Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:21:43 (2230656): wrapper (7.7.26015): starting
08:21:43 (2230656): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 08:21:43] Arguments: --nthreads 8
[2025-07-25 08:21:43] Threads: 8
[2025-07-25 08:21:43] Checking for CVMFS
[2025-07-25 08:21:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 08:21:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 08:21:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 08:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 08:21:44] 2.13.0.0 825911 4685 65188 148730 2 56 4019597 4097024 0 130560 0 3220558 99.988 183133 28654 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-25 08:21:44] CVMFS is ok
[2025-07-25 08:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 08:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 08:21:44] Further information can be found at the LHC@home message board.
[2025-07-25 08:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 08:21:44] Checking for apptainer binary...
[2025-07-25 08:21:44] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-25 08:21:44] apptainer is not installed, using version from CVMFS
[2025-07-25 08:21:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 08:21:44] pckeatlas02
[2025-07-25 08:21:44] apptainer works
[2025-07-25 08:21:44] Set ATHENA_PROC_NUMBER=8
[2025-07-25 08:21:44] Set ATHENA_CORE_NUMBER=8
[2025-07-25 08:21:44] Starting ATLAS job with PandaID=6744925757
[2025-07-25 08:21:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 09:53:30]  *** The last 200 lines of the pilot log: ***
[2025-07-25 09:53:30]  guid=90a40fb5-ba9e-424f-a2df-9853d2d5bd88
[2025-07-25 09:53:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-25 09:53:30]  is_altstaged=None
[2025-07-25 09:53:30]  is_tar=False
[2025-07-25 09:53:30]  lfn=log.45743349._007575.job.log.tgz.1
[2025-07-25 09:53:30]  mtime=0
[2025-07-25 09:53:30]  protocol_id=None
[2025-07-25 09:53:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 09:53:30]  replicas=None
[2025-07-25 09:53:30]  scope=mc23_13p6TeV
[2025-07-25 09:53:30]  status=None
[2025-07-25 09:53:30]  status_code=0
[2025-07-25 09:53:30]  storage_token=
[2025-07-25 09:53:30]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6744925757/log.45743349._007575.job.log.tgz.1
[2025-07-25 09:53:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/38/log.45743349._007575.job.log.tgz.1
[2025-07-25 09:53:30]  workdir=None
[2025-07-25 09:53:30] ]
[2025-07-25 09:53:30] 2025-07-25 07:52:55,457 | INFO     | transferring file log.45743349._007575.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6744925757/log.45743349._007575.job.log.tgz.1 to /var/lib/boinc/slots
[2025-07-25 09:53:30] 2025-07-25 07:52:55,457 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6744925757/log.45743349._007575.job.log.tgz.1 /var/lib/boinc/slots/19/log.45743349._007575.j
[2025-07-25 09:53:30] 2025-07-25 07:52:55,465 | INFO     | adding to output.list: log.45743349._007575.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/38/log.45743349._007575.job.log.tg
[2025-07-25 09:53:30] 2025-07-25 07:52:55,465 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 09:53:30] 2025-07-25 07:52:55,465 | INFO     | summary of transferred files:
[2025-07-25 09:53:30] 2025-07-25 07:52:55,465 | INFO     |  -- lfn=log.45743349._007575.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 09:53:30] 2025-07-25 07:52:55,465 | INFO     | stage-out finished correctly
[2025-07-25 09:53:30] 2025-07-25 07:52:56,493 | INFO     | PID=2234330 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 09:53:30] 2025-07-25 07:52:56,517 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 09:53:30] 2025-07-25 07:52:57,333 | INFO     | monitor loop #416: job 0:6744925757 is in state 'finished'
[2025-07-25 09:53:30] 2025-07-25 07:52:57,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 09:53:30] 2025-07-25 07:52:57,854 | INFO     | job 6744925757 has state=finished
[2025-07-25 09:53:30] 2025-07-25 07:52:57,854 | INFO     | preparing for final server update for job 6744925757 in state='finished'
[2025-07-25 09:53:30] 2025-07-25 07:52:57,855 | INFO     | this job has now completed (state=finished)
[2025-07-25 09:53:30] 2025-07-25 07:52:57,855 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 09:53:30] 2025-07-25 07:52:57,855 | INFO     | log transfer has been attempted: DONE
[2025-07-25 09:53:30] 2025-07-25 07:52:57,855 | INFO     | job 6744925757 has finished - writing final server update
[2025-07-25 09:53:30] 2025-07-25 07:52:57,855 | INFO     | total number of processed events: 400 (read)
[2025-07-25 09:53:30] 2025-07-25 07:52:57,855 | INFO     | executing command: lscpu
[2025-07-25 09:53:30] 2025-07-25 07:52:57,863 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 09:53:30] 2025-07-25 07:52:59,194 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 09:53:30] 2025-07-25 07:52:59,195 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3863.503875
[2025-07-25 09:53:30] 2025-07-25 07:52:59,196 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6744925757/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 09:53:30] 2025-07-25 07:52:59,196 | INFO     | extracted standard info from prmon json
[2025-07-25 09:53:30] 2025-07-25 07:52:59,196 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 09:53:30] 2025-07-25 07:52:59,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 09:53:30] 2025-07-25 07:52:59,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 09:53:30] 2025-07-25 07:52:59,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | fitting pss+swap vs Time
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | sum of square deviations: 177275882.0
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | sum of deviations: -20858769135.0
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | mean x: 1753427332.0
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | mean y: 2796956.6506024096
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | -- intersect: 206315892119.7422
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | intersect: 206315892119.7422
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | chi2: 0.1269077651367252
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | -- intersect: 206315892119.7422
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | current memory leak: -117.66 B/s (using 83 data points, chi2=0.13)
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | could have reported an average CPU frequency of 3769 MHz (7 samples)
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | ..............................
[2025-07-25 09:53:30] 2025-07-25 07:52:59,198 | INFO     | . Timing measurements:
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | . get job = 0 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | . initial setup = 0 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | . payload setup = 2 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | . stage-in = 0 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | . payload execution = 5447 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | . stage-out = 0 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | . log creation = 0 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,199 | INFO     | ..............................
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | 
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | job summary report
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | --------------------------------------------------
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | PanDA job id: 6744925757
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | task id: 45743349
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | errors: (none)
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | pilot state: finished 
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | transexitcode: 0
[2025-07-25 09:53:30] 2025-07-25 07:52:59,325 | INFO     | exeerrorcode: 0
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | exeerrordiag: 
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | exitcode: 0
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | exitmsg: OK
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | cpuconsumptiontime: 41344 s
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | nevents: 400
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | neventsw: 0
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | pid: 2241456
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | pgrp: 2241456
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | corecount: 8
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | event service: False
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | sizes: {0: 2397471, 2: 2397733, 11: 2397761, 5454: 2424418, 5455: 2433473, 5456: 2433473, 5459: 2433795}
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | --------------------------------------------------
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | 
[2025-07-25 09:53:30] 2025-07-25 07:52:59,326 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-07-25 09:53:30] 2025-07-25 07:52:59,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | job 6744925757 has completed (purged errors)
[2025-07-25 09:53:30] 2025-07-25 07:52:59,334 | INFO     | overall cleanup function is called
[2025-07-25 09:53:30] 2025-07-25 07:53:00,340 | INFO     | --- collectZombieJob: --- 10, [2241456]
[2025-07-25 09:53:30] 2025-07-25 07:53:00,341 | INFO     | zombie collector waiting for pid 2241456
[2025-07-25 09:53:30] 2025-07-25 07:53:00,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 09:53:30] 2025-07-25 07:53:00,341 | INFO     | collected zombie processes
[2025-07-25 09:53:30] 2025-07-25 07:53:00,341 | INFO     | will attempt to kill all subprocesses of pid=2241456
[2025-07-25 09:53:30] 2025-07-25 07:53:00,372 | INFO     | process IDs to be killed: [2241456] (in reverse order)
[2025-07-25 09:53:30] 2025-07-25 07:53:00,387 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 09:53:30] 2025-07-25 07:53:00,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 09:53:30] 2025-07-25 07:53:00,389 | INFO     | did not find any defunct processes belonging to 2241456
[2025-07-25 09:53:30] 2025-07-25 07:53:00,389 | INFO     | did not find any defunct processes belonging to 2241456
[2025-07-25 09:53:30] 2025-07-25 07:53:00,389 | INFO     | ready for new job
[2025-07-25 09:53:30] 2025-07-25 07:53:00,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 09:53:30] 2025-07-25 07:53:00,390 | INFO     | ***************************************
[2025-07-25 09:53:30] 2025-07-25 07:53:00,390 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 09:53:30] 2025-07-25 07:53:00,390 | INFO     | ***************************************
[2025-07-25 09:53:30] 2025-07-25 07:53:00,390 | INFO     | 
[2025-07-25 09:53:30] 2025-07-25 07:53:00,391 | INFO     | architecture information:
[2025-07-25 09:53:30] 2025-07-25 07:53:00,391 | INFO     | executing command: cat /etc/os-release
[2025-07-25 09:53:30] 2025-07-25 07:53:00,396 | INFO     | cat /etc/os-release:
[2025-07-25 09:53:30] NAME="CentOS Linux"
[2025-07-25 09:53:30] VERSION="7 (Core)"
[2025-07-25 09:53:30] ID="centos"
[2025-07-25 09:53:30] ID_LIKE="rhel fedora"
[2025-07-25 09:53:30] VERSION_ID="7"
[2025-07-25 09:53:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 09:53:30] ANSI_COLOR="0;31"
[2025-07-25 09:53:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 09:53:30] HOME_URL="https://www.centos.org/"
[2025-07-25 09:53:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 09:53:30] 
[2025-07-25 09:53:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 09:53:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 09:53:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 09:53:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 09:53:30] 
[2025-07-25 09:53:30] 2025-07-25 07:53:00,396 | INFO     | ***************************************
[2025-07-25 09:53:30] 2025-07-25 07:53:00,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-07-25 09:53:30] 2025-07-25 07:53:00,905 | INFO     | sufficient remaining disk space (123357626368 B)
[2025-07-25 09:53:30] 2025-07-25 07:53:00,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 09:53:30] 2025-07-25 07:53:00,906 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 09:53:30] 2025-07-25 07:53:00,906 | INFO     | update_server=False
[2025-07-25 09:53:30] 2025-07-25 07:53:00,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 09:53:30] 2025-07-25 07:53:00,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 09:53:30] 2025-07-25 07:53:00,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 09:53:30] 2025-07-25 07:53:00,906 | INFO     | aborting loop
[2025-07-25 09:53:30] 2025-07-25 07:53:01,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 09:53:30] 2025-07-25 07:53:01,472 | INFO     | all payload control threads have been joined
[2025-07-25 09:53:30] 2025-07-25 07:53:01,598 | INFO     | all data control threads have been joined
[2025-07-25 09:53:30] 2025-07-25 07:53:01,911 | INFO     | [job] retrieve thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:01,911 | INFO     | [job] queue monitor thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:01,911 | INFO     | [job] job monitor thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:01,927 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:01,929 | INFO     | [payload] failed_post thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:01,974 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:01,985 | INFO     | all job control threads have been joined
[2025-07-25 09:53:30] 2025-07-25 07:53:02,071 | INFO     | [data] copytool_in thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:02,472 | INFO     | [payload] control thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:02,541 | INFO     | [payload] validate_post thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:02,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 09:53:30] 2025-07-25 07:53:02,603 | INFO     | [data] control thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:02,987 | INFO     | [job] control thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:03,015 | INFO     | [data] copytool_out thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:03,282 | INFO     | [job] validate thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:03,290 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:06,564 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:11,911 | INFO     | job.realtimelogging is not enabled
[2025-07-25 09:53:30] 2025-07-25 07:53:12,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 09:53:30] 2025-07-25 07:53:13,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084272539456)>', '<ExcThread(monitor, started 140083294361344)>']
[2025-07-25 09:53:30] 2025-07-25 07:53:18,546 | INFO     | all workflow threads have been joined
[2025-07-25 09:53:30] 2025-07-25 07:53:18,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 09:53:30] 2025-07-25 07:53:18,546 | INFO     | traces error code: 0
[2025-07-25 09:53:30] 2025-07-25 07:53:18,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 09:53:30] 2025-07-25 07:53:30,624 | INFO     | PID=2234330 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 09:53:30] 2025-07-25 07:53:30,625 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 09:53:30] 2025-07-25 07:53:30,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 09:53:30] 2025-07-25 07:53:30,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 09:53:30] 2025-07-25 07:53:30,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 09:53:30] 2025-07-25 07:53:30,625 | INFO     | [monitor] control thread has ended
[2025-07-25 09:53:30] 2025-07-25 07:53:30,682 [wrapper] ==== pilot stdout END ====
[2025-07-25 09:53:30] 2025-07-25 07:53:30,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 09:53:30] 2025-07-25 07:53:30,684 [wrapper] pilotpid: 2234330
[2025-07-25 09:53:30] 2025-07-25 07:53:30,685 [wrapper] Pilot exit status: 0
[2025-07-25 09:53:30] 2025-07-25 07:53:30,689 [wrapper] pandaids: 6744925757
[2025-07-25 09:53:30] 2025-07-25 07:53:30,698 [wrapper] cleanup supervisor_pilot 2258224 2234331
[2025-07-25 09:53:30] 2025-07-25 07:53:30,699 [wrapper] Test setup, not cleaning
[2025-07-25 09:53:30] 2025-07-25 07:53:30,700 [wrapper] apfmon messages muted
[2025-07-25 09:53:30] 2025-07-25 07:53:30,701 [wrapper] ==== wrapper stdout END ====
[2025-07-25 09:53:30] 2025-07-25 07:53:30,702 [wrapper] ==== wrapper stderr END ====
[2025-07-25 09:53:30]  *** Error codes and diagnostics ***
[2025-07-25 09:53:30]     "exeErrorCode": 0,
[2025-07-25 09:53:30]     "exeErrorDiag": "",
[2025-07-25 09:53:30]     "pilotErrorCode": 0,
[2025-07-25 09:53:30]     "pilotErrorDiag": "",
[2025-07-25 09:53:30]  *** Listing of results directory ***
[2025-07-25 09:53:30] total 435504
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc    530466 Jul 24 21:13 pilot3.tar.gz
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc      5112 Jul 24 21:24 queuedata.json
[2025-07-25 09:53:30] -rwx------. 1 boinc boinc     36292 Jul 24 21:25 runpilot2-wrapper.sh
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc       100 Jul 25 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 09:53:30] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 08:21 run_atlas
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc       105 Jul 25 08:21 job.xml
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc      6275 Jul 25 08:21 init_data.xml
[2025-07-25 09:53:30] -rw-r--r--. 2 boinc boinc 232596085 Jul 25 08:21 EVNT.45743347._000398.pool.root.1
[2025-07-25 09:53:30] drwxrwx--x. 2 boinc boinc        68 Jul 25 08:21 shared
[2025-07-25 09:53:30] -rw-r--r--. 2 boinc boinc    542886 Jul 25 08:21 input.tar.gz
[2025-07-25 09:53:30] -rw-r--r--. 2 boinc boinc     15095 Jul 25 08:21 start_atlas.sh
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc         0 Jul 25 08:21 boinc_lockfile
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc      2561 Jul 25 08:21 pandaJob.out
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc    979701 Jul 25 08:21 agis_schedconf.cvmfs.json
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc   1593052 Jul 25 08:21 agis_ddmendpoints.agis.ALL.json
[2025-07-25 09:53:30] drwx------. 4 boinc boinc      4096 Jul 25 08:21 pilot3
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc 207832899 Jul 25 09:52 HITS.45743349._007575.pool.root.1
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc       529 Jul 25 09:52 boinc_task_state.xml
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc      1014 Jul 25 09:52 memory_monitor_summary.json
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc    303163 Jul 25 09:52 log.45743349._007575.job.log.tgz.1
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc      7776 Jul 25 09:52 heartbeat.json
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc      8192 Jul 25 09:53 boinc_mmap_file
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc        27 Jul 25 09:53 wrapper_checkpoint.txt
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc       747 Jul 25 09:53 pilotlog.txt
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc        95 Jul 25 09:53 pilot_heartbeat.json
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc    527229 Jul 25 09:53 log.45743349._007575.job.log.1
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc       357 Jul 25 09:53 output.list
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc       620 Jul 25 09:53 runtime_log
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc    849920 Jul 25 09:53 result.tar.gz
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc      8687 Jul 25 09:53 runtime_log.err
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc       649 Jul 25 09:53 IuULDmTkGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDLNLDmOEll0m.diag
[2025-07-25 09:53:30] -rw-r--r--. 1 boinc boinc     21562 Jul 25 09:53 stderr.txt
[2025-07-25 09:53:30] HITS file was successfully produced:
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc 207832899 Jul 25 09:52 shared/HITS.pool.root.1
[2025-07-25 09:53:30]  *** Contents of shared directory: ***
[2025-07-25 09:53:30] total 431492
[2025-07-25 09:53:30] -rw-r--r--. 2 boinc boinc 232596085 Jul 25 08:21 ATLAS.root_0
[2025-07-25 09:53:30] -rw-r--r--. 2 boinc boinc    542886 Jul 25 08:21 input.tar.gz
[2025-07-25 09:53:30] -rw-r--r--. 2 boinc boinc     15095 Jul 25 08:21 start_atlas.sh
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc 207832899 Jul 25 09:52 HITS.pool.root.1
[2025-07-25 09:53:30] -rw-------. 1 boinc boinc    849920 Jul 25 09:53 result.tar.gz
09:53:32 (2230656): run_atlas exited; CPU time 41386.762953
09:53:32 (2230656): called boinc_finish(0)

</stderr_txt>
]]>

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