Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-24 21:06:25 (23056): Detected: vboxwrapper 26206
2025-07-24 21:06:25 (23056): Detected: BOINC client v8.2.4
2025-07-24 21:06:26 (23056): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-07-24 21:06:26 (23056): Successfully copied 'init_data.xml' to the shared directory.
2025-07-24 21:06:27 (23056): Create VM. (boinc_b047c01e513ba5f2, slot#5)
2025-07-24 21:06:27 (23056): Setting Memory Size for VM. (4400MB)
2025-07-24 21:06:28 (23056): Setting CPU Count for VM. (4)
2025-07-24 21:06:28 (23056): Setting Chipset Options for VM.
2025-07-24 21:06:28 (23056): Setting Graphics Controller Options for VM.
2025-07-24 21:06:28 (23056): Setting Boot Options for VM.
2025-07-24 21:06:29 (23056): Setting Network Configuration for NAT.
2025-07-24 21:06:29 (23056): Enabling VM Network Access.
2025-07-24 21:06:29 (23056): Disabling USB Support for VM.
2025-07-24 21:06:29 (23056): Disabling COM Port Support for VM.
2025-07-24 21:06:30 (23056): Disabling LPT Port Support for VM.
2025-07-24 21:06:30 (23056): Disabling Audio Support for VM.
2025-07-24 21:06:30 (23056): Disabling Clipboard Support for VM.
2025-07-24 21:06:31 (23056): Disabling Drag and Drop Support for VM.
2025-07-24 21:06:31 (23056): Adding storage controller(s) to VM.
2025-07-24 21:06:31 (23056): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-24 21:06:34 (23056): Adding VirtualBox Guest Additions to VM.
2025-07-24 21:06:34 (23056): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-24 21:06:35 (23056): forwarding host port 59983 to guest port 80
2025-07-24 21:06:35 (23056): Enabling remote desktop for VM.
2025-07-24 21:06:35 (23056): Required extension pack not installed, remote desktop not enabled.
2025-07-24 21:06:35 (23056): Enabling shared directory for VM.
2025-07-24 21:06:36 (23056): Starting VM using VBoxManage interface. (boinc_b047c01e513ba5f2, slot#5)
2025-07-24 21:06:41 (23056): Successfully started VM. (PID = '22568')
2025-07-24 21:06:41 (23056): Reporting VM Process ID to BOINC.
2025-07-24 21:06:41 (23056): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-24 21:06:41 (23056): Guest Log: CPUID EDX: 0x178bfbff
2025-07-24 21:06:41 (23056): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-24 21:06:41 (23056): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-24 21:06:41 (23056): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-24 21:06:41 (23056): Detected: Web Application Enabled (http://localhost:59983)
2025-07-24 21:06:42 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 21:06:51 (23056): Preference change detected
2025-07-24 21:06:51 (23056): Setting CPU throttle for VM. (90%)
2025-07-24 21:06:51 (23056): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-24 21:06:51 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 21:06:52 (23056): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-24 21:06:52 (23056): Guest Log: BIOS: Booting from Hard Disk...
2025-07-24 21:06:55 (23056): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-24 21:06:55 (23056): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-24 21:06:55 (23056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-24 21:07:00 (23056): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-24 21:07:00 (23056): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-24 21:07:04 (23056): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000064 main     Log opened 2025-07-24T21:06:53.253291000Z
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000125 main     OS Product: Linux
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000148 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000167 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000186 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000187 main     Process ID: 1308
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000187 main     Package type: LINUX_64BITS_GENERIC
2025-07-24 21:07:04 (23056): Guest Log: 00:00:00.000973 main     5.2.32 r132073 started. Verbose level = 0
2025-07-24 21:07:04 (23056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-24 21:07:04 (23056): Guest Log: [INFO] Mounting shared directory
2025-07-24 21:07:04 (23056): Guest Log: [INFO] Checking for init_data.xml
2025-07-24 21:07:08 (23056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-24 21:07:08 (23056): Guest Log: [INFO] Detected branch: prod
2025-07-24 21:07:08 (23056): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-24 21:07:08 (23056): Guest Log: Copying input files
2025-07-24 21:07:09 (23056): Guest Log: Copied input files into RunAtlas.
2025-07-24 21:07:09 (23056): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-24 21:07:09 (23056): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-24 21:07:09 (23056): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-24 21:07:09 (23056): Guest Log: Further information can be found at the LHC@home message board.
2025-07-24 21:07:14 (23056): Guest Log: 00:00:10.016010 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 421 274 416 000ns (GuestNow=1 753 405 634 529 651 000 ns GuestLast=1 753 391 213 255 235 000 ns fSetTimeLastLoop=true )
2025-07-24 21:07:18 (23056): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-24 21:07:18 (23056): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-24 21:07:18 (23056): Guest Log: 2.6.3.0 1586 0 32196 148720 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-24 21:07:19 (23056): Guest Log: copied the webapp to /var/www
2025-07-24 21:07:19 (23056): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-24 21:07:19 (23056): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-24 21:07:20 (23056): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-24 21:07:20 (23056): Guest Log:  *** Starting ATLAS job. (PandaID=6744931596 taskID=45743349) ***
2025-07-24 21:19:32 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 21:19:52 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 22:19:48 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 22:20:08 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 22:34:29 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 22:34:49 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 22:47:58 (23056): Status Report: Elapsed Time: '6000.000000'
2025-07-24 22:47:58 (23056): Status Report: CPU Time: '16701.609375'
2025-07-24 22:48:30 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 22:48:50 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 22:52:31 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 22:52:51 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 23:10:43 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 23:11:03 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 23:14:13 (23056): VM state change detected. (old = 'running', new = 'paused')
2025-07-24 23:14:33 (23056): VM state change detected. (old = 'paused', new = 'running')
2025-07-24 23:15:40 (23056): Guest Log:  *** Job finished ***
2025-07-24 23:15:40 (23056): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:09,296 | INFO     | all workflow threads have been joined
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:09,297 | INFO     | end of generic workflow (traces error code: 0)
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:09,297 | INFO     | traces error code: 0
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:09,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,499 | INFO     | PID=5937 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,500 | INFO     | found 0 job(s) in 20 queues
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,500 | INFO     | [monitor] control thread has ended
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,552 [wrapper] ==== pilot stdout END ====
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,555 [wrapper] ==== wrapper stdout RESUME ====
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,557 [wrapper] pilotpid: 5937
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,559 [wrapper] Pilot exit status: 0
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,675 [wrapper] pandaids: 6744931596
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,693 [wrapper] cleanup supervisor_pilot  5078 5938
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,697 [wrapper] Test setup, not cleaning
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,700 [wrapper] apfmon messages muted
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,702 [wrapper] ==== wrapper stdout END ====
2025-07-24 23:15:40 (23056): Guest Log: 2025-07-25 03:13:22,705 [wrapper] ==== wrapper stderr END ====
2025-07-24 23:15:40 (23056): Guest Log:  *** Error codes and diagnostics ***
2025-07-24 23:15:40 (23056): Guest Log:     "exeErrorCode": 0,
2025-07-24 23:15:40 (23056): Guest Log:     "exeErrorDiag": "",
2025-07-24 23:15:40 (23056): Guest Log:     "pilotErrorCode": 0,
2025-07-24 23:15:40 (23056): Guest Log:     "pilotErrorDiag": "",
2025-07-24 23:15:40 (23056): Guest Log:  *** Listing of results directory ***
2025-07-24 23:15:40 (23056): Guest Log: total 212604
2025-07-24 23:15:40 (23056): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 24 20:51 pilot3.tar.gz
2025-07-24 23:15:40 (23056): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 24 20:55 queuedata.json
2025-07-24 23:15:40 (23056): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 24 20:57 runpilot2-wrapper.sh
2025-07-24 23:15:40 (23056): Guest Log: -rwxr-xr-x. 1 atlas atlas     11782 Jul 25 01:07 init_data.xml
2025-07-24 23:15:40 (23056): Guest Log: -rwxr-xr-x. 1 atlas atlas    542875 Jul 25 01:07 input.tar.gz
2025-07-24 23:15:40 (23056): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 25 01:07 start_atlas.sh
2025-07-24 23:15:40 (23056): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 25 01:07 EVNT.45743347._000535.pool.root.1 -> /data/./ATLAS.root_0
2025-07-24 23:15:40 (23056): Guest Log: -rw-r--r--. 1 atlas atlas      2559 Jul 25 01:07 pandaJob.out
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas    979709 Jul 25 01:12 agis_schedconf.cvmfs.json
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 25 01:12 agis_ddmendpoints.agis.ALL.json
2025-07-24 23:15:40 (23056): Guest Log: drwx------. 4 atlas atlas      4096 Jul 25 01:13 pilot3
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas 212180715 Jul 25 03:12 HITS.45743349._009802.pool.root.1
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas      1029 Jul 25 03:12 memory_monitor_summary.json
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas    245048 Jul 25 03:12 log.45743349._009802.job.log.tgz.1
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas        95 Jul 25 03:12 pilot_heartbeat.json
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas      7774 Jul 25 03:12 heartbeat.json
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas       744 Jul 25 03:13 pilotlog.txt
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas    615301 Jul 25 03:13 log.45743349._009802.job.log.1
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas       357 Jul 25 03:13 output.list
2025-07-24 23:15:40 (23056): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 25 03:13 runtime_log
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas    880640 Jul 25 03:13 result.tar.gz
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas       656 Jul 25 03:13 RvnLDmyBIz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJjNLDmc7SX3m.diag
2025-07-24 23:15:40 (23056): Guest Log: -rw-r--r--. 1 atlas atlas      8592 Jul 25 03:13 runtime_log.err
2025-07-24 23:15:40 (23056): Guest Log: Looking for outputfile HITS.45743349._009802.pool.root.1
2025-07-24 23:15:40 (23056): Guest Log: HITS file was successfully produced
2025-07-24 23:15:40 (23056): Guest Log: -rw-------. 1 atlas atlas 212180715 Jul 25 03:12 /home/atlas/RunAtlas/HITS.45743349._009802.pool.root.1
2025-07-24 23:15:40 (23056): Guest Log: Successfully finished the ATLAS job!
2025-07-24 23:15:40 (23056): Guest Log: Copying the results back to the shared directory!
2025-07-24 23:15:40 (23056): Guest Log:  *** Contents of shared directory: ***
2025-07-24 23:15:41 (23056): Guest Log: total 351944
2025-07-24 23:15:41 (23056): Guest Log: -rwxrwxrwx. 1 root root 146753682 Jul 25 01:06 ATLAS.root_0
2025-07-24 23:15:41 (23056): Guest Log: -rwxrwxrwx. 1 root root 212180715 Jul 25  2025 HITS.pool.root.1
2025-07-24 23:15:41 (23056): Guest Log: -rwxrwxrwx. 1 root root     11782 Jul 25 01:06 init_data.xml
2025-07-24 23:15:41 (23056): Guest Log: -rwxrwxrwx. 1 root root    542875 Jul 25 01:06 input.tar.gz
2025-07-24 23:15:41 (23056): Guest Log: -rwxrwxrwx. 1 root root    880640 Jul 25  2025 result.tar.gz
2025-07-24 23:15:41 (23056): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 25 01:06 start_atlas.sh
2025-07-24 23:15:41 (23056): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-24 23:15:41 (23056): VM Completion File Detected.
2025-07-24 23:15:41 (23056): Powering off VM.
2025-07-24 23:15:41 (23056): Successfully stopped VM.
2025-07-24 23:15:41 (23056): Deregistering VM. (boinc_b047c01e513ba5f2, slot#5)
2025-07-24 23:15:41 (23056): Removing network bandwidth throttle group from VM.
2025-07-24 23:15:42 (23056): Removing VM from VirtualBox.
23:15:47 (23056): called boinc_finish(0)

</stderr_txt>
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