Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:03:40 (1486146): wrapper (7.7.26015): starting
22:03:40 (1486146): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 22:03:40] Arguments: --nthreads 8
[2025-07-24 22:03:40] Threads: 8
[2025-07-24 22:03:40] Checking for CVMFS
[2025-07-24 22:03:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 22:03:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 22:03:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 22:03:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 22:03:41] 2.12.6.0 1904412 14876 380360 148721 1 423 20381771 32503809 21174 16776704 0 87657782 99.506 130170777 18520 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 22:03:41] CVMFS is ok
[2025-07-24 22:03:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 22:03:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 22:03:41] Further information can be found at the LHC@home message board.
[2025-07-24 22:03:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 22:03:41] Checking for apptainer binary...
[2025-07-24 22:03:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 22:03:41] Running /usr/bin/apptainer --version
[2025-07-24 22:03:41] apptainer version 1.4.1-1.el9
[2025-07-24 22:03:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 22:03:41] c7-7-36.aglt2.org
[2025-07-24 22:03:41] apptainer works
[2025-07-24 22:03:41] Set ATHENA_PROC_NUMBER=8
[2025-07-24 22:03:41] Set ATHENA_CORE_NUMBER=8
[2025-07-24 22:03:41] Starting ATLAS job with PandaID=6744930959
[2025-07-24 22:03:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:30:59 (2448642): wrapper (7.7.26015): starting
00:30:59 (2448642): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 00:30:59] Arguments: --nthreads 8
[2025-07-25 00:30:59] Threads: 8
[2025-07-25 00:30:59] This job has been restarted, cleaning up previous attempt
[2025-07-25 00:30:59] Checking for CVMFS
[2025-07-25 00:30:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 00:30:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 00:30:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 00:31:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 00:31:00] 2.12.6.0 1904412 15023 363716 148727 3 327 21835131 32503808 21208 16776704 0 88278380 99.507 130664124 18516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-25 00:31:00] CVMFS is ok
[2025-07-25 00:31:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 00:31:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 00:31:00] Further information can be found at the LHC@home message board.
[2025-07-25 00:31:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 00:31:00] Checking for apptainer binary...
[2025-07-25 00:31:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 00:31:00] Running /usr/bin/apptainer --version
[2025-07-25 00:31:00] apptainer version 1.4.1-1.el9
[2025-07-25 00:31:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 00:31:00] c7-7-36.aglt2.org
[2025-07-25 00:31:00] apptainer works
[2025-07-25 00:31:00] Set ATHENA_PROC_NUMBER=8
[2025-07-25 00:31:00] Set ATHENA_CORE_NUMBER=8
[2025-07-25 00:31:00] Starting ATLAS job with PandaID=6744930959
[2025-07-25 00:31:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 02:56:22]  *** The last 200 lines of the pilot log: ***
[2025-07-25 02:56:22] 2025-07-25 06:55:49,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 02:56:22] 2025-07-25 06:55:49,080 | INFO     | fitting pss+swap vs Time
[2025-07-25 02:56:22] 2025-07-25 06:55:49,081 | INFO     | sum of square deviations: 887798984.1197218
[2025-07-25 02:56:22] 2025-07-25 06:55:49,081 | INFO     | sum of deviations: 12283986258.07745
[2025-07-25 02:56:22] 2025-07-25 06:55:49,082 | INFO     | mean x: 1753422215.5985916
[2025-07-25 02:56:22] 2025-07-25 06:55:49,082 | INFO     | mean y: 2112768.3873239434
[2025-07-25 02:56:22] 2025-07-25 06:55:49,082 | INFO     | -- intersect: -24259026055.0338
[2025-07-25 02:56:22] 2025-07-25 06:55:49,082 | INFO     | intersect: -24259026055.0338
[2025-07-25 02:56:22] 2025-07-25 06:55:49,082 | INFO     | chi2: 2.498022193783713
[2025-07-25 02:56:22] 2025-07-25 06:55:49,082 | INFO     | sum of square deviations: 797280626.5693413
[2025-07-25 02:56:22] 2025-07-25 06:55:49,083 | INFO     | sum of deviations: 19031247299.96351
[2025-07-25 02:56:22] 2025-07-25 06:55:49,083 | INFO     | mean x: 1753422063.1021898
[2025-07-25 02:56:22] 2025-07-25 06:55:49,083 | INFO     | mean y: 2123777.7883211677
[2025-07-25 02:56:22] 2025-07-25 06:55:49,083 | INFO     | -- intersect: -41852409986.187126
[2025-07-25 02:56:22] 2025-07-25 06:55:49,083 | INFO     | intersect: -41852409986.187126
[2025-07-25 02:56:22] 2025-07-25 06:55:49,083 | INFO     | chi2: 1.8387891226977429
[2025-07-25 02:56:22] 2025-07-25 06:55:49,084 | INFO     | current chi2=1.8387891226977429 (change=26.390200724655717 %)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,084 | INFO     | sum of square deviations: 713134481.5151511
[2025-07-25 02:56:22] 2025-07-25 06:55:49,084 | INFO     | sum of deviations: 18433452285.484833
[2025-07-25 02:56:22] 2025-07-25 06:55:49,084 | INFO     | mean x: 1753421910.6060605
[2025-07-25 02:56:22] 2025-07-25 06:55:49,085 | INFO     | mean y: 2122667.893939394
[2025-07-25 02:56:22] 2025-07-25 06:55:49,085 | INFO     | -- intersect: -45321192868.340965
[2025-07-25 02:56:22] 2025-07-25 06:55:49,085 | INFO     | intersect: -45321192868.340965
[2025-07-25 02:56:22] 2025-07-25 06:55:49,085 | INFO     | chi2: 1.8390879805727598
[2025-07-25 02:56:22] 2025-07-25 06:55:49,085 | INFO     | current chi2=1.8390879805727598 (change=-0.016252971660962956 %)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,085 | INFO     | right removable region: 131
[2025-07-25 02:56:22] 2025-07-25 06:55:49,085 | INFO     | sum of square deviations: 797272086.5693413
[2025-07-25 02:56:22] 2025-07-25 06:55:49,086 | INFO     | sum of deviations: -10657101624.642338
[2025-07-25 02:56:22] 2025-07-25 06:55:49,086 | INFO     | mean x: 1753422368.1021898
[2025-07-25 02:56:22] 2025-07-25 06:55:49,086 | INFO     | mean y: 2151008.4744525547
[2025-07-25 02:56:22] 2025-07-25 06:55:49,086 | INFO     | -- intersect: 23440072243.36124
[2025-07-25 02:56:22] 2025-07-25 06:55:49,086 | INFO     | intersect: 23440072243.36124
[2025-07-25 02:56:22] 2025-07-25 06:55:49,086 | INFO     | chi2: 0.7684464763484472
[2025-07-25 02:56:22] 2025-07-25 06:55:49,087 | INFO     | current chi2=0.7684464763484472 (change=69.23780428129447 %)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,087 | INFO     | sum of square deviations: 713125513.7196949
[2025-07-25 02:56:22] 2025-07-25 06:55:49,087 | INFO     | sum of deviations: -12547634018.590908
[2025-07-25 02:56:22] 2025-07-25 06:55:49,087 | INFO     | mean x: 1753422520.5984848
[2025-07-25 02:56:22] 2025-07-25 06:55:49,088 | INFO     | mean y: 2154357.0454545454
[2025-07-25 02:56:22] 2025-07-25 06:55:49,088 | INFO     | -- intersect: 30854092262.99019
[2025-07-25 02:56:22] 2025-07-25 06:55:49,088 | INFO     | intersect: 30854092262.99019
[2025-07-25 02:56:22] 2025-07-25 06:55:49,088 | INFO     | chi2: 0.7341209825678516
[2025-07-25 02:56:22] 2025-07-25 06:55:49,088 | INFO     | current chi2=0.7341209825678516 (change=4.466868524624595 %)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,088 | INFO     | left removable region: 20
[2025-07-25 02:56:22] 2025-07-25 06:55:49,088 | INFO     | sum of square deviations: 424030653.47747797
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | sum of deviations: -4121813035.288287
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | mean x: 1753422490.1171172
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | mean y: 2165699.099099099
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | -- intersect: 17046404404.158314
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | intersect: 17046404404.158314
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | chi2: 0.04373444243467357
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | -- intersect: 17046404404.158314
[2025-07-25 02:56:22] 2025-07-25 06:55:49,089 | INFO     | current memory leak: -9.72 B/s (using 111 data points, chi2=0.04)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,090 | INFO     | could have reported an average CPU frequency of 2934 MHz (8 samples)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,090 | INFO     | ..............................
[2025-07-25 02:56:22] 2025-07-25 06:55:49,090 | INFO     | . Timing measurements:
[2025-07-25 02:56:22] 2025-07-25 06:55:49,090 | INFO     | . get job = 0 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,090 | INFO     | . initial setup = 1 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,090 | INFO     | . payload setup = 12 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,090 | INFO     | . stage-in = 0 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,091 | INFO     | . payload execution = 8630 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,091 | INFO     | . stage-out = 2 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,091 | INFO     | . log creation = 0 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,091 | INFO     | ..............................
[2025-07-25 02:56:22] 2025-07-25 06:55:49,154 | INFO     | 
[2025-07-25 02:56:22] 2025-07-25 06:55:49,154 | INFO     | job summary report
[2025-07-25 02:56:22] 2025-07-25 06:55:49,154 | INFO     | --------------------------------------------------
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | PanDA job id: 6744930959
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | task id: 45743349
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | errors: (none)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | pilot state: finished 
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | transexitcode: 0
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | exeerrorcode: 0
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | exeerrordiag: 
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | exitcode: 0
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | exitmsg: OK
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | cpuconsumptiontime: 39017 s
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | nevents: 400
[2025-07-25 02:56:22] 2025-07-25 06:55:49,155 | INFO     | neventsw: 0
[2025-07-25 02:56:22] 2025-07-25 06:55:49,156 | INFO     | pid: 2479258
[2025-07-25 02:56:22] 2025-07-25 06:55:49,156 | INFO     | pgrp: 2479258
[2025-07-25 02:56:22] 2025-07-25 06:55:49,156 | INFO     | corecount: 8
[2025-07-25 02:56:22] 2025-07-25 06:55:49,156 | INFO     | event service: False
[2025-07-25 02:56:22] 2025-07-25 06:55:49,156 | INFO     | sizes: {0: 2397292, 1: 2397491, 7: 2397753, 12: 2397781, 8646: 2425687, 8649: 2434713, 8651: 2434897, 8656: 2435091}
[2025-07-25 02:56:22] 2025-07-25 06:55:49,156 | INFO     | --------------------------------------------------
[2025-07-25 02:56:22] 2025-07-25 06:55:49,156 | INFO     | 
[2025-07-25 02:56:22] 2025-07-25 06:55:49,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-25 02:56:22] 2025-07-25 06:55:49,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 02:56:22] 2025-07-25 06:55:49,199 | INFO     | job 6744930959 has completed (purged errors)
[2025-07-25 02:56:22] 2025-07-25 06:55:49,199 | INFO     | overall cleanup function is called
[2025-07-25 02:56:22] 2025-07-25 06:55:49,831 | INFO     | PID=2459273 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-25 02:56:22] 2025-07-25 06:55:49,831 | INFO     | .. there are 28 such processes running
[2025-07-25 02:56:22] 2025-07-25 06:55:50,204 | INFO     | --- collectZombieJob: --- 10, [2479258]
[2025-07-25 02:56:22] 2025-07-25 06:55:50,205 | INFO     | zombie collector waiting for pid 2479258
[2025-07-25 02:56:22] 2025-07-25 06:55:50,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 02:56:22] 2025-07-25 06:55:50,205 | INFO     | collected zombie processes
[2025-07-25 02:56:22] 2025-07-25 06:55:50,205 | INFO     | will attempt to kill all subprocesses of pid=2479258
[2025-07-25 02:56:22] 2025-07-25 06:55:50,666 | INFO     | process IDs to be killed: [2479258] (in reverse order)
[2025-07-25 02:56:22] 2025-07-25 06:55:50,799 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 02:56:22] 2025-07-25 06:55:50,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 02:56:22] 2025-07-25 06:55:50,819 | INFO     | did not find any defunct processes belonging to 2479258
[2025-07-25 02:56:22] 2025-07-25 06:55:50,838 | INFO     | did not find any defunct processes belonging to 2479258
[2025-07-25 02:56:22] 2025-07-25 06:55:50,839 | INFO     | ready for new job
[2025-07-25 02:56:22] 2025-07-25 06:55:50,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 02:56:22] 2025-07-25 06:55:50,841 | INFO     | ***************************************
[2025-07-25 02:56:22] 2025-07-25 06:55:50,841 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 02:56:22] 2025-07-25 06:55:50,841 | INFO     | ***************************************
[2025-07-25 02:56:22] 2025-07-25 06:55:50,841 | INFO     | 
[2025-07-25 02:56:22] 2025-07-25 06:55:50,860 | INFO     | architecture information:
[2025-07-25 02:56:22] 2025-07-25 06:55:50,860 | INFO     | executing command: cat /etc/os-release
[2025-07-25 02:56:22] 2025-07-25 06:55:50,877 | INFO     | cat /etc/os-release:
[2025-07-25 02:56:22] NAME="CentOS Linux"
[2025-07-25 02:56:22] VERSION="7 (Core)"
[2025-07-25 02:56:22] ID="centos"
[2025-07-25 02:56:22] ID_LIKE="rhel fedora"
[2025-07-25 02:56:22] VERSION_ID="7"
[2025-07-25 02:56:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 02:56:22] ANSI_COLOR="0;31"
[2025-07-25 02:56:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 02:56:22] HOME_URL="https://www.centos.org/"
[2025-07-25 02:56:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 02:56:22] 
[2025-07-25 02:56:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 02:56:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 02:56:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 02:56:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 02:56:22] 
[2025-07-25 02:56:22] 2025-07-25 06:55:50,877 | INFO     | ***************************************
[2025-07-25 02:56:22] 2025-07-25 06:55:51,379 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-25 02:56:22] 2025-07-25 06:55:51,400 | INFO     | sufficient remaining disk space (95200215040 B)
[2025-07-25 02:56:22] 2025-07-25 06:55:51,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 02:56:22] 2025-07-25 06:55:51,401 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 02:56:22] 2025-07-25 06:55:51,401 | INFO     | update_server=False
[2025-07-25 02:56:22] 2025-07-25 06:55:51,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 02:56:22] 2025-07-25 06:55:51,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 02:56:22] 2025-07-25 06:55:51,446 | INFO     | aborting loop
[2025-07-25 02:56:22] 2025-07-25 06:55:52,292 | INFO     | all payload control threads have been joined
[2025-07-25 02:56:22] 2025-07-25 06:55:52,365 | INFO     | all data control threads have been joined
[2025-07-25 02:56:22] 2025-07-25 06:55:52,406 | INFO     | [job] retrieve thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:52,451 | INFO     | [job] job monitor thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:52,658 | INFO     | all job control threads have been joined
[2025-07-25 02:56:22] 2025-07-25 06:55:52,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 02:56:22] 2025-07-25 06:55:52,809 | INFO     | [payload] validate_post thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:52,816 | INFO     | [payload] failed_post thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:52,958 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:53,297 | INFO     | [payload] control thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:53,369 | INFO     | [data] control thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:53,400 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:53,424 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:53,476 | INFO     | [data] copytool_in thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:53,544 | INFO     | [job] validate thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:53,663 | INFO     | [job] control thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:54,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 02:56:22] 2025-07-25 06:55:54,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 02:56:22] 2025-07-25 06:55:54,789 | INFO     | [data] copytool_out thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:55,167 | INFO     | [job] queue monitor thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:55:58,530 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:56:01,700 | INFO     | job.realtimelogging is not enabled
[2025-07-25 02:56:22] 2025-07-25 06:56:02,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 02:56:22] 2025-07-25 06:56:02,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544638523200)>', '<ExcThread(monitor, started 140544361596672)>']
[2025-07-25 02:56:22] 2025-07-25 06:56:07,921 | INFO     | all workflow threads have been joined
[2025-07-25 02:56:22] 2025-07-25 06:56:07,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 02:56:22] 2025-07-25 06:56:07,923 | INFO     | traces error code: 0
[2025-07-25 02:56:22] 2025-07-25 06:56:07,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 02:56:22] 2025-07-25 06:56:22,441 | INFO     | PID=2459273 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 02:56:22] 2025-07-25 06:56:22,442 | INFO     | .. there are 28 such processes running
[2025-07-25 02:56:22] 2025-07-25 06:56:22,445 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 02:56:22] 2025-07-25 06:56:22,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 02:56:22] 2025-07-25 06:56:22,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 02:56:22] 2025-07-25 06:56:22,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 02:56:22] 2025-07-25 06:56:22,446 | INFO     | [monitor] control thread has ended
[2025-07-25 02:56:22] 2025-07-25 06:56:22,610 [wrapper] ==== pilot stdout END ====
[2025-07-25 02:56:22] 2025-07-25 06:56:22,613 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 02:56:22] 2025-07-25 06:56:22,615 [wrapper] pilotpid: 2459273
[2025-07-25 02:56:22] 2025-07-25 06:56:22,618 [wrapper] Pilot exit status: 0
[2025-07-25 02:56:22] 2025-07-25 06:56:22,630 [wrapper] pandaids: 6744930959 6744930959
[2025-07-25 02:56:22] 2025-07-25 06:56:22,740 [wrapper] cleanup supervisor_pilot 3188671 2459274
[2025-07-25 02:56:22] 2025-07-25 06:56:22,744 [wrapper] Test setup, not cleaning
[2025-07-25 02:56:22] 2025-07-25 06:56:22,747 [wrapper] apfmon messages muted
[2025-07-25 02:56:22] 2025-07-25 06:56:22,751 [wrapper] ==== wrapper stdout END ====
[2025-07-25 02:56:22] 2025-07-25 06:56:22,754 [wrapper] ==== wrapper stderr END ====
[2025-07-25 02:56:22]  *** Error codes and diagnostics ***
[2025-07-25 02:56:22]     "exeErrorCode": 0,
[2025-07-25 02:56:22]     "exeErrorDiag": "",
[2025-07-25 02:56:22]     "pilotErrorCode": 0,
[2025-07-25 02:56:22]     "pilotErrorDiag": "",
[2025-07-25 02:56:22]  *** Listing of results directory ***
[2025-07-25 02:56:22] total 503236
[2025-07-25 02:56:22] drwx------. 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 16:51 pilot3.tar.gz
[2025-07-25 02:56:22] -rwx------. 1 boincer umatlas     36292 Jul 24 16:52 runpilot2-wrapper.sh
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 16:52 queuedata.json
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas       100 Jul 24 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 02:56:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 22:03 run_atlas
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas       105 Jul 24 22:03 job.xml
[2025-07-25 02:56:22] -rw-r--r--. 3 boincer umatlas 147644273 Jul 24 22:03 EVNT.45743347._000528.pool.root.1
[2025-07-25 02:56:22] -rw-r--r--. 3 boincer umatlas 147644273 Jul 24 22:03 ATLAS.root_0
[2025-07-25 02:56:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 22:03 start_atlas.sh
[2025-07-25 02:56:22] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 22:03 shared
[2025-07-25 02:56:22] -rw-r--r--. 2 boincer umatlas    542877 Jul 24 22:03 input.tar.gz
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas         0 Jul 24 22:03 boinc_lockfile
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas      2557 Jul 25 00:31 pandaJob.out
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas    979701 Jul 25 00:31 agis_schedconf.cvmfs.json
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas      6935 Jul 25 02:45 init_data.xml
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas 213987511 Jul 25 02:55 HITS.45743349._009695.pool.root.1
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas       531 Jul 25 02:55 boinc_task_state.xml
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas      1045 Jul 25 02:55 memory_monitor_summary.json
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas   1593052 Jul 25 02:55 agis_ddmendpoints.agis.ALL.json
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas    324978 Jul 25 02:55 log.45743349._009695.job.log.tgz.1
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas      7789 Jul 25 02:55 heartbeat.json
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas        28 Jul 25 02:56 wrapper_checkpoint.txt
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas      8192 Jul 25 02:56 boinc_mmap_file
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas        96 Jul 25 02:56 pilot_heartbeat.json
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas       823 Jul 25 02:56 pilotlog.txt
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas    751325 Jul 25 02:56 log.45743349._009695.job.log.1
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas       357 Jul 25 02:56 output.list
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas       620 Jul 25 02:56 runtime_log
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas   1095680 Jul 25 02:56 result.tar.gz
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas      8740 Jul 25 02:56 runtime_log.err
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas       780 Jul 25 02:56 M4AODm46Hz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmshNLDm5imq9m.diag
[2025-07-25 02:56:22] -rw-r--r--. 1 boincer umatlas     23274 Jul 25 02:56 stderr.txt
[2025-07-25 02:56:22] HITS file was successfully produced:
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas 213987511 Jul 25 02:55 shared/HITS.pool.root.1
[2025-07-25 02:56:22]  *** Contents of shared directory: ***
[2025-07-25 02:56:22] total 354788
[2025-07-25 02:56:22] -rw-r--r--. 3 boincer umatlas 147644273 Jul 24 22:03 ATLAS.root_0
[2025-07-25 02:56:22] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 22:03 start_atlas.sh
[2025-07-25 02:56:22] -rw-r--r--. 2 boincer umatlas    542877 Jul 24 22:03 input.tar.gz
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas 213987511 Jul 25 02:55 HITS.pool.root.1
[2025-07-25 02:56:22] -rw-------. 1 boincer umatlas   1095680 Jul 25 02:56 result.tar.gz
02:56:24 (2448642): run_atlas exited; CPU time 39314.923702
02:56:24 (2448642): called boinc_finish(0)

</stderr_txt>
]]>

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