Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:01:35 (2575392): wrapper (7.7.26015): starting
22:01:35 (2575392): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 22:01:35] Arguments: --nthreads 8
[2025-07-24 22:01:35] Threads: 8
[2025-07-24 22:01:35] Checking for CVMFS
[2025-07-24 22:01:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 22:01:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 22:01:35] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 22:01:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 22:01:35] 2.13.1.0 2445429 826 64516 148721 3 188 33792902 40960001 12916 16776704 0 11000162 99.999 30968 69434 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 22:01:35] CVMFS is ok
[2025-07-24 22:01:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 22:01:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 22:01:35] Further information can be found at the LHC@home message board.
[2025-07-24 22:01:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 22:01:35] Checking for apptainer binary...
[2025-07-24 22:01:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 22:01:35] Running /usr/bin/apptainer --version
[2025-07-24 22:01:35] apptainer version 1.4.1-1.el9
[2025-07-24 22:01:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 22:01:35] c-208-40.aglt2.org
[2025-07-24 22:01:35] apptainer works
[2025-07-24 22:01:35] Set ATHENA_PROC_NUMBER=8
[2025-07-24 22:01:35] Set ATHENA_CORE_NUMBER=8
[2025-07-24 22:01:35] Starting ATLAS job with PandaID=6741857002
[2025-07-24 22:01:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 23:19:40]  *** The last 200 lines of the pilot log: ***
[2025-07-24 23:19:40]  mtime=0
[2025-07-24 23:19:40]  protocol_id=None
[2025-07-24 23:19:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 23:19:40]  replicas=None
[2025-07-24 23:19:40]  scope=mc23_13p6TeV
[2025-07-24 23:19:40]  status=None
[2025-07-24 23:19:40]  status_code=0
[2025-07-24 23:19:40]  storage_token=
[2025-07-24 23:19:40]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6741857002/log.45697490._002959.job.log.tgz.1
[2025-07-24 23:19:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/53/log.45697490._002959.job.log.tgz.1
[2025-07-24 23:19:40]  workdir=None
[2025-07-24 23:19:40] ]
[2025-07-24 23:19:40] 2025-07-25 03:19:01,204 | INFO     | transferring file log.45697490._002959.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6741857002/log.45697490._002959.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-24 23:19:40] 2025-07-25 03:19:01,204 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6741857002/log.45697490._002959.job.log.tgz.1 /tmp/boinchome/slots/8/log.45697490._002959.job
[2025-07-24 23:19:40] 2025-07-25 03:19:01,220 | INFO     | adding to output.list: log.45697490._002959.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/53/log.45697490._002959.job.log.tg
[2025-07-24 23:19:40] 2025-07-25 03:19:01,221 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 23:19:40] 2025-07-25 03:19:01,221 | INFO     | summary of transferred files:
[2025-07-24 23:19:40] 2025-07-25 03:19:01,221 | INFO     |  -- lfn=log.45697490._002959.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 23:19:40] 2025-07-25 03:19:01,221 | INFO     | stage-out finished correctly
[2025-07-24 23:19:40] 2025-07-25 03:19:01,691 | INFO     | PID=2579478 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-24 23:19:40] 2025-07-25 03:19:01,691 | INFO     | .. there are 16 such processes running
[2025-07-24 23:19:40] 2025-07-25 03:19:02,438 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 23:19:40] 2025-07-25 03:19:03,109 | INFO     | monitor loop #337: job 0:6741857002 is in state 'finished'
[2025-07-24 23:19:40] 2025-07-25 03:19:03,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 23:19:40] 2025-07-25 03:19:03,295 | INFO     | job 6741857002 has state=finished
[2025-07-24 23:19:40] 2025-07-25 03:19:03,295 | INFO     | preparing for final server update for job 6741857002 in state='finished'
[2025-07-24 23:19:40] 2025-07-25 03:19:03,347 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-24 23:19:40] 2025-07-25 03:19:03,347 | INFO     | this job has now completed (state=finished)
[2025-07-24 23:19:40] 2025-07-25 03:19:03,347 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 23:19:40] 2025-07-25 03:19:03,347 | INFO     | log transfer has been attempted: DONE
[2025-07-24 23:19:40] 2025-07-25 03:19:03,347 | INFO     | job 6741857002 has finished - writing final server update
[2025-07-24 23:19:40] 2025-07-25 03:19:03,347 | INFO     | total number of processed events: 400 (read)
[2025-07-24 23:19:40] 2025-07-25 03:19:03,348 | INFO     | executing command: lscpu
[2025-07-24 23:19:40] 2025-07-25 03:19:03,402 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 23:19:40] 2025-07-25 03:19:05,612 | INFO     | monitor loop #338: job 0:6741857002 is in state 'finished'
[2025-07-24 23:19:40] 2025-07-25 03:19:05,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 23:19:40] 2025-07-25 03:19:06,854 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-24 23:19:40] 2025-07-25 03:19:06,860 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3748.186750000001
[2025-07-24 23:19:40] 2025-07-25 03:19:06,873 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6741857002/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 23:19:40] 2025-07-25 03:19:06,874 | INFO     | extracted standard info from prmon json
[2025-07-24 23:19:40] 2025-07-25 03:19:06,874 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 23:19:40] 2025-07-25 03:19:06,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 23:19:40] 2025-07-25 03:19:06,874 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 23:19:40] 2025-07-25 03:19:06,874 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 23:19:40] 2025-07-25 03:19:06,875 | INFO     | fitting pss+swap vs Time
[2025-07-24 23:19:40] 2025-07-25 03:19:06,875 | INFO     | sum of square deviations: 101843770.0
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | sum of deviations: 992074598.0000001
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | mean x: 1753411308.0
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | mean y: 2586498.884057971
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | -- intersect: -17077641565.265121
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | intersect: -17077641565.265121
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | chi2: 0.0006644549649732506
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | -- intersect: -17077641565.265121
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | current memory leak: 9.74 B/s (using 69 data points, chi2=0.00)
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | could have reported an average CPU frequency of 3769 MHz (6 samples)
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | ..............................
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | . Timing measurements:
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | . get job = 0 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | . initial setup = 2 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | . payload setup = 5 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | . stage-in = 0 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,876 | INFO     | . payload execution = 4612 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,877 | INFO     | . stage-out = 0 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,877 | INFO     | . log creation = 0 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,877 | INFO     | ..............................
[2025-07-24 23:19:40] 2025-07-25 03:19:06,934 | INFO     | 
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | job summary report
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | --------------------------------------------------
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | PanDA job id: 6741857002
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | task id: 45697490
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | errors: (none)
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | pilot state: finished 
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | transexitcode: 0
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | exeerrorcode: 0
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | exeerrordiag: 
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | exitcode: 0
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | exitmsg: OK
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | cpuconsumptiontime: 34781 s
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | nevents: 400
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | neventsw: 0
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | pid: 2586091
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | pgrp: 2586091
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | corecount: 8
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | event service: False
[2025-07-24 23:19:40] 2025-07-25 03:19:06,935 | INFO     | sizes: {0: 2397515, 4: 2397777, 11: 2397805, 4621: 2424087, 4622: 2433140, 4624: 2433140, 4628: 2433462}
[2025-07-24 23:19:40] 2025-07-25 03:19:06,936 | INFO     | --------------------------------------------------
[2025-07-24 23:19:40] 2025-07-25 03:19:06,936 | INFO     | 
[2025-07-24 23:19:40] 2025-07-25 03:19:06,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-07-24 23:19:40] 2025-07-25 03:19:06,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 23:19:40] 2025-07-25 03:19:06,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 23:19:40] 2025-07-25 03:19:06,954 | INFO     | job 6741857002 has completed (purged errors)
[2025-07-24 23:19:40] 2025-07-25 03:19:06,954 | INFO     | overall cleanup function is called
[2025-07-24 23:19:40] 2025-07-25 03:19:07,961 | INFO     | --- collectZombieJob: --- 10, [2586091]
[2025-07-24 23:19:40] 2025-07-25 03:19:07,961 | INFO     | zombie collector waiting for pid 2586091
[2025-07-24 23:19:40] 2025-07-25 03:19:07,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 23:19:40] 2025-07-25 03:19:07,961 | INFO     | collected zombie processes
[2025-07-24 23:19:40] 2025-07-25 03:19:07,962 | INFO     | will attempt to kill all subprocesses of pid=2586091
[2025-07-24 23:19:40] 2025-07-25 03:19:08,302 | INFO     | process IDs to be killed: [2586091] (in reverse order)
[2025-07-24 23:19:40] 2025-07-25 03:19:08,415 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 23:19:40] 2025-07-25 03:19:08,415 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 23:19:40] 2025-07-25 03:19:08,431 | INFO     | did not find any defunct processes belonging to 2586091
[2025-07-24 23:19:40] 2025-07-25 03:19:08,443 | INFO     | did not find any defunct processes belonging to 2586091
[2025-07-24 23:19:40] 2025-07-25 03:19:08,443 | INFO     | ready for new job
[2025-07-24 23:19:40] 2025-07-25 03:19:08,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 23:19:40] 2025-07-25 03:19:08,444 | INFO     | ***************************************
[2025-07-24 23:19:40] 2025-07-25 03:19:08,444 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 23:19:40] 2025-07-25 03:19:08,444 | INFO     | ***************************************
[2025-07-24 23:19:40] 2025-07-25 03:19:08,444 | INFO     | 
[2025-07-24 23:19:40] 2025-07-25 03:19:08,449 | INFO     | architecture information:
[2025-07-24 23:19:40] 2025-07-25 03:19:08,449 | INFO     | executing command: cat /etc/os-release
[2025-07-24 23:19:40] 2025-07-25 03:19:08,461 | INFO     | cat /etc/os-release:
[2025-07-24 23:19:40] NAME="CentOS Linux"
[2025-07-24 23:19:40] VERSION="7 (Core)"
[2025-07-24 23:19:40] ID="centos"
[2025-07-24 23:19:40] ID_LIKE="rhel fedora"
[2025-07-24 23:19:40] VERSION_ID="7"
[2025-07-24 23:19:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 23:19:40] ANSI_COLOR="0;31"
[2025-07-24 23:19:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 23:19:40] HOME_URL="https://www.centos.org/"
[2025-07-24 23:19:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 23:19:40] 
[2025-07-24 23:19:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 23:19:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 23:19:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 23:19:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 23:19:40] 
[2025-07-24 23:19:40] 2025-07-25 03:19:08,462 | INFO     | ***************************************
[2025-07-24 23:19:40] 2025-07-25 03:19:08,964 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-07-24 23:19:40] 2025-07-25 03:19:08,983 | INFO     | sufficient remaining disk space (165392941056 B)
[2025-07-24 23:19:40] 2025-07-25 03:19:08,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 23:19:40] 2025-07-25 03:19:08,984 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 23:19:40] 2025-07-25 03:19:08,984 | INFO     | update_server=False
[2025-07-24 23:19:40] 2025-07-25 03:19:08,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 23:19:40] 2025-07-25 03:19:08,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 23:19:40] 2025-07-25 03:19:09,036 | INFO     | all job control threads have been joined
[2025-07-24 23:19:40] 2025-07-25 03:19:09,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 23:19:40] 2025-07-25 03:19:09,121 | INFO     | aborting loop
[2025-07-24 23:19:40] 2025-07-25 03:19:09,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 23:19:40] 2025-07-25 03:19:09,378 | INFO     | all payload control threads have been joined
[2025-07-24 23:19:40] 2025-07-25 03:19:09,687 | INFO     | all data control threads have been joined
[2025-07-24 23:19:40] 2025-07-25 03:19:09,989 | INFO     | [job] retrieve thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:09,998 | INFO     | [data] copytool_in thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:10,041 | INFO     | [job] control thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:10,126 | INFO     | [job] job monitor thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:10,312 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:10,383 | INFO     | [payload] control thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:10,532 | INFO     | [payload] failed_post thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:10,692 | INFO     | [data] control thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:10,886 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:11,001 | INFO     | [job] validate thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:11,151 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:11,282 | INFO     | [payload] validate_post thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:11,291 | INFO     | [data] copytool_out thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:11,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 23:19:40] 2025-07-25 03:19:12,944 | INFO     | [job] queue monitor thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:12,990 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:19,784 | INFO     | job.realtimelogging is not enabled
[2025-07-24 23:19:40] 2025-07-25 03:19:20,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 23:19:40] 2025-07-25 03:19:22,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831754524480)>', '<ExcThread(monitor, started 139831409616640)>']
[2025-07-24 23:19:40] 2025-07-25 03:19:27,391 | INFO     | all workflow threads have been joined
[2025-07-24 23:19:40] 2025-07-25 03:19:27,391 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 23:19:40] 2025-07-25 03:19:27,391 | INFO     | traces error code: 0
[2025-07-24 23:19:40] 2025-07-25 03:19:27,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 23:19:40] 2025-07-25 03:19:40,217 | INFO     | PID=2579478 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 23:19:40] 2025-07-25 03:19:40,218 | INFO     | .. there are 16 such processes running
[2025-07-24 23:19:40] 2025-07-25 03:19:40,218 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 23:19:40] 2025-07-25 03:19:40,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 23:19:40] 2025-07-25 03:19:40,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 23:19:40] 2025-07-25 03:19:40,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 23:19:40] 2025-07-25 03:19:40,219 | INFO     | [monitor] control thread has ended
[2025-07-24 23:19:40] 2025-07-25 03:19:40,331 [wrapper] ==== pilot stdout END ====
[2025-07-24 23:19:40] 2025-07-25 03:19:40,334 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 23:19:40] 2025-07-25 03:19:40,336 [wrapper] pilotpid: 2579478
[2025-07-24 23:19:40] 2025-07-25 03:19:40,339 [wrapper] Pilot exit status: 0
[2025-07-24 23:19:40] 2025-07-25 03:19:40,349 [wrapper] pandaids: 6741857002
[2025-07-24 23:19:40] 2025-07-25 03:19:40,430 [wrapper] cleanup supervisor_pilot 3117584 2579479
[2025-07-24 23:19:40] 2025-07-25 03:19:40,433 [wrapper] Test setup, not cleaning
[2025-07-24 23:19:40] 2025-07-25 03:19:40,436 [wrapper] apfmon messages muted
[2025-07-24 23:19:40] 2025-07-25 03:19:40,439 [wrapper] ==== wrapper stdout END ====
[2025-07-24 23:19:40] 2025-07-25 03:19:40,442 [wrapper] ==== wrapper stderr END ====
[2025-07-24 23:19:40]  *** Error codes and diagnostics ***
[2025-07-24 23:19:40]     "exeErrorCode": 0,
[2025-07-24 23:19:40]     "exeErrorDiag": "",
[2025-07-24 23:19:40]     "pilotErrorCode": 0,
[2025-07-24 23:19:40]     "pilotErrorDiag": "",
[2025-07-24 23:19:40]  *** Listing of results directory ***
[2025-07-24 23:19:40] total 642820
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 22 19:16 pilot3.tar.gz
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 22 19:31 queuedata.json
[2025-07-24 23:19:40] -rwx------. 1 boincer umatlas     36292 Jul 22 19:35 runpilot2-wrapper.sh
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas       100 Jul 24 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 23:19:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 22:01 run_atlas
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas       105 Jul 24 22:01 job.xml
[2025-07-24 23:19:40] -rw-r--r--. 2 boincer umatlas 345495060 Jul 24 22:01 EVNT.45697488._000135.pool.root.1
[2025-07-24 23:19:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 22:01 start_atlas.sh
[2025-07-24 23:19:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 22:01 shared
[2025-07-24 23:19:40] -rw-r--r--. 2 boincer umatlas    542900 Jul 24 22:01 input.tar.gz
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas         0 Jul 24 22:01 boinc_lockfile
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas      2590 Jul 24 22:01 pandaJob.out
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas    979709 Jul 24 22:01 agis_schedconf.cvmfs.json
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas   1593052 Jul 24 22:01 agis_ddmendpoints.agis.ALL.json
[2025-07-24 23:19:40] drwx------. 4 boincer umatlas      4096 Jul 24 22:01 pilot3
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas       530 Jul 24 23:18 boinc_task_state.xml
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas 307359471 Jul 24 23:18 HITS.45697490._002959.pool.root.1
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas      7172 Jul 24 23:18 init_data.xml
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas      1030 Jul 24 23:18 memory_monitor_summary.json
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas    300422 Jul 24 23:19 log.45697490._002959.job.log.tgz.1
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas      7764 Jul 24 23:19 heartbeat.json
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas        27 Jul 24 23:19 wrapper_checkpoint.txt
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 23:19 boinc_mmap_file
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas        95 Jul 24 23:19 pilot_heartbeat.json
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas       823 Jul 24 23:19 pilotlog.txt
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas    456047 Jul 24 23:19 log.45697490._002959.job.log.1
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas       357 Jul 24 23:19 output.list
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas       620 Jul 24 23:19 runtime_log
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas    778240 Jul 24 23:19 result.tar.gz
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas      8660 Jul 24 23:19 runtime_log.err
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas       652 Jul 24 23:19 rHfLDmAhby7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7SKLDmBxbVSn.diag
[2025-07-24 23:19:40] -rw-r--r--. 1 boincer umatlas     21781 Jul 24 23:19 stderr.txt
[2025-07-24 23:19:40] HITS file was successfully produced:
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas 307359471 Jul 24 23:18 shared/HITS.pool.root.1
[2025-07-24 23:19:40]  *** Contents of shared directory: ***
[2025-07-24 23:19:40] total 638872
[2025-07-24 23:19:40] -rw-r--r--. 2 boincer umatlas 345495060 Jul 24 22:01 ATLAS.root_0
[2025-07-24 23:19:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 22:01 start_atlas.sh
[2025-07-24 23:19:40] -rw-r--r--. 2 boincer umatlas    542900 Jul 24 22:01 input.tar.gz
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas 307359471 Jul 24 23:18 HITS.pool.root.1
[2025-07-24 23:19:40] -rw-------. 1 boincer umatlas    778240 Jul 24 23:19 result.tar.gz
23:19:41 (2575392): run_atlas exited; CPU time 34889.186375
23:19:41 (2575392): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN