Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:06:40 (3333457): wrapper (7.7.26015): starting
11:06:40 (3333457): wrapper: running run_atlas (--nthreads 3)
[2025-07-25 11:06:40] Arguments: --nthreads 3
[2025-07-25 11:06:40] Threads: 3
[2025-07-25 11:06:40] Checking for CVMFS
[2025-07-25 11:06:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 11:06:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 11:06:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 11:06:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 11:06:40] 2.9.2.0 2836443 976 72000 148732 1 57 20413546 36864001 0 130560 0 722902 99.987 38690 3437 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-25 11:06:40] CVMFS is ok
[2025-07-25 11:06:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 11:06:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 11:06:40] Further information can be found at the LHC@home message board.
[2025-07-25 11:06:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 11:06:40] Checking for apptainer binary...
[2025-07-25 11:06:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 11:06:40] Running /usr/bin/apptainer --version
[2025-07-25 11:06:40] apptainer version 1.3.6-6.1
[2025-07-25 11:06:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 11:06:40] atlasA303
[2025-07-25 11:06:40] apptainer works
[2025-07-25 11:06:40] Set ATHENA_PROC_NUMBER=3
[2025-07-25 11:06:40] Set ATHENA_CORE_NUMBER=3
[2025-07-25 11:06:40] Starting ATLAS job with PandaID=6744916929
[2025-07-25 11:06:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:42:05]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:42:05]  scope=mc23_13p6TeV
[2025-07-25 12:42:05]  status=None
[2025-07-25 12:42:05]  status_code=0
[2025-07-25 12:42:05]  storage_token=
[2025-07-25 12:42:05]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744916929/log.45743349._005065.job.log.tgz.1
[2025-07-25 12:42:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/0b/log.45743349._005065.job.log.tgz.1
[2025-07-25 12:42:05]  workdir=None
[2025-07-25 12:42:05] ]
[2025-07-25 12:42:05] 2025-07-25 10:41:31,233 | INFO     | transferring file log.45743349._005065.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744916929/log.45743349._005065.job.log.tgz.1 to /local/data/boinc/
[2025-07-25 12:42:05] 2025-07-25 10:41:31,233 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744916929/log.45743349._005065.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0050
[2025-07-25 12:42:05] 2025-07-25 10:41:31,246 | INFO     | adding to output.list: log.45743349._005065.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/0b/log.45743349._005065.job.log.tg
[2025-07-25 12:42:05] 2025-07-25 10:41:31,247 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 12:42:05] 2025-07-25 10:41:31,247 | INFO     | summary of transferred files:
[2025-07-25 12:42:05] 2025-07-25 10:41:31,247 | INFO     |  -- lfn=log.45743349._005065.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 12:42:05] 2025-07-25 10:41:31,247 | INFO     | stage-out finished correctly
[2025-07-25 12:42:05] 2025-07-25 10:41:31,278 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 12:42:05] 2025-07-25 10:41:31,897 | INFO     | job 6744916929 has state=finished
[2025-07-25 12:42:05] 2025-07-25 10:41:31,898 | INFO     | preparing for final server update for job 6744916929 in state='finished'
[2025-07-25 12:42:05] 2025-07-25 10:41:31,898 | INFO     | this job has now completed (state=finished)
[2025-07-25 12:42:05] 2025-07-25 10:41:31,898 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 12:42:05] 2025-07-25 10:41:31,898 | INFO     | log transfer has been attempted: DONE
[2025-07-25 12:42:05] 2025-07-25 10:41:31,898 | INFO     | job 6744916929 has finished - writing final server update
[2025-07-25 12:42:05] 2025-07-25 10:41:31,898 | INFO     | total number of processed events: 400 (read)
[2025-07-25 12:42:05] 2025-07-25 10:41:31,899 | INFO     | executing command: lscpu
[2025-07-25 12:42:05] 2025-07-25 10:41:31,916 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 12:42:05] 2025-07-25 10:41:34,364 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 12:42:05] 2025-07-25 10:41:34,365 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3698.291833333334
[2025-07-25 12:42:05] 2025-07-25 10:41:34,366 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744916929/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:42:05] 2025-07-25 10:41:34,367 | INFO     | extracted standard info from prmon json
[2025-07-25 12:42:05] 2025-07-25 10:41:34,367 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 12:42:05] 2025-07-25 10:41:34,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 12:42:05] 2025-07-25 10:41:34,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:42:05] 2025-07-25 10:41:34,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | fitting pss+swap vs Time
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | sum of square deviations: 197203697.5
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | sum of deviations: -469884464.0
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | mean x: 1753437323.5
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | mean y: 2360696.7441860465
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | -- intersect: 4180339950.4566684
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | intersect: 4180339950.4566684
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | chi2: 0.013228055754530954
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | -- intersect: 4180339950.4566684
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | current memory leak: -2.38 B/s (using 86 data points, chi2=0.01)
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | could have reported an average CPU frequency of 3903 MHz (7 samples)
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | ..............................
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | . Timing measurements:
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | . get job = 0 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | . initial setup = 1 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | . payload setup = 3 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,368 | INFO     | . stage-in = 0 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,369 | INFO     | . payload execution = 5664 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,369 | INFO     | . stage-out = 0 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,369 | INFO     | . log creation = 0 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,369 | INFO     | ..............................
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | 
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | job summary report
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | --------------------------------------------------
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | PanDA job id: 6744916929
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | task id: 45743349
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | errors: (none)
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | pilot state: finished 
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | transexitcode: 0
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | exeerrorcode: 0
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | exeerrordiag: 
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | exitcode: 0
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | exitmsg: OK
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | cpuconsumptiontime: 16326 s
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | nevents: 400
[2025-07-25 12:42:05] 2025-07-25 10:41:34,400 | INFO     | neventsw: 0
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | pid: 3343688
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | pgrp: 3343688
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | corecount: 3
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | event service: False
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | sizes: {0: 2396642, 1: 2397501, 3: 2397763, 11: 2397791, 5671: 2433572, 5672: 2433572, 5675: 2433894}
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | --------------------------------------------------
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | 
[2025-07-25 12:42:05] 2025-07-25 10:41:34,401 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | job 6744916929 has completed (purged errors)
[2025-07-25 12:42:05] 2025-07-25 10:41:34,415 | INFO     | overall cleanup function is called
[2025-07-25 12:42:05] 2025-07-25 10:41:35,326 | WARNING  | process 3343688 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 12:42:05] 2025-07-25 10:41:35,358 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:42:05] 2025-07-25 10:41:35,358 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 12:42:05] 2025-07-25 10:41:35,358 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6744916929/payload.stdout) since it has not been created yet
[2025-07-25 12:42:05] 2025-07-25 10:41:35,358 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-25 12:42:05] 2025-07-25 10:41:35,370 | INFO     | sufficient remaining disk space (380586950656 B)
[2025-07-25 12:42:05] 2025-07-25 10:41:35,370 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-07-25 12:42:05] 2025-07-25 10:41:35,370 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6744916929/HITS.45743349._005065.pool.root.1 since it does not exist
[2025-07-25 12:42:05] 2025-07-25 10:41:35,411 | INFO     | number of running child processes to parent process 3343688: 1
[2025-07-25 12:42:05] 2025-07-25 10:41:35,411 | INFO     | maximum number of monitored processes: 6
[2025-07-25 12:42:05] 2025-07-25 10:41:35,411 | INFO     | aborting job monitoring since job object (job id=6744916929) has expired
[2025-07-25 12:42:05] 2025-07-25 10:41:35,421 | INFO     | --- collectZombieJob: --- 10, [3343688]
[2025-07-25 12:42:05] 2025-07-25 10:41:35,421 | INFO     | zombie collector waiting for pid 3343688
[2025-07-25 12:42:05] 2025-07-25 10:41:35,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:42:05] 2025-07-25 10:41:35,421 | INFO     | collected zombie processes
[2025-07-25 12:42:05] 2025-07-25 10:41:35,421 | INFO     | will attempt to kill all subprocesses of pid=3343688
[2025-07-25 12:42:05] 2025-07-25 10:41:35,461 | INFO     | process IDs to be killed: [3343688] (in reverse order)
[2025-07-25 12:42:05] 2025-07-25 10:41:35,488 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:42:05] 2025-07-25 10:41:35,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:42:05] 2025-07-25 10:41:35,490 | INFO     | did not find any defunct processes belonging to 3343688
[2025-07-25 12:42:05] 2025-07-25 10:41:35,491 | INFO     | did not find any defunct processes belonging to 3343688
[2025-07-25 12:42:05] 2025-07-25 10:41:35,491 | INFO     | ready for new job
[2025-07-25 12:42:05] 2025-07-25 10:41:35,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:42:05] 2025-07-25 10:41:35,491 | INFO     | ***************************************
[2025-07-25 12:42:05] 2025-07-25 10:41:35,492 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:42:05] 2025-07-25 10:41:35,492 | INFO     | ***************************************
[2025-07-25 12:42:05] 2025-07-25 10:41:35,492 | INFO     | 
[2025-07-25 12:42:05] 2025-07-25 10:41:35,492 | INFO     | architecture information:
[2025-07-25 12:42:05] 2025-07-25 10:41:35,492 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:42:05] 2025-07-25 10:41:35,501 | INFO     | cat /etc/os-release:
[2025-07-25 12:42:05] NAME="CentOS Linux"
[2025-07-25 12:42:05] VERSION="7 (Core)"
[2025-07-25 12:42:05] ID="centos"
[2025-07-25 12:42:05] ID_LIKE="rhel fedora"
[2025-07-25 12:42:05] VERSION_ID="7"
[2025-07-25 12:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:42:05] ANSI_COLOR="0;31"
[2025-07-25 12:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:42:05] HOME_URL="https://www.centos.org/"
[2025-07-25 12:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:42:05] 
[2025-07-25 12:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:42:05] 
[2025-07-25 12:42:05] 2025-07-25 10:41:35,502 | INFO     | ***************************************
[2025-07-25 12:42:05] 2025-07-25 10:41:36,005 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | INFO     | sufficient remaining disk space (380586950656 B)
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | INFO     | update_server=False
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:42:05] 2025-07-25 10:41:36,019 | INFO     | will abort loop
[2025-07-25 12:42:05] 2025-07-25 10:41:36,038 | INFO     | all data control threads have been joined
[2025-07-25 12:42:05] 2025-07-25 10:41:36,287 | INFO     | all payload control threads have been joined
[2025-07-25 12:42:05] 2025-07-25 10:41:36,644 | INFO     | all job control threads have been joined
[2025-07-25 12:42:05] 2025-07-25 10:41:36,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:42:05] 2025-07-25 10:41:36,965 | INFO     | job.realtimelogging is not enabled
[2025-07-25 12:42:05] 2025-07-25 10:41:37,025 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,025 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,025 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,044 | INFO     | [data] control thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,293 | INFO     | [payload] control thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:42:05] 2025-07-25 10:41:37,353 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,372 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,650 | INFO     | [job] control thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,768 | INFO     | [job] validate thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,783 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,806 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,851 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,869 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:37,971 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:38,793 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:41,320 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:42:05] 2025-07-25 10:41:42,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417957607232)>', '<ExcThread(monitor, started 140417605543680)>']
[2025-07-25 12:42:05] 2025-07-25 10:41:47,095 | INFO     | all workflow threads have been joined
[2025-07-25 12:42:05] 2025-07-25 10:41:47,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:42:05] 2025-07-25 10:41:47,095 | INFO     | traces error code: 0
[2025-07-25 12:42:05] 2025-07-25 10:41:47,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:42:05] 2025-07-25 10:42:05,765 | INFO     | PID=3337133 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 12:42:05] 2025-07-25 10:42:05,765 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:42:05] 2025-07-25 10:42:05,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:42:05] 2025-07-25 10:42:05,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:42:05] 2025-07-25 10:42:05,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:42:05] 2025-07-25 10:42:05,765 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 12:42:05] 2025-07-25 10:42:05,765 | INFO     | [monitor] control thread has ended
[2025-07-25 12:42:05] 2025-07-25 10:42:05,815 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:42:05] 2025-07-25 10:42:05,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:42:05] 2025-07-25 10:42:05,821 [wrapper] pilotpid: 3337133
[2025-07-25 12:42:05] 2025-07-25 10:42:05,823 [wrapper] Pilot exit status: 0
[2025-07-25 12:42:05] 2025-07-25 10:42:05,831 [wrapper] pandaids: 6744916929
[2025-07-25 12:42:05] 2025-07-25 10:42:05,848 [wrapper] cleanup supervisor_pilot 3376897 3337134
[2025-07-25 12:42:05] 2025-07-25 10:42:05,851 [wrapper] Test setup, not cleaning
[2025-07-25 12:42:05] 2025-07-25 10:42:05,853 [wrapper] apfmon messages muted
[2025-07-25 12:42:05] 2025-07-25 10:42:05,856 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:42:05] 2025-07-25 10:42:05,858 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:42:05]  *** Error codes and diagnostics ***
[2025-07-25 12:42:05]     "exeErrorCode": 0,
[2025-07-25 12:42:05]     "exeErrorDiag": "",
[2025-07-25 12:42:05]     "pilotErrorCode": 0,
[2025-07-25 12:42:05]     "pilotErrorDiag": "",
[2025-07-25 12:42:05]  *** Listing of results directory ***
[2025-07-25 12:42:05] total 434204
[2025-07-25 12:42:05] -rwx------ 1 boinc boinc     36292 Jul 24 20:24 runpilot2-wrapper.sh
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc      5112 Jul 24 20:26 queuedata.json
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc    530466 Jul 24 20:26 pilot3.tar.gz
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc       100 Jul 25 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:42:05] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 11:06 run_atlas
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc       105 Jul 25 11:06 job.xml
[2025-07-25 12:42:05] -rw-r--r-- 2 boinc boinc 229712655 Jul 25 11:06 EVNT.45743347._000274.pool.root.1
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc      6932 Jul 25 11:06 init_data.xml
[2025-07-25 12:42:05] drwxrwx--x 2 boinc boinc      4096 Jul 25 11:06 shared
[2025-07-25 12:42:05] -rw-r--r-- 2 boinc boinc    542886 Jul 25 11:06 input.tar.gz
[2025-07-25 12:42:05] -rw-r--r-- 2 boinc boinc     15095 Jul 25 11:06 start_atlas.sh
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc         0 Jul 25 11:06 boinc_lockfile
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc      2561 Jul 25 11:06 pandaJob.out
[2025-07-25 12:42:05] -rw------- 1 boinc boinc    979709 Jul 25 11:06 agis_schedconf.cvmfs.json
[2025-07-25 12:42:05] -rw------- 1 boinc boinc   1593052 Jul 25 11:06 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:42:05] drwx------ 4 boinc boinc      4096 Jul 25 11:06 pilot3
[2025-07-25 12:42:05] -rw------- 1 boinc boinc 209473733 Jul 25 12:41 HITS.45743349._005065.pool.root.1
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc       529 Jul 25 12:41 boinc_task_state.xml
[2025-07-25 12:42:05] -rw------- 1 boinc boinc        95 Jul 25 12:41 pilot_heartbeat.json
[2025-07-25 12:42:05] -rw------- 1 boinc boinc      1029 Jul 25 12:41 memory_monitor_summary.json
[2025-07-25 12:42:05] -rw------- 1 boinc boinc    231130 Jul 25 12:41 log.45743349._005065.job.log.tgz.1
[2025-07-25 12:42:05] -rw------- 1 boinc boinc      7745 Jul 25 12:41 heartbeat.json
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc      8192 Jul 25 12:41 boinc_mmap_file
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc        27 Jul 25 12:41 wrapper_checkpoint.txt
[2025-07-25 12:42:05] -rw------- 1 boinc boinc       817 Jul 25 12:42 pilotlog.txt
[2025-07-25 12:42:05] -rw------- 1 boinc boinc    548181 Jul 25 12:42 log.45743349._005065.job.log.1
[2025-07-25 12:42:05] -rw------- 1 boinc boinc       357 Jul 25 12:42 output.list
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc       620 Jul 25 12:42 runtime_log
[2025-07-25 12:42:05] -rw------- 1 boinc boinc    798720 Jul 25 12:42 result.tar.gz
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc      8749 Jul 25 12:42 runtime_log.err
[2025-07-25 12:42:05] -rw------- 1 boinc boinc       661 Jul 25 12:42 EwbLDmqnFz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO0MLDm1UDWLo.diag
[2025-07-25 12:42:05] -rw-r--r-- 1 boinc boinc     22069 Jul 25 12:42 stderr.txt
[2025-07-25 12:42:05] HITS file was successfully produced:
[2025-07-25 12:42:05] -rw------- 1 boinc boinc 209473733 Jul 25 12:41 shared/HITS.pool.root.1
[2025-07-25 12:42:05]  *** Contents of shared directory: ***
[2025-07-25 12:42:05] total 430236
[2025-07-25 12:42:05] -rw-r--r-- 2 boinc boinc 229712655 Jul 25 11:06 ATLAS.root_0
[2025-07-25 12:42:05] -rw-r--r-- 2 boinc boinc    542886 Jul 25 11:06 input.tar.gz
[2025-07-25 12:42:05] -rw-r--r-- 2 boinc boinc     15095 Jul 25 11:06 start_atlas.sh
[2025-07-25 12:42:05] -rw------- 1 boinc boinc 209473733 Jul 25 12:41 HITS.pool.root.1
[2025-07-25 12:42:05] -rw------- 1 boinc boinc    798720 Jul 25 12:42 result.tar.gz
12:42:07 (3333457): run_atlas exited; CPU time 16345.710437
12:42:07 (3333457): called boinc_finish(0)

</stderr_txt>
]]>

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