Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:07:55 (161289): wrapper (7.7.26015): starting
18:07:55 (161289): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 18:07:55] Arguments: --nthreads 12
[2025-07-24 18:07:55] Threads: 12
[2025-07-24 18:07:55] Checking for CVMFS
[2025-07-24 18:07:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 18:07:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 18:07:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 18:07:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 18:07:57] 2.11.5.0 7120 33581 225148 148720 2 488 28435346 45568001 23311 130560 0 285780863 99.762 199134934 29810 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-24 18:07:57] CVMFS is ok
[2025-07-24 18:07:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 18:07:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 18:07:57] Further information can be found at the LHC@home message board.
[2025-07-24 18:07:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 18:07:57] Checking for apptainer binary...
[2025-07-24 18:07:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 18:07:57] Running /usr/bin/apptainer --version
[2025-07-24 18:07:57] apptainer version 1.4.1-1.el9
[2025-07-24 18:07:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 18:07:58] wns0038.triumf.lcg
[2025-07-24 18:07:58] apptainer works
[2025-07-24 18:07:58] Set ATHENA_PROC_NUMBER=12
[2025-07-24 18:07:58] Set ATHENA_CORE_NUMBER=12
[2025-07-24 18:07:58] Starting ATLAS job with PandaID=6741693427
[2025-07-24 18:07:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 18:13:01]  *** The last 200 lines of the pilot log: ***
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | WARNING  | wrong length of table data, x=[1753405786.0], y=[1385.0] (must be same and length>=4)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | ..............................
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . Timing measurements:
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . get job = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . initial setup = 2 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . payload setup = 20 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . stage-in = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . payload execution = 49 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . stage-out = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . log creation = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | ..............................
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 18:13:01] 2025-07-25 01:12:27,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741693427/pilotlog.txt
[2025-07-24 18:13:01] 2025-07-25 01:12:27,833 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 18:13:01] - Log from pilotlog.txt -
[2025-07-24 18:13:01] 2025-07-25 01:12:27,788 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741693427/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | INFO     | extracted standard info from prmon json
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | WARNING  | wrong length of table data, x=[1753405786.0], y=[1385.0] (must be same and length>=4)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | ..............................
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . Timing measurements:
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . get job = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . initial setup = 2 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . payload setup = 20 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . stage-in = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . payload execution = 49 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . stage-out = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . log creation = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | ..............................
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 18:13:01] 2025-07-25 01:12:27,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741693427/pilotlog.txt
[2025-07-24 18:13:01] 2025-07-25 01:12:27,834 | WARNING  | 
[2025-07-24 18:13:01] [begin log extracts]
[2025-07-24 18:13:01] - Log from pilotlog.txt -
[2025-07-24 18:13:01] 2025-07-25 01:12:27,788 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6741693427/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | INFO     | extracted standard info from prmon json
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 18:13:01] 2025-07-25 01:12:27,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | WARNING  | wrong length of table data, x=[1753405786.0], y=[1385.0] (must be same and length>=4)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | could have reported an average CPU frequency of 2655 MHz (4 samples)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | ..............................
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . Timing measurements:
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . get job = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . initial setup = 2 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . payload setup = 20 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,790 | INFO     | . stage-in = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . payload execution = 49 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . stage-out = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | . log creation = 0 s
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | ..............................
[2025-07-24 18:13:01] 2025-07-25 01:12:27,791 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 18:13:01] 2025-07-25 01:12:27,797 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6741693427/pilotlog.txt
[2025-07-24 18:13:01] [end log extracts]
[2025-07-24 18:13:01] 2025-07-25 01:12:27,834 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 18:13:01] 2025-07-25 01:12:27,834 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | 
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | job summary report
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | --------------------------------------------------
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | PanDA job id: 6741693427
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | task id: 45697541
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 18:10:05,209 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 18:13:01] 2025-07-25 01:12:28,023 | INFO     | pilot state: failed 
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | transexitcode: 65
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | exeerrorcode: 65
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | exitcode: 65
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | cpuconsumptiontime: 17 s
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | nevents: 0
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | neventsw: 0
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | pid: 176314
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | pgrp: 176314
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | corecount: 12
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | event service: False
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | sizes: {0: 2397507, 1: 2397507, 12: 2397825, 22: 2397825, 73: 2421131, 75: 2425423, 78: 2425579, 207: 2425745}
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | --------------------------------------------------
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | 
[2025-07-24 18:13:01] 2025-07-25 01:12:28,024 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 18:13:01] 2025-07-25 01:12:28,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,103 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,103 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 18:13:01] 2025-07-25 01:12:28,103 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,103 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 18:13:01] 2025-07-25 01:12:28,108 | INFO     | job 6741693427 has completed (purged errors)
[2025-07-24 18:13:01] 2025-07-25 01:12:28,108 | INFO     | overall cleanup function is called
[2025-07-24 18:13:01] 2025-07-25 01:12:29,115 | INFO     | --- collectZombieJob: --- 10, [176314]
[2025-07-24 18:13:01] 2025-07-25 01:12:29,116 | INFO     | zombie collector waiting for pid 176314
[2025-07-24 18:13:01] 2025-07-25 01:12:29,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 18:13:01] 2025-07-25 01:12:29,116 | INFO     | collected zombie processes
[2025-07-24 18:13:01] 2025-07-25 01:12:29,116 | INFO     | will attempt to kill all subprocesses of pid=176314
[2025-07-24 18:13:01] 2025-07-25 01:12:29,995 | INFO     | process IDs to be killed: [176314] (in reverse order)
[2025-07-24 18:13:01] 2025-07-25 01:12:30,084 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 18:13:01] 2025-07-25 01:12:30,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 18:13:01] 2025-07-25 01:12:30,094 | INFO     | did not find any defunct processes belonging to 176314
[2025-07-24 18:13:01] 2025-07-25 01:12:30,104 | INFO     | did not find any defunct processes belonging to 176314
[2025-07-24 18:13:01] 2025-07-25 01:12:30,105 | INFO     | ready for new job
[2025-07-24 18:13:01] 2025-07-25 01:12:30,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 18:13:01] 2025-07-25 01:12:30,106 | INFO     | ***************************************
[2025-07-24 18:13:01] 2025-07-25 01:12:30,106 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 18:13:01] 2025-07-25 01:12:30,106 | INFO     | ***************************************
[2025-07-24 18:13:01] 2025-07-25 01:12:30,106 | INFO     | 
[2025-07-24 18:13:01] 2025-07-25 01:12:30,108 | INFO     | architecture information:
[2025-07-24 18:13:01] 2025-07-25 01:12:30,108 | INFO     | executing command: cat /etc/os-release
[2025-07-24 18:13:01] 2025-07-25 01:12:30,122 | INFO     | cat /etc/os-release:
[2025-07-24 18:13:01] NAME="CentOS Linux"
[2025-07-24 18:13:01] VERSION="7 (Core)"
[2025-07-24 18:13:01] ID="centos"
[2025-07-24 18:13:01] ID_LIKE="rhel fedora"
[2025-07-24 18:13:01] VERSION_ID="7"
[2025-07-24 18:13:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 18:13:01] ANSI_COLOR="0;31"
[2025-07-24 18:13:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 18:13:01] HOME_URL="https://www.centos.org/"
[2025-07-24 18:13:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 18:13:01] 
[2025-07-24 18:13:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 18:13:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 18:13:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 18:13:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 18:13:01] 
[2025-07-24 18:13:01] 2025-07-25 01:12:30,123 | INFO     | ***************************************
[2025-07-24 18:13:01] 2025-07-25 01:12:30,635 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 18:13:01] 2025-07-25 01:12:30,706 | INFO     | sufficient remaining disk space (1920350552064 B)
[2025-07-24 18:13:01] 2025-07-25 01:12:30,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 18:13:01] 2025-07-25 01:12:30,707 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 18:13:01] 2025-07-25 01:12:30,707 | INFO     | update_server=False
[2025-07-24 18:13:01] 2025-07-25 01:12:30,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 18:13:01] 2025-07-25 01:12:30,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 18:13:01] 2025-07-25 01:12:31,128 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-24 18:13:01] 2025-07-25 01:12:31,128 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-24 18:13:01] 2025-07-25 01:12:31,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 18:13:01] 2025-07-25 01:12:31,128 | INFO     | will abort loop
[2025-07-24 18:13:01] 2025-07-25 01:12:31,163 | INFO     | all data control threads have been joined
[2025-07-24 18:13:01] 2025-07-25 01:12:31,192 | INFO     | all payload control threads have been joined
[2025-07-24 18:13:01] 2025-07-25 01:12:31,318 | INFO     | all job control threads have been joined
[2025-07-24 18:13:01] 2025-07-25 01:12:31,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 18:13:01] 2025-07-25 01:12:31,713 | INFO     | [job] retrieve thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:31,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,134 | INFO     | [job] job monitor thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,169 | INFO     | [data] control thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,198 | INFO     | [payload] control thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,324 | INFO     | [job] control thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,431 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,448 | INFO     | [payload] failed_post thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,703 | INFO     | [data] copytool_in thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,715 | INFO     | [data] copytool_out thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,824 | INFO     | [job] validate thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:32,875 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:33,003 | INFO     | [payload] validate_post thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:33,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 18:13:01] 2025-07-25 01:12:33,046 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:34,046 | INFO     | [job] queue monitor thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:35,344 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 18:13:01] 2025-07-25 01:12:36,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425604872000)>', '<ExcThread(monitor, started 140425214023424)>']
[2025-07-24 18:13:01] 2025-07-25 01:12:41,702 | INFO     | all workflow threads have been joined
[2025-07-24 18:13:01] 2025-07-25 01:12:41,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 18:13:01] 2025-07-25 01:12:41,702 | INFO     | traces error code: 0
[2025-07-24 18:13:01] 2025-07-25 01:12:41,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 18:13:01] 2025-07-25 01:13:00,927 | INFO     | PID=164877 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 18:13:01] 2025-07-25 01:13:00,927 | INFO     | .. there are 42 such processes running
[2025-07-24 18:13:01] 2025-07-25 01:13:00,927 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 18:13:01] 2025-07-25 01:13:00,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 18:13:01] 2025-07-25 01:13:00,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 18:13:01] 2025-07-25 01:13:00,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 18:13:01] 2025-07-25 01:13:00,928 | INFO     | [monitor] control thread has ended
[2025-07-24 18:13:01] 2025-07-25 01:13:01,041 [wrapper] ==== pilot stdout END ====
[2025-07-24 18:13:01] 2025-07-25 01:13:01,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 18:13:01] 2025-07-25 01:13:01,045 [wrapper] pilotpid: 164877
[2025-07-24 18:13:01] 2025-07-25 01:13:01,047 [wrapper] Pilot exit status: 0
[2025-07-24 18:13:01] 2025-07-25 01:13:01,056 [wrapper] pandaids: 6741693427
[2025-07-24 18:13:01] 2025-07-25 01:13:01,117 [wrapper] cleanup supervisor_pilot  164883 164878
[2025-07-24 18:13:01] 2025-07-25 01:13:01,119 [wrapper] Test setup, not cleaning
[2025-07-24 18:13:01] 2025-07-25 01:13:01,121 [wrapper] apfmon messages muted
[2025-07-24 18:13:01] 2025-07-25 01:13:01,123 [wrapper] ==== wrapper stdout END ====
[2025-07-24 18:13:01] 2025-07-25 01:13:01,125 [wrapper] ==== wrapper stderr END ====
[2025-07-24 18:13:01]  *** Error codes and diagnostics ***
[2025-07-24 18:13:01]     "exeErrorCode": 65,
[2025-07-24 18:13:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 18:13:01]     "pilotErrorCode": 1305,
[2025-07-24 18:13:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 18:13:01]  *** Listing of results directory ***
[2025-07-24 18:13:01] total 342028
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc      5112 Jul 21 14:54 queuedata.json
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc    530466 Jul 21 14:55 pilot3.tar.gz
[2025-07-24 18:13:01] -rwx------. 1 boinc boinc     36292 Jul 21 14:55 runpilot2-wrapper.sh
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc       100 Jul 24 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 18:13:01] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 18:07 run_atlas
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc       105 Jul 24 18:07 job.xml
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc      6596 Jul 24 18:07 init_data.xml
[2025-07-24 18:13:01] -rw-r--r--. 2 boinc boinc 346158439 Jul 24 18:07 EVNT.45697539._000032.pool.root.1
[2025-07-24 18:13:01] -rw-r--r--. 2 boinc boinc     15095 Jul 24 18:07 start_atlas.sh
[2025-07-24 18:13:01] drwxrwx--x. 2 boinc boinc      4096 Jul 24 18:07 shared
[2025-07-24 18:13:01] -rw-r--r--. 2 boinc boinc    542893 Jul 24 18:07 input.tar.gz
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc         0 Jul 24 18:07 boinc_lockfile
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc      2588 Jul 24 18:07 pandaJob.out
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc    979709 Jul 24 18:08 agis_schedconf.cvmfs.json
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc   1593052 Jul 24 18:08 agis_ddmendpoints.agis.ALL.json
[2025-07-24 18:13:01] drwx------. 4 boinc boinc      4096 Jul 24 18:08 pilot3
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc       523 Jul 24 18:10 boinc_task_state.xml
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc       949 Jul 24 18:10 memory_monitor_summary.json
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc     21415 Jul 24 18:10 log.45697541._000793.job.log.tgz.1
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc        95 Jul 24 18:12 pilot_heartbeat.json
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc      8413 Jul 24 18:12 heartbeat.json
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc        22 Jul 24 18:12 wrapper_checkpoint.txt
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc      8192 Jul 24 18:12 boinc_mmap_file
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc       822 Jul 24 18:13 pilotlog.txt
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc     80254 Jul 24 18:13 log.45697541._000793.job.log.1
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc       188 Jul 24 18:13 output.list
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc       620 Jul 24 18:13 runtime_log
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc    122880 Jul 24 18:13 result.tar.gz
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc      8485 Jul 24 18:13 runtime_log.err
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc       643 Jul 24 18:13 nkwLDmjeDy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlwGLDmWnw8en.diag
[2025-07-24 18:13:01] -rw-r--r--. 1 boinc boinc     21815 Jul 24 18:13 stderr.txt
[2025-07-24 18:13:01] No HITS result produced
[2025-07-24 18:13:01]  *** Contents of shared directory: ***
[2025-07-24 18:13:01] total 338716
[2025-07-24 18:13:01] -rw-r--r--. 2 boinc boinc 346158439 Jul 24 18:07 ATLAS.root_0
[2025-07-24 18:13:01] -rw-r--r--. 2 boinc boinc     15095 Jul 24 18:07 start_atlas.sh
[2025-07-24 18:13:01] -rw-r--r--. 2 boinc boinc    542893 Jul 24 18:07 input.tar.gz
[2025-07-24 18:13:01] -rw-------. 1 boinc boinc    122880 Jul 24 18:13 result.tar.gz
18:13:02 (161289): run_atlas exited; CPU time 27.097745
18:13:02 (161289): called boinc_finish(0)

</stderr_txt>
]]>

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