Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:02:29 (592715): wrapper (7.7.26015): starting
21:02:29 (592715): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 21:02:29] Arguments: --nthreads 8
[2025-07-24 21:02:29] Threads: 8
[2025-07-24 21:02:29] Checking for CVMFS
[2025-07-24 21:02:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 21:02:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 21:02:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 21:02:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 21:02:29] 2.13.1.0 3153527 4806 95528 148720 3 188 21236940 40960000 12867 16776704 0 55881824 99.998 177344 57597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 21:02:29] CVMFS is ok
[2025-07-24 21:02:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 21:02:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 21:02:29] Further information can be found at the LHC@home message board.
[2025-07-24 21:02:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 21:02:29] Checking for apptainer binary...
[2025-07-24 21:02:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 21:02:29] Running /usr/bin/apptainer --version
[2025-07-24 21:02:29] apptainer version 1.4.1-1.el9
[2025-07-24 21:02:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 21:02:29] c-208-37.aglt2.org
[2025-07-24 21:02:29] apptainer works
[2025-07-24 21:02:29] Set ATHENA_PROC_NUMBER=8
[2025-07-24 21:02:29] Set ATHENA_CORE_NUMBER=8
[2025-07-24 21:02:29] Starting ATLAS job with PandaID=6741798918
[2025-07-24 21:02:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 22:15:35]  *** The last 200 lines of the pilot log: ***
[2025-07-24 22:15:35] ]
[2025-07-24 22:15:35] 2025-07-25 02:14:54,766 | INFO     | transferring file log.45697532._001764.job.log.tgz.1 from /tmp/boinchome/slots/15/PanDA_Pilot-6741798918/log.45697532._001764.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-24 22:15:35] 2025-07-25 02:14:54,766 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/15/PanDA_Pilot-6741798918/log.45697532._001764.job.log.tgz.1 /tmp/boinchome/slots/15/log.45697532._001764.j
[2025-07-24 22:15:35] 2025-07-25 02:14:54,784 | INFO     | adding to output.list: log.45697532._001764.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/74/log.45697532._001764.job.log.tg
[2025-07-24 22:15:35] 2025-07-25 02:14:54,784 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 22:15:35] 2025-07-25 02:14:54,784 | INFO     | summary of transferred files:
[2025-07-24 22:15:35] 2025-07-25 02:14:54,784 | INFO     |  -- lfn=log.45697532._001764.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 22:15:35] 2025-07-25 02:14:54,785 | INFO     | stage-out finished correctly
[2025-07-24 22:15:35] 2025-07-25 02:14:57,226 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 22:15:35] 2025-07-25 02:14:58,330 | WARNING  | process 602730 can no longer be monitored (due to stat problems) - aborting
[2025-07-24 22:15:35] 2025-07-25 02:14:58,331 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6741798918/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,331 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6741798918/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,332 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3338555 B
[2025-07-24 22:15:35] 2025-07-25 02:14:58,332 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16012 B
[2025-07-24 22:15:35] 2025-07-25 02:14:58,332 | INFO     | executing command: df -mP /tmp/boinchome/slots/15
[2025-07-24 22:15:35] 2025-07-25 02:14:58,346 | INFO     | sufficient remaining disk space (165997969408 B)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,346 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,347 | INFO     | size of work directory /tmp/boinchome/slots/15/PanDA_Pilot-6741798918: 3635202 B (within 2537553920 B limit)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,347 | INFO     | pfn file=/tmp/boinchome/slots/15/PanDA_Pilot-6741798918/HITS.45697532._001764.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,347 | INFO     | total size of present files: 0 B (workdir size: 3635202 B)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,347 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/15/PanDA_Pilot-6741798918/HITS.45697532._001764.pool.root.1 since it does not exist
[2025-07-24 22:15:35] 2025-07-25 02:14:58,674 | INFO     | number of running child processes to parent process 602730: 1
[2025-07-24 22:15:35] 2025-07-25 02:14:58,674 | INFO     | maximum number of monitored processes: 6
[2025-07-24 22:15:35] 2025-07-25 02:14:58,759 | INFO     | job 6741798918 has state=finished
[2025-07-24 22:15:35] 2025-07-25 02:14:58,759 | INFO     | preparing for final server update for job 6741798918 in state='finished'
[2025-07-24 22:15:35] 2025-07-25 02:14:58,760 | INFO     | this job has now completed (state=finished)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,760 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,760 | INFO     | log transfer has been attempted: DONE
[2025-07-24 22:15:35] 2025-07-25 02:14:58,760 | INFO     | job 6741798918 has finished - writing final server update
[2025-07-24 22:15:35] 2025-07-25 02:14:58,760 | INFO     | total number of processed events: 400 (read)
[2025-07-24 22:15:35] 2025-07-25 02:14:58,761 | INFO     | executing command: lscpu
[2025-07-24 22:15:35] 2025-07-25 02:14:58,817 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 22:15:35] 2025-07-25 02:15:01,178 | INFO     | monitor loop #320: job 0:6741798918 is in state 'finished'
[2025-07-24 22:15:35] 2025-07-25 02:15:01,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 22:15:35] 2025-07-25 02:15:02,272 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-24 22:15:35] 2025-07-25 02:15:02,277 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3752.80534375
[2025-07-24 22:15:35] 2025-07-25 02:15:02,290 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6741798918/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 22:15:35] 2025-07-25 02:15:02,291 | INFO     | extracted standard info from prmon json
[2025-07-24 22:15:35] 2025-07-25 02:15:02,291 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 22:15:35] 2025-07-25 02:15:02,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 22:15:35] 2025-07-25 02:15:02,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 22:15:35] 2025-07-25 02:15:02,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 22:15:35] 2025-07-25 02:15:02,292 | INFO     | fitting pss+swap vs Time
[2025-07-24 22:15:35] 2025-07-25 02:15:02,292 | INFO     | sum of square deviations: 81266640.0
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | sum of deviations: 623855357.0
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | mean x: 1753407609.5
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | mean y: 2570096.15625
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | -- intersect: -13457722222.944664
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | intersect: -13457722222.944664
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | chi2: 0.0002825815694431192
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | -- intersect: -13457722222.944664
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | current memory leak: 7.68 B/s (using 64 data points, chi2=0.00)
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | could have reported an average CPU frequency of 3767 MHz (6 samples)
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | ..............................
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | . Timing measurements:
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | . get job = 0 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | . initial setup = 2 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | . payload setup = 5 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | . stage-in = 0 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | . payload execution = 4311 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,293 | INFO     | . stage-out = 0 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,294 | INFO     | . log creation = 0 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,294 | INFO     | ..............................
[2025-07-24 22:15:35] 2025-07-25 02:15:02,350 | INFO     | 
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | job summary report
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | --------------------------------------------------
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | PanDA job id: 6741798918
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | task id: 45697532
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | errors: (none)
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | pilot state: finished 
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | transexitcode: 0
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | exeerrorcode: 0
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | exeerrordiag: 
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | exitcode: 0
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | exitmsg: OK
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | cpuconsumptiontime: 32587 s
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | nevents: 400
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | neventsw: 0
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | pid: 602730
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | pgrp: 602730
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | corecount: 8
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | event service: False
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | sizes: {0: 2396715, 1: 2397572, 5: 2397834, 11: 2397890, 4320: 2423938, 4322: 2432938, 4324: 2433122, 4329: 2433440}
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | --------------------------------------------------
[2025-07-24 22:15:35] 2025-07-25 02:15:02,351 | INFO     | 
[2025-07-24 22:15:35] 2025-07-25 02:15:02,352 | INFO     | executing command: ls -lF /tmp/boinchome/slots/15
[2025-07-24 22:15:35] 2025-07-25 02:15:02,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,369 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,369 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | job 6741798918 has completed (purged errors)
[2025-07-24 22:15:35] 2025-07-25 02:15:02,370 | INFO     | overall cleanup function is called
[2025-07-24 22:15:35] 2025-07-25 02:15:02,866 | INFO     | PID=596311 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 22:15:35] 2025-07-25 02:15:02,867 | INFO     | .. there are 16 such processes running
[2025-07-24 22:15:35] 2025-07-25 02:15:03,377 | INFO     | --- collectZombieJob: --- 10, [602730]
[2025-07-24 22:15:35] 2025-07-25 02:15:03,377 | INFO     | zombie collector waiting for pid 602730
[2025-07-24 22:15:35] 2025-07-25 02:15:03,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 22:15:35] 2025-07-25 02:15:03,377 | INFO     | collected zombie processes
[2025-07-24 22:15:35] 2025-07-25 02:15:03,377 | INFO     | will attempt to kill all subprocesses of pid=602730
[2025-07-24 22:15:35] 2025-07-25 02:15:03,704 | INFO     | process IDs to be killed: [602730] (in reverse order)
[2025-07-24 22:15:35] 2025-07-25 02:15:03,816 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 22:15:35] 2025-07-25 02:15:03,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 22:15:35] 2025-07-25 02:15:03,831 | INFO     | did not find any defunct processes belonging to 602730
[2025-07-24 22:15:35] 2025-07-25 02:15:03,844 | INFO     | did not find any defunct processes belonging to 602730
[2025-07-24 22:15:35] 2025-07-25 02:15:03,844 | INFO     | ready for new job
[2025-07-24 22:15:35] 2025-07-25 02:15:03,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 22:15:35] 2025-07-25 02:15:03,845 | INFO     | ***************************************
[2025-07-24 22:15:35] 2025-07-25 02:15:03,846 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 22:15:35] 2025-07-25 02:15:03,846 | INFO     | ***************************************
[2025-07-24 22:15:35] 2025-07-25 02:15:03,846 | INFO     | 
[2025-07-24 22:15:35] 2025-07-25 02:15:03,850 | INFO     | architecture information:
[2025-07-24 22:15:35] 2025-07-25 02:15:03,850 | INFO     | executing command: cat /etc/os-release
[2025-07-24 22:15:35] 2025-07-25 02:15:03,863 | INFO     | cat /etc/os-release:
[2025-07-24 22:15:35] NAME="CentOS Linux"
[2025-07-24 22:15:35] VERSION="7 (Core)"
[2025-07-24 22:15:35] ID="centos"
[2025-07-24 22:15:35] ID_LIKE="rhel fedora"
[2025-07-24 22:15:35] VERSION_ID="7"
[2025-07-24 22:15:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 22:15:35] ANSI_COLOR="0;31"
[2025-07-24 22:15:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 22:15:35] HOME_URL="https://www.centos.org/"
[2025-07-24 22:15:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 22:15:35] 
[2025-07-24 22:15:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 22:15:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 22:15:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 22:15:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 22:15:35] 
[2025-07-24 22:15:35] 2025-07-25 02:15:03,863 | INFO     | ***************************************
[2025-07-24 22:15:35] 2025-07-25 02:15:04,366 | INFO     | executing command: df -mP /tmp/boinchome/slots/15
[2025-07-24 22:15:35] 2025-07-25 02:15:04,379 | INFO     | sufficient remaining disk space (165990629376 B)
[2025-07-24 22:15:35] 2025-07-25 02:15:04,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 22:15:35] 2025-07-25 02:15:04,380 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 22:15:35] 2025-07-25 02:15:04,380 | INFO     | update_server=False
[2025-07-24 22:15:35] 2025-07-25 02:15:04,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 22:15:35] 2025-07-25 02:15:04,477 | INFO     | all data control threads have been joined
[2025-07-24 22:15:35] 2025-07-25 02:15:04,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 22:15:35] 2025-07-25 02:15:04,686 | INFO     | aborting loop
[2025-07-24 22:15:35] 2025-07-25 02:15:04,784 | INFO     | all payload control threads have been joined
[2025-07-24 22:15:35] 2025-07-25 02:15:05,069 | INFO     | all job control threads have been joined
[2025-07-24 22:15:35] 2025-07-25 02:15:05,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 22:15:35] 2025-07-25 02:15:05,382 | INFO     | [job] retrieve thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:05,483 | INFO     | [data] control thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:05,580 | INFO     | [payload] validate_post thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:05,687 | INFO     | [job] job monitor thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:05,749 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:05,789 | INFO     | [payload] control thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:05,977 | INFO     | [data] copytool_in thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:06,075 | INFO     | [job] control thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:06,298 | INFO     | [job] validate thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:06,531 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:06,595 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:06,684 | INFO     | [payload] failed_post thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:07,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 22:15:35] 2025-07-25 02:15:07,360 | INFO     | [data] copytool_out thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:07,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 22:15:35] 2025-07-25 02:15:08,365 | INFO     | [job] queue monitor thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:11,793 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:14,792 | INFO     | job.realtimelogging is not enabled
[2025-07-24 22:15:35] 2025-07-25 02:15:15,797 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 22:15:35] 2025-07-25 02:15:17,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749008820032)>', '<ExcThread(monitor, started 139748169479936)>']
[2025-07-24 22:15:35] 2025-07-25 02:15:22,160 | INFO     | all workflow threads have been joined
[2025-07-24 22:15:35] 2025-07-25 02:15:22,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 22:15:35] 2025-07-25 02:15:22,160 | INFO     | traces error code: 0
[2025-07-24 22:15:35] 2025-07-25 02:15:22,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 22:15:35] 2025-07-25 02:15:35,343 | INFO     | PID=596311 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 22:15:35] 2025-07-25 02:15:35,343 | INFO     | .. there are 16 such processes running
[2025-07-24 22:15:35] 2025-07-25 02:15:35,344 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 22:15:35] 2025-07-25 02:15:35,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 22:15:35] 2025-07-25 02:15:35,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 22:15:35] 2025-07-25 02:15:35,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 22:15:35] 2025-07-25 02:15:35,344 | INFO     | [monitor] control thread has ended
[2025-07-24 22:15:35] 2025-07-25 02:15:35,431 [wrapper] ==== pilot stdout END ====
[2025-07-24 22:15:35] 2025-07-25 02:15:35,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 22:15:35] 2025-07-25 02:15:35,438 [wrapper] pilotpid: 596311
[2025-07-24 22:15:35] 2025-07-25 02:15:35,441 [wrapper] Pilot exit status: 0
[2025-07-24 22:15:35] 2025-07-25 02:15:35,452 [wrapper] pandaids: 6741798918
[2025-07-24 22:15:35] 2025-07-25 02:15:35,534 [wrapper] cleanup supervisor_pilot  945635 596312
[2025-07-24 22:15:35] 2025-07-25 02:15:35,537 [wrapper] Test setup, not cleaning
[2025-07-24 22:15:35] 2025-07-25 02:15:35,540 [wrapper] apfmon messages muted
[2025-07-24 22:15:35] 2025-07-25 02:15:35,542 [wrapper] ==== wrapper stdout END ====
[2025-07-24 22:15:35] 2025-07-25 02:15:35,544 [wrapper] ==== wrapper stderr END ====
[2025-07-24 22:15:35]  *** Error codes and diagnostics ***
[2025-07-24 22:15:35]     "exeErrorCode": 0,
[2025-07-24 22:15:35]     "exeErrorDiag": "",
[2025-07-24 22:15:35]     "pilotErrorCode": 0,
[2025-07-24 22:15:35]     "pilotErrorDiag": "",
[2025-07-24 22:15:35]  *** Listing of results directory ***
[2025-07-24 22:15:35] total 607556
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 18:22 pilot3.tar.gz
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 18:49 queuedata.json
[2025-07-24 22:15:35] -rwx------. 1 boincer umatlas     36292 Jul 21 18:49 runpilot2-wrapper.sh
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas       100 Jul 24 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 22:15:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 21:02 run_atlas
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas       105 Jul 24 21:02 job.xml
[2025-07-24 22:15:35] -rw-r--r--. 2 boincer umatlas 332054597 Jul 24 21:02 EVNT.45697530._000071.pool.root.1
[2025-07-24 22:15:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 21:02 start_atlas.sh
[2025-07-24 22:15:35] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 21:02 shared
[2025-07-24 22:15:35] -rw-r--r--. 2 boincer umatlas    542902 Jul 24 21:02 input.tar.gz
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas         0 Jul 24 21:02 boinc_lockfile
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas      2611 Jul 24 21:02 pandaJob.out
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas    979709 Jul 24 21:02 agis_schedconf.cvmfs.json
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas   1593052 Jul 24 21:02 agis_ddmendpoints.agis.ALL.json
[2025-07-24 22:15:35] drwx------. 4 boincer umatlas      4096 Jul 24 21:02 pilot3
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas      7173 Jul 24 22:09 init_data.xml
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas 284730405 Jul 24 22:14 HITS.45697532._001764.pool.root.1
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas       529 Jul 24 22:14 boinc_task_state.xml
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas      1029 Jul 24 22:14 memory_monitor_summary.json
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas    305029 Jul 24 22:14 log.45697532._001764.job.log.tgz.1
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas      7760 Jul 24 22:15 heartbeat.json
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 22:15 boinc_mmap_file
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas        27 Jul 24 22:15 wrapper_checkpoint.txt
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas        95 Jul 24 22:15 pilot_heartbeat.json
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas       822 Jul 24 22:15 pilotlog.txt
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas    433475 Jul 24 22:15 log.45697532._001764.job.log.1
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas       357 Jul 24 22:15 output.list
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas       620 Jul 24 22:15 runtime_log
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas    757760 Jul 24 22:15 result.tar.gz
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas       652 Jul 24 22:15 vl3LDmiVEy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn5GLDm4KAnsm.diag
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas      8674 Jul 24 22:15 runtime_log.err
[2025-07-24 22:15:35] -rw-r--r--. 1 boincer umatlas     22720 Jul 24 22:15 stderr.txt
[2025-07-24 22:15:35] HITS file was successfully produced:
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas 284730405 Jul 24 22:14 shared/HITS.pool.root.1
[2025-07-24 22:15:35]  *** Contents of shared directory: ***
[2025-07-24 22:15:35] total 603628
[2025-07-24 22:15:35] -rw-r--r--. 2 boincer umatlas 332054597 Jul 24 21:02 ATLAS.root_0
[2025-07-24 22:15:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 21:02 start_atlas.sh
[2025-07-24 22:15:35] -rw-r--r--. 2 boincer umatlas    542902 Jul 24 21:02 input.tar.gz
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas 284730405 Jul 24 22:14 HITS.pool.root.1
[2025-07-24 22:15:35] -rw-------. 1 boincer umatlas    757760 Jul 24 22:15 result.tar.gz
22:15:37 (592715): run_atlas exited; CPU time 32685.369181
22:15:37 (592715): called boinc_finish(0)

</stderr_txt>
]]>

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