Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:09:17 (11796): wrapper (7.7.26015): starting
11:09:17 (11796): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 11:09:17] Arguments: --nthreads 8
[2025-07-25 11:09:17] Threads: 8
[2025-07-25 11:09:17] Checking for CVMFS
[2025-07-25 11:09:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:09:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:09:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:09:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:09:18] 2.11.2.0 8420 106464 137196 148733 2 109 17053994 25165825 4353 130560 0 75689581 99.863 54110963 3727 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-25 11:09:18] CVMFS is ok
[2025-07-25 11:09:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:09:18] Checking for apptainer binary...
[2025-07-25 11:09:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:09:18] Running /usr/bin/apptainer --version
[2025-07-25 11:09:18] apptainer version 1.3.2-1.el7
[2025-07-25 11:09:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:09:20] cg-vwn396.simple-grid.lan
[2025-07-25 11:09:20] apptainer works
[2025-07-25 11:09:20] Set ATHENA_PROC_NUMBER=8
[2025-07-25 11:09:20] Set ATHENA_CORE_NUMBER=8
[2025-07-25 11:09:20] Starting ATLAS job with PandaID=6744934062
[2025-07-25 11:09:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 22:52:28]  *** The last 200 lines of the pilot log: ***
[2025-07-25 22:52:28] 2025-07-25 13:47:48,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 22:52:28] 2025-07-25 13:47:48,926 | INFO     | fitting pss+swap vs Time
[2025-07-25 22:52:28] 2025-07-25 13:47:48,935 | INFO     | sum of square deviations: 6171352920.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,938 | INFO     | sum of deviations: 55735463197.999985
[2025-07-25 22:52:28] 2025-07-25 13:47:48,938 | INFO     | mean x: 1753442871.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,939 | INFO     | mean y: 2468570.0553505537
[2025-07-25 22:52:28] 2025-07-25 13:47:48,939 | INFO     | -- intersect: -15833435140.733553
[2025-07-25 22:52:28] 2025-07-25 13:47:48,939 | INFO     | intersect: -15833435140.733553
[2025-07-25 22:52:28] 2025-07-25 13:47:48,939 | INFO     | chi2: 2.2971561517977532
[2025-07-25 22:52:28] 2025-07-25 13:47:48,940 | INFO     | sum of square deviations: 5836025702.5
[2025-07-25 22:52:28] 2025-07-25 13:47:48,943 | INFO     | sum of deviations: 72818873860.5
[2025-07-25 22:52:28] 2025-07-25 13:47:48,943 | INFO     | mean x: 1753442718.5
[2025-07-25 22:52:28] 2025-07-25 13:47:48,943 | INFO     | mean y: 2476212.6804511277
[2025-07-25 22:52:28] 2025-07-25 13:47:48,943 | INFO     | -- intersect: -21876064192.884823
[2025-07-25 22:52:28] 2025-07-25 13:47:48,943 | INFO     | intersect: -21876064192.884823
[2025-07-25 22:52:28] 2025-07-25 13:47:48,944 | INFO     | chi2: 1.4706001324771296
[2025-07-25 22:52:28] 2025-07-25 13:47:48,944 | INFO     | current chi2=1.4706001324771296 (change=35.981708020752585 %)
[2025-07-25 22:52:28] 2025-07-25 13:47:48,944 | INFO     | sum of square deviations: 5513070810.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,947 | INFO     | sum of deviations: 70997230525.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,947 | INFO     | mean x: 1753442566.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,947 | INFO     | mean y: 2475352.409961686
[2025-07-25 22:52:28] 2025-07-25 13:47:48,947 | INFO     | -- intersect: -22578327681.144676
[2025-07-25 22:52:28] 2025-07-25 13:47:48,948 | INFO     | intersect: -22578327681.144676
[2025-07-25 22:52:28] 2025-07-25 13:47:48,958 | INFO     | chi2: 1.4702868825426474
[2025-07-25 22:52:28] 2025-07-25 13:47:48,959 | INFO     | current chi2=1.4702868825426474 (change=0.02130082321933293 %)
[2025-07-25 22:52:28] 2025-07-25 13:47:48,959 | INFO     | right removable region: 260
[2025-07-25 22:52:28] 2025-07-25 13:47:48,959 | INFO     | sum of square deviations: 5836025702.5
[2025-07-25 22:52:28] 2025-07-25 13:47:48,962 | INFO     | sum of deviations: 15013735531.999992
[2025-07-25 22:52:28] 2025-07-25 13:47:48,962 | INFO     | mean x: 1753443023.5
[2025-07-25 22:52:28] 2025-07-25 13:47:48,962 | INFO     | mean y: 2486933.2932330826
[2025-07-25 22:52:28] 2025-07-25 13:47:48,962 | INFO     | -- intersect: -4508413320.964077
[2025-07-25 22:52:28] 2025-07-25 13:47:48,962 | INFO     | intersect: -4508413320.964077
[2025-07-25 22:52:28] 2025-07-25 13:47:48,963 | INFO     | chi2: 0.9043585786564353
[2025-07-25 22:52:28] 2025-07-25 13:47:48,963 | INFO     | current chi2=0.9043585786564353 (change=60.631384246617934 %)
[2025-07-25 22:52:28] 2025-07-25 13:47:48,963 | INFO     | sum of square deviations: 5513070810.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,966 | INFO     | sum of deviations: 4676678338.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,966 | INFO     | mean x: 1753443176.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,966 | INFO     | mean y: 2491816.9118773947
[2025-07-25 22:52:28] 2025-07-25 13:47:48,966 | INFO     | -- intersect: -1484935063.809272
[2025-07-25 22:52:28] 2025-07-25 13:47:48,966 | INFO     | intersect: -1484935063.809272
[2025-07-25 22:52:28] 2025-07-25 13:47:48,967 | INFO     | chi2: 0.8460077246659803
[2025-07-25 22:52:28] 2025-07-25 13:47:48,967 | INFO     | current chi2=0.8460077246659803 (change=6.4521811776413145 %)
[2025-07-25 22:52:28] 2025-07-25 13:47:48,967 | INFO     | left removable region: 20
[2025-07-25 22:52:28] 2025-07-25 13:47:48,968 | INFO     | sum of square deviations: 4286517580.0
[2025-07-25 22:52:28] 2025-07-25 13:47:48,970 | INFO     | sum of deviations: 15890592506.499998
[2025-07-25 22:52:28] 2025-07-25 13:47:48,970 | INFO     | mean x: 1753443145.5
[2025-07-25 22:52:28] 2025-07-25 13:47:48,970 | INFO     | mean y: 2502532.4625
[2025-07-25 22:52:28] 2025-07-25 13:47:48,970 | INFO     | -- intersect: -6497704217.75829
[2025-07-25 22:52:28] 2025-07-25 13:47:48,970 | INFO     | intersect: -6497704217.75829
[2025-07-25 22:52:28] 2025-07-25 13:47:48,971 | INFO     | chi2: 0.0017827495116414995
[2025-07-25 22:52:28] 2025-07-25 13:47:48,971 | INFO     | -- intersect: -6497704217.75829
[2025-07-25 22:52:28] 2025-07-25 13:47:48,971 | INFO     | current memory leak: 3.71 B/s (using 240 data points, chi2=0.00)
[2025-07-25 22:52:28] 2025-07-25 13:47:48,983 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-25 22:52:28] 2025-07-25 13:47:48,983 | INFO     | ..............................
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . Timing measurements:
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . get job = 0 s
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . initial setup = 1 s
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . payload setup = 14 s
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . stage-in = 0 s
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . payload execution = 16550 s
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . stage-out = 1 s
[2025-07-25 22:52:28] 2025-07-25 13:47:48,984 | INFO     | . log creation = 0 s
[2025-07-25 22:52:28] 2025-07-25 13:47:48,985 | INFO     | ..............................
[2025-07-25 22:52:28] 2025-07-25 13:47:49,130 | INFO     | 
[2025-07-25 22:52:28] 2025-07-25 13:47:49,130 | INFO     | job summary report
[2025-07-25 22:52:28] 2025-07-25 13:47:49,130 | INFO     | --------------------------------------------------
[2025-07-25 22:52:28] 2025-07-25 13:47:49,130 | INFO     | PanDA job id: 6744934062
[2025-07-25 22:52:28] 2025-07-25 13:47:49,130 | INFO     | task id: 45743349
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | errors: (none)
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | pilot state: finished 
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | transexitcode: 0
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | exeerrorcode: 0
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | exeerrordiag: 
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | exitcode: 0
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | exitmsg: OK
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | cpuconsumptiontime: 62368 s
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | nevents: 400
[2025-07-25 22:52:28] 2025-07-25 13:47:49,131 | INFO     | neventsw: 0
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | pid: 22332
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | pgrp: 22332
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | corecount: 8
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | event service: False
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | sizes: {0: 2397302, 1: 2397501, 9: 2397763, 12: 2397791, 16569: 2428975, 16571: 2437973, 16574: 2438157, 16669: 2438351}
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | --------------------------------------------------
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | 
[2025-07-25 22:52:28] 2025-07-25 13:47:49,132 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-07-25 22:52:28] 2025-07-25 13:47:49,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 22:52:28] 2025-07-25 13:47:49,497 | INFO     | job 6744934062 has completed (purged errors)
[2025-07-25 22:52:28] 2025-07-25 13:47:49,497 | INFO     | overall cleanup function is called
[2025-07-25 22:52:28] 2025-07-25 13:47:50,506 | INFO     | --- collectZombieJob: --- 10, [22332]
[2025-07-25 22:52:28] 2025-07-25 13:47:50,506 | INFO     | zombie collector waiting for pid 22332
[2025-07-25 22:52:28] 2025-07-25 13:47:50,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 22:52:28] 2025-07-25 13:47:50,506 | INFO     | collected zombie processes
[2025-07-25 22:52:28] 2025-07-25 13:47:50,506 | INFO     | will attempt to kill all subprocesses of pid=22332
[2025-07-25 22:52:28] 2025-07-25 13:47:50,614 | INFO     | process IDs to be killed: [22332] (in reverse order)
[2025-07-25 22:52:28] 2025-07-25 13:47:51,289 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 22:52:28] 2025-07-25 13:47:51,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 22:52:28] 2025-07-25 13:47:51,292 | INFO     | did not find any defunct processes belonging to 22332
[2025-07-25 22:52:28] 2025-07-25 13:47:51,295 | INFO     | did not find any defunct processes belonging to 22332
[2025-07-25 22:52:28] 2025-07-25 13:47:51,295 | INFO     | ready for new job
[2025-07-25 22:52:28] 2025-07-25 13:47:51,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 22:52:28] 2025-07-25 13:47:51,297 | INFO     | ***************************************
[2025-07-25 22:52:28] 2025-07-25 13:47:51,297 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 22:52:28] 2025-07-25 13:47:51,297 | INFO     | ***************************************
[2025-07-25 22:52:28] 2025-07-25 13:47:51,297 | INFO     | 
[2025-07-25 22:52:28] 2025-07-25 13:47:51,298 | INFO     | pilot is running in a VM
[2025-07-25 22:52:28] 2025-07-25 13:47:51,298 | INFO     | architecture information:
[2025-07-25 22:52:28] 2025-07-25 13:47:51,299 | INFO     | executing command: cat /etc/os-release
[2025-07-25 22:52:28] 2025-07-25 13:47:51,570 | INFO     | cat /etc/os-release:
[2025-07-25 22:52:28] NAME="CentOS Linux"
[2025-07-25 22:52:28] VERSION="7 (Core)"
[2025-07-25 22:52:28] ID="centos"
[2025-07-25 22:52:28] ID_LIKE="rhel fedora"
[2025-07-25 22:52:28] VERSION_ID="7"
[2025-07-25 22:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 22:52:28] ANSI_COLOR="0;31"
[2025-07-25 22:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 22:52:28] HOME_URL="https://www.centos.org/"
[2025-07-25 22:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 22:52:28] 
[2025-07-25 22:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 22:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 22:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 22:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 22:52:28] 
[2025-07-25 22:52:28] 2025-07-25 13:47:51,571 | INFO     | ***************************************
[2025-07-25 22:52:28] 2025-07-25 13:47:52,074 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-07-25 22:52:28] 2025-07-25 13:47:52,279 | INFO     | sufficient remaining disk space (496671653888 B)
[2025-07-25 22:52:28] 2025-07-25 13:47:52,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 22:52:28] 2025-07-25 13:47:52,279 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 22:52:28] 2025-07-25 13:47:52,279 | INFO     | update_server=False
[2025-07-25 22:52:28] 2025-07-25 13:47:52,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 22:52:28] 2025-07-25 13:47:52,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 22:52:28] 2025-07-25 13:47:52,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:52:28] 2025-07-25 13:47:52,290 | INFO     | aborting loop
[2025-07-25 22:52:28] 2025-07-25 13:47:52,664 | INFO     | all data control threads have been joined
[2025-07-25 22:52:28] 2025-07-25 13:47:53,286 | INFO     | [job] retrieve thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:53,296 | INFO     | [job] job monitor thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:53,437 | INFO     | all job control threads have been joined
[2025-07-25 22:52:28] 2025-07-25 13:47:53,448 | INFO     | [job] validate thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:53,554 | INFO     | all payload control threads have been joined
[2025-07-25 22:52:28] 2025-07-25 13:47:53,670 | INFO     | [data] control thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:53,705 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:53,726 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:53,809 | INFO     | [data] copytool_in thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:54,048 | INFO     | [payload] failed_post thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:54,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 22:52:28] 2025-07-25 13:47:54,225 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:54,288 | INFO     | [data] copytool_out thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:54,443 | INFO     | [job] control thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:54,560 | INFO     | [payload] control thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:54,566 | INFO     | [payload] validate_post thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:54,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 22:52:28] 2025-07-25 13:47:55,154 | INFO     | [job] queue monitor thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:47:58,877 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:48:03,222 | INFO     | job.realtimelogging is not enabled
[2025-07-25 22:52:28] 2025-07-25 13:48:04,228 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 22:52:28] 2025-07-25 13:48:06,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117046048576)>', '<ExcThread(monitor, started 140116345460480)>']
[2025-07-25 22:52:28] 2025-07-25 13:48:11,100 | INFO     | all workflow threads have been joined
[2025-07-25 22:52:28] 2025-07-25 13:48:11,100 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 22:52:28] 2025-07-25 13:48:11,100 | INFO     | traces error code: 0
[2025-07-25 22:52:28] 2025-07-25 13:48:11,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 22:52:28] 2025-07-25 13:48:21,025 | INFO     | PID=15820 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 22:52:28] 2025-07-25 13:48:21,025 | INFO     | .. there are 9 such processes running
[2025-07-25 22:52:28] 2025-07-25 13:48:21,026 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 22:52:28] 2025-07-25 13:48:21,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 22:52:28] 2025-07-25 13:48:21,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 22:52:28] 2025-07-25 13:48:21,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 22:52:28] 2025-07-25 13:48:21,026 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 22:52:28] 2025-07-25 13:48:21,027 | INFO     | [monitor] control thread has ended
[2025-07-25 22:52:28] 2025-07-25 13:48:21,274 [wrapper] ==== pilot stdout END ====
[2025-07-25 22:52:28] 2025-07-25 13:48:21,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 22:52:28] 2025-07-25 13:48:21,286 [wrapper] pilotpid: 15820
[2025-07-25 22:52:28] 2025-07-25 13:48:21,289 [wrapper] Pilot exit status: 0
[2025-07-25 22:52:28] 2025-07-25 13:48:21,306 [wrapper] pandaids: 6744934062
[2025-07-25 22:52:28] 2025-07-25 13:48:21,352 [wrapper] cleanup supervisor_pilot 23004 15821
[2025-07-25 22:52:28] 2025-07-25 13:48:21,369 [wrapper] Test setup, not cleaning
[2025-07-25 22:52:28] 2025-07-25 13:48:21,425 [wrapper] apfmon messages muted
[2025-07-25 22:52:28] 2025-07-25 13:48:21,536 [wrapper] ==== wrapper stdout END ====
[2025-07-25 22:52:28] 2025-07-25 13:48:21,635 [wrapper] ==== wrapper stderr END ====
[2025-07-25 22:52:28]  *** Error codes and diagnostics ***
[2025-07-25 22:52:28]     "exeErrorCode": 0,
[2025-07-25 22:52:28]     "exeErrorDiag": "",
[2025-07-25 22:52:28]     "pilotErrorCode": 0,
[2025-07-25 22:52:28]     "pilotErrorDiag": "",
[2025-07-25 22:52:28]  *** Listing of results directory ***
[2025-07-25 22:52:28] total 352824
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc    530466 Jul 24 23:32 pilot3.tar.gz
[2025-07-25 22:52:28] -rwx------. 1 boinc boinc     36292 Jul 24 23:39 runpilot2-wrapper.sh
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc      5112 Jul 24 23:39 queuedata.json
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc       100 Jul 25 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 22:52:28] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 11:09 run_atlas
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc       105 Jul 25 11:09 job.xml
[2025-07-25 22:52:28] -rw-r--r--. 2 boinc boinc 145637706 Jul 25 11:09 EVNT.45743347._000590.pool.root.1
[2025-07-25 22:52:28] -rw-r--r--. 2 boinc boinc     15095 Jul 25 11:09 start_atlas.sh
[2025-07-25 22:52:28] drwxrwx--x. 2 boinc boinc        68 Jul 25 11:09 shared
[2025-07-25 22:52:28] -rw-r--r--. 2 boinc boinc    542889 Jul 25 11:09 input.tar.gz
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc      6391 Jul 25 11:09 init_data.xml
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc         0 Jul 25 11:09 boinc_lockfile
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc      2562 Jul 25 11:09 pandaJob.out
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc    979709 Jul 25 11:09 agis_schedconf.cvmfs.json
[2025-07-25 22:52:28] drwx------. 4 boinc boinc      4096 Jul 25 11:09 pilot3
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc 208099137 Jul 25 15:44 HITS.45743349._010637.pool.root.1
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc       531 Jul 25 15:45 boinc_task_state.xml
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc      1021 Jul 25 15:46 memory_monitor_summary.json
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc   1593052 Jul 25 15:46 agis_ddmendpoints.agis.ALL.json
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc    402213 Jul 25 15:46 log.45743349._010637.job.log.tgz.1
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc      7779 Jul 25 15:47 heartbeat.json
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc        95 Jul 25 15:48 pilot_heartbeat.json
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc       890 Jul 25 15:48 pilotlog.txt
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc   1444036 Jul 25 15:48 log.45743349._010637.job.log.1
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc       357 Jul 25 15:48 output.list
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc       620 Jul 25 15:48 runtime_log
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc   1863680 Jul 25 15:48 result.tar.gz
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc      8660 Jul 25 15:48 runtime_log.err
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc       657 Jul 25 15:48 brAMDmppIz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYrxKDmVNURhn.diag
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc      8192 Jul 25 22:52 boinc_mmap_file
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc        28 Jul 25 22:52 wrapper_checkpoint.txt
[2025-07-25 22:52:28] -rw-r--r--. 1 boinc boinc     20560 Jul 25 22:52 stderr.txt
[2025-07-25 22:52:28] HITS file was successfully produced:
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc 208099137 Jul 25 15:44 shared/HITS.pool.root.1
[2025-07-25 22:52:28]  *** Contents of shared directory: ***
[2025-07-25 22:52:28] total 347820
[2025-07-25 22:52:28] -rw-r--r--. 2 boinc boinc 145637706 Jul 25 11:09 ATLAS.root_0
[2025-07-25 22:52:28] -rw-r--r--. 2 boinc boinc     15095 Jul 25 11:09 start_atlas.sh
[2025-07-25 22:52:28] -rw-r--r--. 2 boinc boinc    542889 Jul 25 11:09 input.tar.gz
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc 208099137 Jul 25 15:44 HITS.pool.root.1
[2025-07-25 22:52:28] -rw-------. 1 boinc boinc   1863680 Jul 25 15:48 result.tar.gz
22:52:30 (11796): run_atlas exited; CPU time 62577.738973
22:52:30 (11796): called boinc_finish(0)

</stderr_txt>
]]>

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