Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:29:43 (16854): wrapper (7.7.26015): starting
22:29:43 (16854): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 22:29:43] Arguments: --nthreads 8
[2025-07-24 22:29:43] Threads: 8
[2025-07-24 22:29:43] Checking for CVMFS
[2025-07-24 22:29:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 22:29:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 22:29:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 22:29:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 22:29:43] 2.11.2.0 2886 108537 108208 148723 2 59 12580237 20275201 1 130560 0 27555936 99.952 10228575 10763 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 22:29:43] CVMFS is ok
[2025-07-24 22:29:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 22:29:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 22:29:43] Further information can be found at the LHC@home message board.
[2025-07-24 22:29:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 22:29:43] Checking for apptainer binary...
[2025-07-24 22:29:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 22:29:43] Running /usr/bin/apptainer --version
[2025-07-24 22:29:43] apptainer version 1.3.2-1.el7
[2025-07-24 22:29:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 22:29:45] c-204-33.aglt2.org
[2025-07-24 22:29:45] apptainer works
[2025-07-24 22:29:45] Set ATHENA_PROC_NUMBER=8
[2025-07-24 22:29:45] Set ATHENA_CORE_NUMBER=8
[2025-07-24 22:29:45] Starting ATLAS job with PandaID=6744922888
[2025-07-24 22:29:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:12:52 (17797): wrapper (7.7.26015): starting
01:12:52 (17797): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 01:12:52] Arguments: --nthreads 8
[2025-07-25 01:12:52] Threads: 8
[2025-07-25 01:12:52] This job has been restarted, cleaning up previous attempt
[2025-07-25 01:12:52] Checking for CVMFS
[2025-07-25 01:12:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 01:12:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 01:12:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 01:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 01:12:53] 2.11.2.0 2886 108700 108448 148727 3 39 12647508 20275201 1 130560 0 27641400 99.952 10233951 10766 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-25 01:12:53] CVMFS is ok
[2025-07-25 01:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 01:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 01:12:53] Further information can be found at the LHC@home message board.
[2025-07-25 01:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 01:12:53] Checking for apptainer binary...
[2025-07-25 01:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 01:12:53] Running /usr/bin/apptainer --version
[2025-07-25 01:12:53] apptainer version 1.3.2-1.el7
[2025-07-25 01:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 01:12:54] c-204-33.aglt2.org
[2025-07-25 01:12:54] apptainer works
[2025-07-25 01:12:54] Set ATHENA_PROC_NUMBER=8
[2025-07-25 01:12:54] Set ATHENA_CORE_NUMBER=8
[2025-07-25 01:12:54] Starting ATLAS job with PandaID=6744922888
[2025-07-25 01:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 03:42:53]  *** The last 200 lines of the pilot log: ***
[2025-07-25 03:42:53] 2025-07-25 07:42:19,924 | INFO     | extracted standard info from prmon json
[2025-07-25 03:42:53] 2025-07-25 07:42:19,924 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 03:42:53] 2025-07-25 07:42:19,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 03:42:53] 2025-07-25 07:42:19,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 03:42:53] 2025-07-25 07:42:19,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 03:42:53] 2025-07-25 07:42:19,928 | INFO     | fitting pss+swap vs Time
[2025-07-25 03:42:53] 2025-07-25 07:42:19,928 | INFO     | sum of square deviations: 964976232.5
[2025-07-25 03:42:53] 2025-07-25 07:42:19,929 | INFO     | sum of deviations: 21045851194.000004
[2025-07-25 03:42:53] 2025-07-25 07:42:19,929 | INFO     | mean x: 1753424844.5
[2025-07-25 03:42:53] 2025-07-25 07:42:19,929 | INFO     | mean y: 2493532.02739726
[2025-07-25 03:42:53] 2025-07-25 07:42:19,930 | INFO     | -- intersect: -38239192754.48909
[2025-07-25 03:42:53] 2025-07-25 07:42:19,930 | INFO     | intersect: -38239192754.48909
[2025-07-25 03:42:53] 2025-07-25 07:42:19,930 | INFO     | chi2: 1.473195105281897
[2025-07-25 03:42:53] 2025-07-25 07:42:19,930 | INFO     | sum of square deviations: 869188390.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,931 | INFO     | sum of deviations: 20398749774.000004
[2025-07-25 03:42:53] 2025-07-25 07:42:19,931 | INFO     | mean x: 1753424692.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,931 | INFO     | mean y: 2492501.404255319
[2025-07-25 03:42:53] 2025-07-25 07:42:19,931 | INFO     | -- intersect: -41148162467.26258
[2025-07-25 03:42:53] 2025-07-25 07:42:19,932 | INFO     | intersect: -41148162467.26258
[2025-07-25 03:42:53] 2025-07-25 07:42:19,932 | INFO     | chi2: 1.4742942383378734
[2025-07-25 03:42:53] 2025-07-25 07:42:19,932 | INFO     | current chi2=1.4742942383378734 (change=-0.07460879092223838 %)
[2025-07-25 03:42:53] 2025-07-25 07:42:19,932 | INFO     | right removable region: 140
[2025-07-25 03:42:53] 2025-07-25 07:42:19,932 | INFO     | sum of square deviations: 869188390.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,933 | INFO     | sum of deviations: -2095002238.999998
[2025-07-25 03:42:53] 2025-07-25 07:42:19,933 | INFO     | mean x: 1753424997.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,933 | INFO     | mean y: 2529897.581560284
[2025-07-25 03:42:53] 2025-07-25 07:42:19,934 | INFO     | -- intersect: 4228805049.0864773
[2025-07-25 03:42:53] 2025-07-25 07:42:19,934 | INFO     | intersect: 4228805049.0864773
[2025-07-25 03:42:53] 2025-07-25 07:42:19,934 | INFO     | chi2: 0.05177695704186882
[2025-07-25 03:42:53] 2025-07-25 07:42:19,934 | INFO     | current chi2=0.05177695704186882 (change=96.48539715776742 %)
[2025-07-25 03:42:53] 2025-07-25 07:42:19,934 | INFO     | sum of square deviations: 779958810.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,935 | INFO     | sum of deviations: -5490566659.5
[2025-07-25 03:42:53] 2025-07-25 07:42:19,935 | INFO     | mean x: 1753425149.5
[2025-07-25 03:42:53] 2025-07-25 07:42:19,935 | INFO     | mean y: 2535606.595588235
[2025-07-25 03:42:53] 2025-07-25 07:42:19,935 | INFO     | -- intersect: 12345876745.05071
[2025-07-25 03:42:53] 2025-07-25 07:42:19,936 | INFO     | intersect: 12345876745.05071
[2025-07-25 03:42:53] 2025-07-25 07:42:19,936 | INFO     | chi2: 0.010615382573704361
[2025-07-25 03:42:53] 2025-07-25 07:42:19,936 | INFO     | current chi2=0.010615382573704361 (change=79.4978631804871 %)
[2025-07-25 03:42:53] 2025-07-25 07:42:19,936 | INFO     | sum of square deviations: 697054930.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,937 | INFO     | sum of deviations: -5406331180.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,937 | INFO     | mean x: 1753425302.0
[2025-07-25 03:42:53] 2025-07-25 07:42:19,937 | INFO     | mean y: 2535441.427480916
[2025-07-25 03:42:53] 2025-07-25 07:42:19,937 | INFO     | -- intersect: 13602034525.385637
[2025-07-25 03:42:53] 2025-07-25 07:42:19,937 | INFO     | intersect: 13602034525.385637
[2025-07-25 03:42:53] 2025-07-25 07:42:19,938 | INFO     | chi2: 0.009966309063739676
[2025-07-25 03:42:53] 2025-07-25 07:42:19,938 | INFO     | current chi2=0.009966309063739676 (change=6.114461777124471 %)
[2025-07-25 03:42:53] 2025-07-25 07:42:19,938 | INFO     | left removable region: 30
[2025-07-25 03:42:53] 2025-07-25 07:42:19,938 | INFO     | sum of square deviations: 412686807.5
[2025-07-25 03:42:53] 2025-07-25 07:42:19,939 | INFO     | sum of deviations: -2943725342.4999995
[2025-07-25 03:42:53] 2025-07-25 07:42:19,939 | INFO     | mean x: 1753425576.5
[2025-07-25 03:42:53] 2025-07-25 07:42:19,939 | INFO     | mean y: 2530854.590909091
[2025-07-25 03:42:53] 2025-07-25 07:42:19,939 | INFO     | -- intersect: 12509844420.049921
[2025-07-25 03:42:53] 2025-07-25 07:42:19,939 | INFO     | intersect: 12509844420.049921
[2025-07-25 03:42:53] 2025-07-25 07:42:19,940 | INFO     | chi2: 0.009082175154844063
[2025-07-25 03:42:53] 2025-07-25 07:42:19,940 | INFO     | -- intersect: 12509844420.049921
[2025-07-25 03:42:53] 2025-07-25 07:42:19,940 | INFO     | current memory leak: -7.13 B/s (using 110 data points, chi2=0.01)
[2025-07-25 03:42:53] 2025-07-25 07:42:19,940 | INFO     | could have reported an average CPU frequency of 1997 MHz (8 samples)
[2025-07-25 03:42:53] 2025-07-25 07:42:19,940 | INFO     | ..............................
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . Timing measurements:
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . get job = 0 s
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . initial setup = 1 s
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . payload setup = 11 s
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . stage-in = 0 s
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . payload execution = 8907 s
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . stage-out = 2 s
[2025-07-25 03:42:53] 2025-07-25 07:42:19,941 | INFO     | . log creation = 0 s
[2025-07-25 03:42:53] 2025-07-25 07:42:19,942 | INFO     | ..............................
[2025-07-25 03:42:53] 2025-07-25 07:42:20,038 | INFO     | 
[2025-07-25 03:42:53] 2025-07-25 07:42:20,038 | INFO     | job summary report
[2025-07-25 03:42:53] 2025-07-25 07:42:20,039 | INFO     | --------------------------------------------------
[2025-07-25 03:42:53] 2025-07-25 07:42:20,039 | INFO     | PanDA job id: 6744922888
[2025-07-25 03:42:53] 2025-07-25 07:42:20,039 | INFO     | task id: 45743349
[2025-07-25 03:42:53] 2025-07-25 07:42:20,039 | INFO     | errors: (none)
[2025-07-25 03:42:53] 2025-07-25 07:42:20,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 03:42:53] 2025-07-25 07:42:20,040 | INFO     | pilot state: finished 
[2025-07-25 03:42:53] 2025-07-25 07:42:20,040 | INFO     | transexitcode: 0
[2025-07-25 03:42:53] 2025-07-25 07:42:20,040 | INFO     | exeerrorcode: 0
[2025-07-25 03:42:53] 2025-07-25 07:42:20,040 | INFO     | exeerrordiag: 
[2025-07-25 03:42:53] 2025-07-25 07:42:20,040 | INFO     | exitcode: 0
[2025-07-25 03:42:53] 2025-07-25 07:42:20,040 | INFO     | exitmsg: OK
[2025-07-25 03:42:53] 2025-07-25 07:42:20,041 | INFO     | cpuconsumptiontime: 64745 s
[2025-07-25 03:42:53] 2025-07-25 07:42:20,041 | INFO     | nevents: 400
[2025-07-25 03:42:53] 2025-07-25 07:42:20,041 | INFO     | neventsw: 0
[2025-07-25 03:42:53] 2025-07-25 07:42:20,041 | INFO     | pid: 28026
[2025-07-25 03:42:53] 2025-07-25 07:42:20,041 | INFO     | pgrp: 28026
[2025-07-25 03:42:53] 2025-07-25 07:42:20,041 | INFO     | corecount: 8
[2025-07-25 03:42:53] 2025-07-25 07:42:20,042 | INFO     | event service: False
[2025-07-25 03:42:53] 2025-07-25 07:42:20,042 | INFO     | sizes: {0: 2397298, 1: 2397497, 6: 2397759, 11: 2397787, 8923: 2425999, 8926: 2434997, 8927: 2435181, 8934: 2435375}
[2025-07-25 03:42:53] 2025-07-25 07:42:20,042 | INFO     | --------------------------------------------------
[2025-07-25 03:42:53] 2025-07-25 07:42:20,042 | INFO     | 
[2025-07-25 03:42:53] 2025-07-25 07:42:20,042 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-25 03:42:53] 2025-07-25 07:42:20,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 03:42:53] 2025-07-25 07:42:20,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,075 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 03:42:53] 2025-07-25 07:42:20,075 | INFO     | job 6744922888 has completed (purged errors)
[2025-07-25 03:42:53] 2025-07-25 07:42:20,075 | INFO     | overall cleanup function is called
[2025-07-25 03:42:53] 2025-07-25 07:42:21,083 | INFO     | --- collectZombieJob: --- 10, [28026]
[2025-07-25 03:42:53] 2025-07-25 07:42:21,083 | INFO     | zombie collector waiting for pid 28026
[2025-07-25 03:42:53] 2025-07-25 07:42:21,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 03:42:53] 2025-07-25 07:42:21,092 | INFO     | collected zombie processes
[2025-07-25 03:42:53] 2025-07-25 07:42:21,093 | INFO     | will attempt to kill all subprocesses of pid=28026
[2025-07-25 03:42:53] 2025-07-25 07:42:21,186 | INFO     | process IDs to be killed: [28026] (in reverse order)
[2025-07-25 03:42:53] 2025-07-25 07:42:21,245 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 03:42:53] 2025-07-25 07:42:21,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 03:42:53] 2025-07-25 07:42:21,251 | INFO     | did not find any defunct processes belonging to 28026
[2025-07-25 03:42:53] 2025-07-25 07:42:21,254 | INFO     | did not find any defunct processes belonging to 28026
[2025-07-25 03:42:53] 2025-07-25 07:42:21,254 | INFO     | ready for new job
[2025-07-25 03:42:53] 2025-07-25 07:42:21,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 03:42:53] 2025-07-25 07:42:21,257 | INFO     | ***************************************
[2025-07-25 03:42:53] 2025-07-25 07:42:21,257 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 03:42:53] 2025-07-25 07:42:21,258 | INFO     | ***************************************
[2025-07-25 03:42:53] 2025-07-25 07:42:21,258 | INFO     | 
[2025-07-25 03:42:53] 2025-07-25 07:42:21,258 | INFO     | architecture information:
[2025-07-25 03:42:53] 2025-07-25 07:42:21,259 | INFO     | executing command: cat /etc/os-release
[2025-07-25 03:42:53] 2025-07-25 07:42:21,277 | INFO     | cat /etc/os-release:
[2025-07-25 03:42:53] NAME="CentOS Linux"
[2025-07-25 03:42:53] VERSION="7 (Core)"
[2025-07-25 03:42:53] ID="centos"
[2025-07-25 03:42:53] ID_LIKE="rhel fedora"
[2025-07-25 03:42:53] VERSION_ID="7"
[2025-07-25 03:42:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 03:42:53] ANSI_COLOR="0;31"
[2025-07-25 03:42:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 03:42:53] HOME_URL="https://www.centos.org/"
[2025-07-25 03:42:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 03:42:53] 
[2025-07-25 03:42:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 03:42:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 03:42:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 03:42:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 03:42:53] 
[2025-07-25 03:42:53] 2025-07-25 07:42:21,278 | INFO     | ***************************************
[2025-07-25 03:42:53] 2025-07-25 07:42:21,781 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-25 03:42:53] 2025-07-25 07:42:21,802 | INFO     | sufficient remaining disk space (18742247424 B)
[2025-07-25 03:42:53] 2025-07-25 07:42:21,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 03:42:53] 2025-07-25 07:42:21,803 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 03:42:53] 2025-07-25 07:42:21,803 | INFO     | update_server=False
[2025-07-25 03:42:53] 2025-07-25 07:42:21,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 03:42:53] 2025-07-25 07:42:21,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 03:42:53] 2025-07-25 07:42:21,897 | INFO     | all data control threads have been joined
[2025-07-25 03:42:53] 2025-07-25 07:42:21,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 03:42:53] 2025-07-25 07:42:21,970 | INFO     | aborting loop
[2025-07-25 03:42:53] 2025-07-25 07:42:21,996 | INFO     | all job control threads have been joined
[2025-07-25 03:42:53] 2025-07-25 07:42:22,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 03:42:53] 2025-07-25 07:42:22,806 | INFO     | [job] retrieve thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:22,810 | INFO     | [job] queue monitor thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:22,903 | INFO     | [data] control thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:22,915 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:22,975 | INFO     | [job] job monitor thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:23,002 | INFO     | [job] control thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:23,020 | INFO     | all payload control threads have been joined
[2025-07-25 03:42:53] 2025-07-25 07:42:23,129 | INFO     | [job] validate thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:23,270 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:23,285 | INFO     | [data] copytool_in thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:23,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 03:42:53] 2025-07-25 07:42:23,687 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:23,917 | INFO     | [payload] validate_post thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:24,025 | INFO     | [payload] control thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:24,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:24,289 | INFO     | [data] copytool_out thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:24,352 | INFO     | [payload] failed_post thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:27,448 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 03:42:53] 2025-07-25 07:42:27,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256046102336)>', '<ExcThread(monitor, started 140255009158912)>']
[2025-07-25 03:42:53] 2025-07-25 07:42:32,622 | INFO     | all workflow threads have been joined
[2025-07-25 03:42:53] 2025-07-25 07:42:32,631 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 03:42:53] 2025-07-25 07:42:32,631 | INFO     | traces error code: 0
[2025-07-25 03:42:53] 2025-07-25 07:42:32,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 03:42:53] 2025-07-25 07:42:52,721 | INFO     | PID=21526 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 03:42:53] 2025-07-25 07:42:52,721 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 03:42:53] 2025-07-25 07:42:52,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 03:42:53] 2025-07-25 07:42:52,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 03:42:53] 2025-07-25 07:42:52,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 03:42:53] 2025-07-25 07:42:52,722 | INFO     | [monitor] control thread has ended
[2025-07-25 03:42:53] 2025-07-25 07:42:52,831 [wrapper] ==== pilot stdout END ====
[2025-07-25 03:42:53] 2025-07-25 07:42:52,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 03:42:53] 2025-07-25 07:42:52,840 [wrapper] pilotpid: 21526
[2025-07-25 03:42:53] 2025-07-25 07:42:52,844 [wrapper] Pilot exit status: 0
[2025-07-25 03:42:53] 2025-07-25 07:42:52,862 [wrapper] pandaids: 6744922888 6744922888
[2025-07-25 03:42:53] 2025-07-25 07:42:52,908 [wrapper] cleanup supervisor_pilot 10483 21527
[2025-07-25 03:42:53] 2025-07-25 07:42:52,913 [wrapper] Test setup, not cleaning
[2025-07-25 03:42:53] 2025-07-25 07:42:52,917 [wrapper] apfmon messages muted
[2025-07-25 03:42:53] 2025-07-25 07:42:52,921 [wrapper] ==== wrapper stdout END ====
[2025-07-25 03:42:53] 2025-07-25 07:42:52,926 [wrapper] ==== wrapper stderr END ====
[2025-07-25 03:42:53]  *** Error codes and diagnostics ***
[2025-07-25 03:42:53]     "exeErrorCode": 0,
[2025-07-25 03:42:53]     "exeErrorDiag": "",
[2025-07-25 03:42:53]     "pilotErrorCode": 0,
[2025-07-25 03:42:53]     "pilotErrorDiag": "",
[2025-07-25 03:42:53]  *** Listing of results directory ***
[2025-07-25 03:42:53] total 494520
[2025-07-25 03:42:53] drwx------ 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas    530466 Jul 24 15:05 pilot3.tar.gz
[2025-07-25 03:42:53] -rwx------ 1 boincer umatlas     36292 Jul 24 15:06 runpilot2-wrapper.sh
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas      5112 Jul 24 15:06 queuedata.json
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas       100 Jul 24 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 03:42:53] -rwxr-xr-x 1 boincer umatlas      7986 Jul 24 22:29 run_atlas
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas       105 Jul 24 22:29 job.xml
[2025-07-25 03:42:53] -rw-r--r-- 3 boincer umatlas 145147090 Jul 24 22:29 EVNT.45743347._000363.pool.root.1
[2025-07-25 03:42:53] -rw-r--r-- 3 boincer umatlas 145147090 Jul 24 22:29 ATLAS.root_0
[2025-07-25 03:42:53] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 22:29 start_atlas.sh
[2025-07-25 03:42:53] drwxrwx--x 2 boincer umatlas      4096 Jul 24 22:29 shared
[2025-07-25 03:42:53] -rw-r--r-- 2 boincer umatlas    542876 Jul 24 22:29 input.tar.gz
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas         0 Jul 24 22:29 boinc_lockfile
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas      2560 Jul 25 01:12 pandaJob.out
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas    979701 Jul 25 01:13 agis_schedconf.cvmfs.json
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas      5827 Jul 25 03:38 init_data.xml
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas 209914142 Jul 25 03:41 HITS.45743349._006933.pool.root.1
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas       532 Jul 25 03:41 boinc_task_state.xml
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas      1049 Jul 25 03:42 memory_monitor_summary.json
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas        96 Jul 25 03:42 pilot_heartbeat.json
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas   1593052 Jul 25 03:42 agis_ddmendpoints.agis.ALL.json
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas    340595 Jul 25 03:42 log.45743349._006933.job.log.tgz.1
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas      7846 Jul 25 03:42 heartbeat.json
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas        29 Jul 25 03:42 wrapper_checkpoint.txt
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas      8192 Jul 25 03:42 boinc_mmap_file
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas       745 Jul 25 03:42 pilotlog.txt
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas    812278 Jul 25 03:42 log.45743349._006933.job.log.1
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas       357 Jul 25 03:42 output.list
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas       620 Jul 25 03:42 runtime_log
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas   1167360 Jul 25 03:42 result.tar.gz
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas      8745 Jul 25 03:42 runtime_log.err
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas       786 Jul 25 03:42 bv6MDmUSGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0ENLDmh130Qo.diag
[2025-07-25 03:42:53] -rw-r--r-- 1 boincer umatlas     23041 Jul 25 03:42 stderr.txt
[2025-07-25 03:42:53] HITS file was successfully produced:
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas 209914142 Jul 25 03:41 shared/HITS.pool.root.1
[2025-07-25 03:42:53]  *** Contents of shared directory: ***
[2025-07-25 03:42:53] total 348436
[2025-07-25 03:42:53] -rw-r--r-- 3 boincer umatlas 145147090 Jul 24 22:29 ATLAS.root_0
[2025-07-25 03:42:53] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 22:29 start_atlas.sh
[2025-07-25 03:42:53] -rw-r--r-- 2 boincer umatlas    542876 Jul 24 22:29 input.tar.gz
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas 209914142 Jul 25 03:41 HITS.pool.root.1
[2025-07-25 03:42:53] -rw------- 1 boincer umatlas   1167360 Jul 25 03:42 result.tar.gz
03:42:54 (17797): run_atlas exited; CPU time 64592.992953
03:42:54 (17797): called boinc_finish(0)

</stderr_txt>
]]>

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