07-25 05:33:38,081 | INFO     | did not find any defunct processes belonging to 1481382
[2025-07-25 01:34:08] 2025-07-25 05:33:38,081 | INFO     | ready for new job
[2025-07-25 01:34:08] 2025-07-25 05:33:38,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 01:34:08] 2025-07-25 05:33:38,083 | INFO     | ***************************************
[2025-07-25 01:34:08] 2025-07-25 05:33:38,083 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 01:34:08] 2025-07-25 05:33:38,083 | INFO     | ***************************************
[2025-07-25 01:34:08] 2025-07-25 05:33:38,083 | INFO     | 
[2025-07-25 01:34:08] 2025-07-25 05:33:38,101 | INFO     | architecture information:
[2025-07-25 01:34:08] 2025-07-25 05:33:38,102 | INFO     | executing command: cat /etc/os-release
[2025-07-25 01:34:08] 2025-07-25 05:33:38,119 | INFO     | cat /etc/os-release:
[2025-07-25 01:34:08] NAME="CentOS Linux"
[2025-07-25 01:34:08] VERSION="7 (Core)"
[2025-07-25 01:34:08] ID="centos"
[2025-07-25 01:34:08] ID_LIKE="rhel fedora"
[2025-07-25 01:34:08] VERSION_ID="7"
[2025-07-25 01:34:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 01:34:08] ANSI_COLOR="0;31"
[2025-07-25 01:34:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 01:34:08] HOME_URL="https://www.centos.org/"
[2025-07-25 01:34:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 01:34:08] 
[2025-07-25 01:34:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 01:34:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 01:34:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 01:34:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 01:34:08] 
[2025-07-25 01:34:08] 2025-07-25 05:33:38,120 | INFO     | ***************************************
[2025-07-25 01:34:08] 2025-07-25 05:33:38,625 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-25 01:34:08] 2025-07-25 05:33:38,643 | INFO     | sufficient remaining disk space (75129421824 B)
[2025-07-25 01:34:08] 2025-07-25 05:33:38,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 01:34:08] 2025-07-25 05:33:38,644 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 01:34:08] 2025-07-25 05:33:38,644 | INFO     | update_server=False
[2025-07-25 01:34:08] 2025-07-25 05:33:38,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 01:34:08] 2025-07-25 05:33:38,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 01:34:08] 2025-07-25 05:33:39,063 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 01:34:08] 2025-07-25 05:33:39,065 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 01:34:08] 2025-07-25 05:33:39,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 01:34:08] 2025-07-25 05:33:39,065 | INFO     | will abort loop
[2025-07-25 01:34:08] 2025-07-25 05:33:39,137 | INFO     | all data control threads have been joined
[2025-07-25 01:34:08] 2025-07-25 05:33:39,649 | INFO     | [job] retrieve thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:39,698 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:39,754 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:39,822 | INFO     | all payload control threads have been joined
[2025-07-25 01:34:08] 2025-07-25 05:33:40,070 | INFO     | [job] job monitor thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,143 | INFO     | [data] control thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,157 | INFO     | [payload] validate_post thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,232 | INFO     | [payload] failed_post thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,289 | INFO     | all job control threads have been joined
[2025-07-25 01:34:08] 2025-07-25 05:33:40,819 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,827 | INFO     | [payload] control thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,884 | INFO     | [data] copytool_out thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,928 | INFO     | [job] validate thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:40,988 | INFO     | [data] copytool_in thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:41,295 | INFO     | [job] control thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:41,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 01:34:08] 2025-07-25 05:33:41,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 01:34:08] 2025-07-25 05:33:42,452 | INFO     | [job] queue monitor thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:45,896 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:49,548 | INFO     | job.realtimelogging is not enabled
[2025-07-25 01:34:08] 2025-07-25 05:33:50,554 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 01:34:08] 2025-07-25 05:33:50,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585973770048)>', '<ExcThread(monitor, started 140585700660992)>']
[2025-07-25 01:34:08] 2025-07-25 05:33:55,816 | INFO     | all workflow threads have been joined
[2025-07-25 01:34:08] 2025-07-25 05:33:55,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 01:34:08] 2025-07-25 05:33:55,816 | INFO     | traces error code: 0
[2025-07-25 01:34:08] 2025-07-25 05:33:55,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 01:34:08] 2025-07-25 05:34:08,358 | INFO     | PID=1472948 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 01:34:08] 2025-07-25 05:34:08,358 | INFO     | .. there are 27 such processes running
[2025-07-25 01:34:08] 2025-07-25 05:34:08,359 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 01:34:08] 2025-07-25 05:34:08,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 01:34:08] 2025-07-25 05:34:08,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 01:34:08] 2025-07-25 05:34:08,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 01:34:08] 2025-07-25 05:34:08,359 | INFO     | [monitor] control thread has ended
[2025-07-25 01:34:08] 2025-07-25 05:34:08,612 [wrapper] ==== pilot stdout END ====
[2025-07-25 01:34:08] 2025-07-25 05:34:08,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 01:34:08] 2025-07-25 05:34:08,642 [wrapper] pilotpid: 1472948
[2025-07-25 01:34:08] 2025-07-25 05:34:08,649 [wrapper] Pilot exit status: 0
[2025-07-25 01:34:08] 2025-07-25 05:34:08,673 [wrapper] pandaids: 6741883653
[2025-07-25 01:34:08] 2025-07-25 05:34:08,793 [wrapper] cleanup supervisor_pilot 2026766 1472949
[2025-07-25 01:34:08] 2025-07-25 05:34:08,797 [wrapper] Test setup, not cleaning
[2025-07-25 01:34:08] 2025-07-25 05:34:08,800 [wrapper] apfmon messages muted
[2025-07-25 01:34:08] 2025-07-25 05:34:08,802 [wrapper] ==== wrapper stdout END ====
[2025-07-25 01:34:08] 2025-07-25 05:34:08,806 [wrapper] ==== wrapper stderr END ====
[2025-07-25 01:34:08]  *** Error codes and diagnostics ***
[2025-07-25 01:34:08]     "exeErrorCode": 0,
[2025-07-25 01:34:08]     "exeErrorDiag": "",
[2025-07-25 01:34:08]     "pilotErrorCode": 0,
[2025-07-25 01:34:08]     "pilotErrorDiag": "",
[2025-07-25 01:34:08]  *** Listing of results directory ***
[2025-07-25 01:34:08] total 610328
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 03:44 pilot3.tar.gz
[2025-07-25 01:34:08] -rwx------. 1 boincer umatlas     36292 Jul 23 03:54 runpilot2-wrapper.sh
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 03:54 queuedata.json
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas       100 Jul 24 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 01:34:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 22:43 run_atlas
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas       105 Jul 24 22:43 job.xml
[2025-07-25 01:34:08] -rw-r--r--. 2 boincer umatlas 333714901 Jul 24 22:43 EVNT.45697470._000187.pool.root.1
[2025-07-25 01:34:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 22:43 start_atlas.sh
[2025-07-25 01:34:08] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 22:43 shared
[2025-07-25 01:34:08] -rw-r--r--. 2 boincer umatlas    542899 Jul 24 22:43 input.tar.gz
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas         0 Jul 24 22:43 boinc_lockfile
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas      2611 Jul 24 22:43 pandaJob.out
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas    979709 Jul 24 22:44 agis_schedconf.cvmfs.json
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas   1593052 Jul 24 22:44 agis_ddmendpoints.agis.ALL.json
[2025-07-25 01:34:08] drwx------. 4 boincer umatlas      4096 Jul 24 22:44 pilot3
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas      6932 Jul 25 01:30 init_data.xml
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas 284847232 Jul 25 01:32 HITS.45697472._004086.pool.root.1
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas       530 Jul 25 01:32 boinc_task_state.xml
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas      1034 Jul 25 01:33 memory_monitor_summary.json
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas    355986 Jul 25 01:33 log.45697472._004086.job.log.tgz.1
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas      7774 Jul 25 01:33 heartbeat.json
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas        27 Jul 25 01:34 wrapper_checkpoint.txt
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 01:34 boinc_mmap_file
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas        95 Jul 25 01:34 pilot_heartbeat.json
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas       823 Jul 25 01:34 pilotlog.txt
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas    911875 Jul 25 01:34 log.45697472._004086.job.log.1
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas       357 Jul 25 01:34 output.list
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas       620 Jul 25 01:34 runtime_log
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas   1290240 Jul 25 01:34 result.tar.gz
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas      8656 Jul 25 01:34 runtime_log.err
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas       653 Jul 25 01:34 llPLDmzTjy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmywvKDm4jkrPm.diag
[2025-07-25 01:34:08] -rw-r--r--. 1 boincer umatlas     21138 Jul 25 01:34 stderr.txt
[2025-07-25 01:34:08] HITS file was successfully produced:
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas 284847232 Jul 25 01:32 shared/HITS.pool.root.1
[2025-07-25 01:34:08]  *** Contents of shared directory: ***
[2025-07-25 01:34:08] total 605884
[2025-07-25 01:34:08] -rw-r--r--. 2 boincer umatlas 333714901 Jul 24 22:43 ATLAS.root_0
[2025-07-25 01:34:08] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 22:43 start_atlas.sh
[2025-07-25 01:34:08] -rw-r--r--. 2 boincer umatlas    542899 Jul 24 22:43 input.tar.gz
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas 284847232 Jul 25 01:32 HITS.pool.root.1
[2025-07-25 01:34:08] -rw-------. 1 boincer umatlas   1290240 Jul 25 01:34 result.tar.gz
01:34:10 (1468848): run_atlas exited; CPU time 52296.516548
01:34:10 (1468848): called boinc_finish(0)

</stderr_txt>
]]>

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