Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:41 (1460175): wrapper (7.7.26015): starting
11:02:41 (1460175): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 11:02:41] Arguments: --nthreads 4
[2025-07-27 11:02:41] Threads: 4
[2025-07-27 11:02:41] Checking for CVMFS
[2025-07-27 11:02:41] No cvmfs_config command found, will try listing directly
[2025-07-27 11:02:41] CVMFS is ok
[2025-07-27 11:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 11:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 11:02:41] Further information can be found at the LHC@home message board.
[2025-07-27 11:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:02:41] Checking for apptainer binary...
[2025-07-27 11:02:41] which: no apptainer in ((null))
[2025-07-27 11:02:41] apptainer is not installed, using version from CVMFS
[2025-07-27 11:02:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:02:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-07-27 11:02:41] apptainer works
[2025-07-27 11:02:41] Set ATHENA_PROC_NUMBER=4
[2025-07-27 11:02:41] Set ATHENA_CORE_NUMBER=4
[2025-07-27 11:02:41] Starting ATLAS job with PandaID=6744772839
[2025-07-27 11:02:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:57:52]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:57:52] 2025-07-27 11:57:03,689 | INFO     | intersect: -35032455296.17014
[2025-07-27 13:57:52] 2025-07-27 11:57:03,689 | INFO     | chi2: 1.4733515173223841
[2025-07-27 13:57:52] 2025-07-27 11:57:03,689 | INFO     | current chi2=1.4733515173223841 (change=-0.06575886270086616 %)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,689 | INFO     | right removable region: 165
[2025-07-27 13:57:52] 2025-07-27 11:57:03,690 | INFO     | sum of square deviations: 1418361477.5
[2025-07-27 13:57:52] 2025-07-27 11:57:03,690 | INFO     | sum of deviations: 5071929301.999998
[2025-07-27 13:57:52] 2025-07-27 11:57:03,690 | INFO     | mean x: 1753612346.5
[2025-07-27 13:57:52] 2025-07-27 11:57:03,691 | INFO     | mean y: 2323387.746987952
[2025-07-27 13:57:52] 2025-07-27 11:57:03,691 | INFO     | -- intersect: -6268431977.267022
[2025-07-27 13:57:52] 2025-07-27 11:57:03,691 | INFO     | intersect: -6268431977.267022
[2025-07-27 13:57:52] 2025-07-27 11:57:03,691 | INFO     | chi2: 0.0039745738977173236
[2025-07-27 13:57:52] 2025-07-27 11:57:03,691 | INFO     | current chi2=0.0039745738977173236 (change=99.73005847650413 %)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,691 | INFO     | sum of square deviations: 1294014960.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,692 | INFO     | sum of deviations: 4017879802.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,692 | INFO     | mean x: 1753612499.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,692 | INFO     | mean y: 2324657.1242236025
[2025-07-27 13:57:52] 2025-07-27 11:57:03,692 | INFO     | -- intersect: -5442592486.85288
[2025-07-27 13:57:52] 2025-07-27 11:57:03,692 | INFO     | intersect: -5442592486.85288
[2025-07-27 13:57:52] 2025-07-27 11:57:03,693 | INFO     | chi2: 0.0004144483581589742
[2025-07-27 13:57:52] 2025-07-27 11:57:03,693 | INFO     | current chi2=0.0004144483581589742 (change=89.57250842921803 %)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,693 | INFO     | sum of square deviations: 1177156955.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,694 | INFO     | sum of deviations: 3611475506.4999995
[2025-07-27 13:57:52] 2025-07-27 11:57:03,694 | INFO     | mean x: 1753612651.5
[2025-07-27 13:57:52] 2025-07-27 11:57:03,694 | INFO     | mean y: 2325193.9935897435
[2025-07-27 13:57:52] 2025-07-27 11:57:03,694 | INFO     | -- intersect: -5377695806.503129
[2025-07-27 13:57:52] 2025-07-27 11:57:03,694 | INFO     | intersect: -5377695806.503129
[2025-07-27 13:57:52] 2025-07-27 11:57:03,694 | INFO     | chi2: 0.00019551435331299712
[2025-07-27 13:57:52] 2025-07-27 11:57:03,694 | INFO     | current chi2=0.00019551435331299712 (change=52.825400447598916 %)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,695 | INFO     | sum of square deviations: 1067554900.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,695 | INFO     | sum of deviations: 3086921592.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,695 | INFO     | mean x: 1753612804.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,695 | INFO     | mean y: 2325921.158940397
[2025-07-27 13:57:52] 2025-07-27 11:57:03,696 | INFO     | -- intersect: -5068387752.372289
[2025-07-27 13:57:52] 2025-07-27 11:57:03,696 | INFO     | intersect: -5068387752.372289
[2025-07-27 13:57:52] 2025-07-27 11:57:03,696 | INFO     | chi2: 0.00010511033426947561
[2025-07-27 13:57:52] 2025-07-27 11:57:03,696 | INFO     | current chi2=0.00010511033426947561 (change=46.23907018161196 %)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,696 | INFO     | sum of square deviations: 964976232.5
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | sum of deviations: 2787482596.0000005
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | mean x: 1753612956.5
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | mean y: 2326366.5479452056
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | -- intersect: -5063254972.9011135
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | intersect: -5063254972.9011135
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | chi2: 0.00010498091508975175
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | current chi2=0.00010498091508975175 (change=0.12312697949572178 %)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,697 | INFO     | left removable region: 50
[2025-07-27 13:57:52] 2025-07-27 11:57:03,698 | INFO     | sum of square deviations: 471562330.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,698 | INFO     | sum of deviations: 1105933599.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,698 | INFO     | mean x: 1753613536.0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,698 | INFO     | mean y: 2328370.6782608693
[2025-07-27 13:57:52] 2025-07-27 11:57:03,698 | INFO     | -- intersect: -4110341377.822634
[2025-07-27 13:57:52] 2025-07-27 11:57:03,698 | INFO     | intersect: -4110341377.822634
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | chi2: 4.1003197292586673e-05
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | -- intersect: -4110341377.822634
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | current memory leak: 2.35 B/s (using 115 data points, chi2=0.00)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | could have reported an average CPU frequency of 2699 MHz (9 samples)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | ..............................
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | . Timing measurements:
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | . get job = 0 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | . initial setup = 1 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | . payload setup = 9 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | . stage-in = 0 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,699 | INFO     | . payload execution = 10407 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,700 | INFO     | . stage-out = 0 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,700 | INFO     | . log creation = 0 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,700 | INFO     | ..............................
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | 
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | job summary report
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | --------------------------------------------------
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | PanDA job id: 6744772839
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | task id: 45743349
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | errors: (none)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | pilot state: finished 
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | transexitcode: 0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | exeerrorcode: 0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | exeerrordiag: 
[2025-07-27 13:57:52] 2025-07-27 11:57:03,781 | INFO     | exitcode: 0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | exitmsg: OK
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | cpuconsumptiontime: 39761 s
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | nevents: 400
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | neventsw: 0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | pid: 1475723
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | pgrp: 1475723
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | corecount: 4
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | event service: False
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | sizes: {0: 2396640, 1: 2397508, 8: 2397770, 12: 2397798, 10421: 2427015, 10423: 2436037, 10425: 2436221, 10432: 2436479}
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | --------------------------------------------------
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | 
[2025-07-27 13:57:52] 2025-07-27 11:57:03,782 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-07-27 13:57:52] 2025-07-27 11:57:03,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,812 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,812 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:57:52] 2025-07-27 11:57:03,814 | INFO     | job 6744772839 has completed (purged errors)
[2025-07-27 13:57:52] 2025-07-27 11:57:03,814 | INFO     | overall cleanup function is called
[2025-07-27 13:57:52] 2025-07-27 11:57:04,824 | INFO     | --- collectZombieJob: --- 10, [1475723]
[2025-07-27 13:57:52] 2025-07-27 11:57:04,824 | INFO     | zombie collector waiting for pid 1475723
[2025-07-27 13:57:52] 2025-07-27 11:57:04,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:57:52] 2025-07-27 11:57:04,824 | INFO     | collected zombie processes
[2025-07-27 13:57:52] 2025-07-27 11:57:04,824 | INFO     | will attempt to kill all subprocesses of pid=1475723
[2025-07-27 13:57:52] 2025-07-27 11:57:06,091 | INFO     | PID=1464158 has CPU usage=20.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 13:57:52] 2025-07-27 11:57:06,092 | INFO     | .. there are 14 such processes running
[2025-07-27 13:57:52] 2025-07-27 11:57:06,267 | INFO     | process IDs to be killed: [1475723] (in reverse order)
[2025-07-27 13:57:52] 2025-07-27 11:57:06,490 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:57:52] 2025-07-27 11:57:06,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:57:52] 2025-07-27 11:57:06,515 | INFO     | did not find any defunct processes belonging to 1475723
[2025-07-27 13:57:52] 2025-07-27 11:57:06,534 | INFO     | did not find any defunct processes belonging to 1475723
[2025-07-27 13:57:52] 2025-07-27 11:57:06,534 | INFO     | ready for new job
[2025-07-27 13:57:52] 2025-07-27 11:57:06,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:57:52] 2025-07-27 11:57:06,537 | INFO     | ***************************************
[2025-07-27 13:57:52] 2025-07-27 11:57:06,537 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:57:52] 2025-07-27 11:57:06,537 | INFO     | ***************************************
[2025-07-27 13:57:52] 2025-07-27 11:57:06,537 | INFO     | 
[2025-07-27 13:57:52] 2025-07-27 11:57:06,545 | INFO     | architecture information:
[2025-07-27 13:57:52] 2025-07-27 11:57:06,545 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:57:52] 2025-07-27 11:57:06,566 | INFO     | cat /etc/os-release:
[2025-07-27 13:57:52] NAME="CentOS Linux"
[2025-07-27 13:57:52] VERSION="7 (Core)"
[2025-07-27 13:57:52] ID="centos"
[2025-07-27 13:57:52] ID_LIKE="rhel fedora"
[2025-07-27 13:57:52] VERSION_ID="7"
[2025-07-27 13:57:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:57:52] ANSI_COLOR="0;31"
[2025-07-27 13:57:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:57:52] HOME_URL="https://www.centos.org/"
[2025-07-27 13:57:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:57:52] 
[2025-07-27 13:57:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:57:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:57:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:57:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:57:52] 
[2025-07-27 13:57:52] 2025-07-27 11:57:06,566 | INFO     | ***************************************
[2025-07-27 13:57:52] 2025-07-27 11:57:07,069 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-07-27 13:57:52] 2025-07-27 11:57:07,094 | INFO     | sufficient remaining disk space (3266722136064 B)
[2025-07-27 13:57:52] 2025-07-27 11:57:07,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:57:52] 2025-07-27 11:57:07,094 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:57:52] 2025-07-27 11:57:07,094 | INFO     | update_server=False
[2025-07-27 13:57:52] 2025-07-27 11:57:07,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:57:52] 2025-07-27 11:57:07,095 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 13:57:52] 2025-07-27 11:57:07,095 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:57:52] 2025-07-27 11:57:07,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:57:52] 2025-07-27 11:57:07,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:57:52] 2025-07-27 11:57:07,205 | INFO     | all data control threads have been joined
[2025-07-27 13:57:52] 2025-07-27 11:57:07,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:57:52] 2025-07-27 11:57:07,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:57:52] 2025-07-27 11:57:07,988 | INFO     | all payload control threads have been joined
[2025-07-27 13:57:52] 2025-07-27 11:57:08,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:57:52] 2025-07-27 11:57:08,022 | INFO     | aborting loop
[2025-07-27 13:57:52] 2025-07-27 11:57:08,100 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:08,131 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:08,211 | INFO     | [data] control thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:08,305 | INFO     | all job control threads have been joined
[2025-07-27 13:57:52] 2025-07-27 11:57:08,352 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:08,454 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:08,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:57:52] 2025-07-27 11:57:08,808 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:08,847 | INFO     | [job] validate thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:08,994 | INFO     | [payload] control thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:09,027 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:09,148 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:09,308 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:09,311 | INFO     | [job] control thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:09,313 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:09,796 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:09,992 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:11,703 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:57:52] 2025-07-27 11:57:13,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22792673531712)>', '<ExcThread(monitor, started 22792426698496)>']
[2025-07-27 13:57:52] 2025-07-27 11:57:14,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:57:52] 2025-07-27 11:57:14,124 | INFO     | [monitor] control thread has ended
[2025-07-27 13:57:52] 2025-07-27 11:57:18,153 | INFO     | all workflow threads have been joined
[2025-07-27 13:57:52] 2025-07-27 11:57:18,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:57:52] 2025-07-27 11:57:18,153 | INFO     | traces error code: 0
[2025-07-27 13:57:52] 2025-07-27 11:57:18,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:57:52] 2025-07-27 11:57:18,272 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:57:52] 2025-07-27 11:57:18,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:57:52] 2025-07-27 11:57:18,280 [wrapper] pilotpid: 1464158
[2025-07-27 13:57:52] 2025-07-27 11:57:18,284 [wrapper] Pilot exit status: 0
[2025-07-27 13:57:52] 2025-07-27 11:57:18,301 [wrapper] pandaids: 6744772839
[2025-07-27 13:57:52] 2025-07-27 11:57:18,456 [wrapper] cleanup supervisor_pilot 2169149 1464159
[2025-07-27 13:57:52] 2025-07-27 11:57:18,461 [wrapper] Test setup, not cleaning
[2025-07-27 13:57:52] 2025-07-27 11:57:18,465 [wrapper] apfmon messages muted
[2025-07-27 13:57:52] 2025-07-27 11:57:18,470 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:57:52] 2025-07-27 11:57:18,473 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:57:52]  *** Error codes and diagnostics ***
[2025-07-27 13:57:52]     "exeErrorCode": 0,
[2025-07-27 13:57:52]     "exeErrorDiag": "",
[2025-07-27 13:57:52]     "pilotErrorCode": 0,
[2025-07-27 13:57:52]     "pilotErrorDiag": "",
[2025-07-27 13:57:52]  *** Listing of results directory ***
[2025-07-27 13:57:52] total 347732
[2025-07-27 13:57:52] -rwx------ 1 boinc boinc     36292 Jul 24 17:22 runpilot2-wrapper.sh
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc      5112 Jul 24 17:23 queuedata.json
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc    530466 Jul 24 17:24 pilot3.tar.gz
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc       100 Jul 27 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:57:52] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 11:02 run_atlas
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc       105 Jul 27 11:02 job.xml
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc      6690 Jul 27 11:02 init_data.xml
[2025-07-27 13:57:52] -rw-r--r-- 2 boinc boinc 146635872 Jul 27 11:02 EVNT.45743347._000125.pool.root.1
[2025-07-27 13:57:52] -rw-r--r-- 2 boinc boinc     15095 Jul 27 11:02 start_atlas.sh
[2025-07-27 13:57:52] drwxrwx--x 2 boinc boinc      4096 Jul 27 11:02 shared
[2025-07-27 13:57:52] -rw-r--r-- 2 boinc boinc    542878 Jul 27 11:02 input.tar.gz
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc         0 Jul 27 11:02 boinc_lockfile
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc      2560 Jul 27 11:02 pandaJob.out
[2025-07-27 13:57:52] -rw------- 1 boinc boinc    980109 Jul 27 11:02 agis_schedconf.cvmfs.json
[2025-07-27 13:57:52] -rw------- 1 boinc boinc   1593052 Jul 27 11:02 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:57:52] drwx------ 4 boinc boinc      4096 Jul 27 11:02 pilot3
[2025-07-27 13:57:52] -rw------- 1 boinc boinc 202999118 Jul 27 13:56 HITS.45743349._002167.pool.root.1
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc       529 Jul 27 13:56 boinc_task_state.xml
[2025-07-27 13:57:52] -rw------- 1 boinc boinc      1033 Jul 27 13:56 memory_monitor_summary.json
[2025-07-27 13:57:52] -rw------- 1 boinc boinc    299877 Jul 27 13:56 log.45743349._002167.job.log.tgz.1
[2025-07-27 13:57:52] -rw------- 1 boinc boinc      7782 Jul 27 13:57 heartbeat.json
[2025-07-27 13:57:52] -rw------- 1 boinc boinc        95 Jul 27 13:57 pilot_heartbeat.json
[2025-07-27 13:57:52] -rw------- 1 boinc boinc      4492 Jul 27 13:57 pilotlog.txt
[2025-07-27 13:57:52] -rw------- 1 boinc boinc    979418 Jul 27 13:57 log.45743349._002167.job.log.1
[2025-07-27 13:57:52] -rw------- 1 boinc boinc       357 Jul 27 13:57 output.list
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc       620 Jul 27 13:57 runtime_log
[2025-07-27 13:57:52] -rw------- 1 boinc boinc   1300480 Jul 27 13:57 result.tar.gz
[2025-07-27 13:57:52] -rw------- 1 boinc boinc       665 Jul 27 13:57 QHtMDmQxCz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgYMLDmo59SBo.diag
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc      9042 Jul 27 13:57 runtime_log.err
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc        27 Jul 27 13:57 wrapper_checkpoint.txt
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc      8192 Jul 27 13:57 boinc_mmap_file
[2025-07-27 13:57:52] -rw-r--r-- 1 boinc boinc     20798 Jul 27 13:57 stderr.txt
[2025-07-27 13:57:52] HITS file was successfully produced:
[2025-07-27 13:57:52] -rw------- 1 boinc boinc 202999118 Jul 27 13:56 shared/HITS.pool.root.1
[2025-07-27 13:57:52]  *** Contents of shared directory: ***
[2025-07-27 13:57:52] total 343268
[2025-07-27 13:57:52] -rw-r--r-- 2 boinc boinc 146635872 Jul 27 11:02 ATLAS.root_0
[2025-07-27 13:57:52] -rw-r--r-- 2 boinc boinc     15095 Jul 27 11:02 start_atlas.sh
[2025-07-27 13:57:52] -rw-r--r-- 2 boinc boinc    542878 Jul 27 11:02 input.tar.gz
[2025-07-27 13:57:52] -rw------- 1 boinc boinc 202999118 Jul 27 13:56 HITS.pool.root.1
[2025-07-27 13:57:52] -rw------- 1 boinc boinc   1300480 Jul 27 13:57 result.tar.gz
13:57:53 (1460175): run_atlas exited; CPU time 40304.150390
13:57:53 (1460175): called boinc_finish(0)

</stderr_txt>
]]>

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