Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:06:36 (2060576): wrapper (7.7.26015): starting
12:06:36 (2060576): wrapper: running run_atlas (--nthreads 3)
[2025-07-25 12:06:36] Arguments: --nthreads 3
[2025-07-25 12:06:36] Threads: 3
[2025-07-25 12:06:36] Checking for CVMFS
[2025-07-25 12:06:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:06:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:06:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:06:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:06:36] 2.9.2.0 842641 4927 78744 148736 1 57 31974483 36864001 0 130560 0 3221223 99.988 190957 2947 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-25 12:06:36] CVMFS is ok
[2025-07-25 12:06:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 12:06:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 12:06:36] Further information can be found at the LHC@home message board.
[2025-07-25 12:06:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:06:36] Checking for apptainer binary...
[2025-07-25 12:06:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:06:36] Running /usr/bin/apptainer --version
[2025-07-25 12:06:36] apptainer version 1.4.1-1.1
[2025-07-25 12:06:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:06:37] thA331b
[2025-07-25 12:06:37] apptainer works
[2025-07-25 12:06:37] Set ATHENA_PROC_NUMBER=3
[2025-07-25 12:06:37] Set ATHENA_CORE_NUMBER=3
[2025-07-25 12:06:37] Starting ATLAS job with PandaID=6744930533
[2025-07-25 12:06:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 13:40:10]  *** The last 200 lines of the pilot log: ***
[2025-07-25 13:40:10]  is_altstaged=None
[2025-07-25 13:40:10]  is_tar=False
[2025-07-25 13:40:10]  lfn=log.45743349._009292.job.log.tgz.1
[2025-07-25 13:40:10]  mtime=0
[2025-07-25 13:40:10]  protocol_id=None
[2025-07-25 13:40:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 13:40:10]  replicas=None
[2025-07-25 13:40:10]  scope=mc23_13p6TeV
[2025-07-25 13:40:10]  status=None
[2025-07-25 13:40:10]  status_code=0
[2025-07-25 13:40:10]  storage_token=
[2025-07-25 13:40:10]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744930533/log.45743349._009292.job.log.tgz.1
[2025-07-25 13:40:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/fd/log.45743349._009292.job.log.tgz.1
[2025-07-25 13:40:10]  workdir=None
[2025-07-25 13:40:10] ]
[2025-07-25 13:40:10] 2025-07-25 11:39:31,792 | INFO     | transferring file log.45743349._009292.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744930533/log.45743349._009292.job.log.tgz.1 to /local/data/boinc/
[2025-07-25 13:40:10] 2025-07-25 11:39:31,792 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744930533/log.45743349._009292.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0092
[2025-07-25 13:40:10] 2025-07-25 11:39:31,804 | INFO     | adding to output.list: log.45743349._009292.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/fd/log.45743349._009292.job.log.tg
[2025-07-25 13:40:10] 2025-07-25 11:39:31,804 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 13:40:10] 2025-07-25 11:39:31,804 | INFO     | summary of transferred files:
[2025-07-25 13:40:10] 2025-07-25 11:39:31,804 | INFO     |  -- lfn=log.45743349._009292.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 13:40:10] 2025-07-25 11:39:31,804 | INFO     | stage-out finished correctly
[2025-07-25 13:40:10] 2025-07-25 11:39:34,115 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 13:40:10] 2025-07-25 11:39:35,297 | INFO     | job 6744930533 has state=finished
[2025-07-25 13:40:10] 2025-07-25 11:39:35,298 | INFO     | preparing for final server update for job 6744930533 in state='finished'
[2025-07-25 13:40:10] 2025-07-25 11:39:35,298 | INFO     | this job has now completed (state=finished)
[2025-07-25 13:40:10] 2025-07-25 11:39:35,298 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 13:40:10] 2025-07-25 11:39:35,298 | INFO     | log transfer has been attempted: DONE
[2025-07-25 13:40:10] 2025-07-25 11:39:35,298 | INFO     | job 6744930533 has finished - writing final server update
[2025-07-25 13:40:10] 2025-07-25 11:39:35,298 | INFO     | total number of processed events: 400 (read)
[2025-07-25 13:40:10] 2025-07-25 11:39:35,299 | INFO     | executing command: lscpu
[2025-07-25 13:40:10] 2025-07-25 11:39:35,312 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 13:40:10] 2025-07-25 11:39:36,853 | WARNING  | process 2070693 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 13:40:10] 2025-07-25 11:39:36,853 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744930533/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 13:40:10] 2025-07-25 11:39:36,907 | INFO     | number of running child processes to parent process 2070693: 1
[2025-07-25 13:40:10] 2025-07-25 11:39:36,908 | INFO     | maximum number of monitored processes: 6
[2025-07-25 13:40:10] 2025-07-25 11:39:37,404 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 13:40:10] 2025-07-25 11:39:37,405 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3677.8042499999997
[2025-07-25 13:40:10] 2025-07-25 11:39:37,406 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744930533/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 13:40:10] 2025-07-25 11:39:37,406 | INFO     | extracted standard info from prmon json
[2025-07-25 13:40:10] 2025-07-25 11:39:37,406 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 13:40:10] 2025-07-25 11:39:37,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 13:40:10] 2025-07-25 11:39:37,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 13:40:10] 2025-07-25 11:39:37,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | fitting pss+swap vs Time
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | sum of square deviations: 183761585.0
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | sum of deviations: 1793927558.5
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | mean x: 1753440857.5
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | mean y: 2380410.7976190476
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | -- intersect: -17115157383.998402
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | intersect: -17115157383.998402
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | chi2: 0.01573680582124709
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | -- intersect: -17115157383.998402
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | current memory leak: 9.76 B/s (using 84 data points, chi2=0.02)
[2025-07-25 13:40:10] 2025-07-25 11:39:37,407 | INFO     | could have reported an average CPU frequency of 3963 MHz (7 samples)
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | ..............................
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . Timing measurements:
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . get job = 0 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . initial setup = 1 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . payload setup = 3 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . stage-in = 0 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . payload execution = 5548 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . stage-out = 0 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | . log creation = 0 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,408 | INFO     | ..............................
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | 
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | job summary report
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | --------------------------------------------------
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | PanDA job id: 6744930533
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | task id: 45743349
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | errors: (none)
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | pilot state: finished 
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | transexitcode: 0
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | exeerrorcode: 0
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | exeerrordiag: 
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | exitcode: 0
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | exitmsg: OK
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | cpuconsumptiontime: 15946 s
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | nevents: 400
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | neventsw: 0
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | pid: 2070693
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | pgrp: 2070693
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | corecount: 3
[2025-07-25 13:40:10] 2025-07-25 11:39:37,439 | INFO     | event service: False
[2025-07-25 13:40:10] 2025-07-25 11:39:37,440 | INFO     | sizes: {0: 2397472, 2: 2397734, 11: 2397762, 5555: 2424545, 5556: 2433549, 5559: 2433605, 5562: 2433927}
[2025-07-25 13:40:10] 2025-07-25 11:39:37,440 | INFO     | --------------------------------------------------
[2025-07-25 13:40:10] 2025-07-25 11:39:37,440 | INFO     | 
[2025-07-25 13:40:10] 2025-07-25 11:39:37,440 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | job 6744930533 has completed (purged errors)
[2025-07-25 13:40:10] 2025-07-25 11:39:37,451 | INFO     | overall cleanup function is called
[2025-07-25 13:40:10] 2025-07-25 11:39:38,457 | INFO     | --- collectZombieJob: --- 10, [2070693]
[2025-07-25 13:40:10] 2025-07-25 11:39:38,457 | INFO     | zombie collector waiting for pid 2070693
[2025-07-25 13:40:10] 2025-07-25 11:39:38,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 13:40:10] 2025-07-25 11:39:38,458 | INFO     | collected zombie processes
[2025-07-25 13:40:10] 2025-07-25 11:39:38,458 | INFO     | will attempt to kill all subprocesses of pid=2070693
[2025-07-25 13:40:10] 2025-07-25 11:39:38,496 | INFO     | process IDs to be killed: [2070693] (in reverse order)
[2025-07-25 13:40:10] 2025-07-25 11:39:38,518 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 13:40:10] 2025-07-25 11:39:38,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 13:40:10] 2025-07-25 11:39:38,519 | INFO     | did not find any defunct processes belonging to 2070693
[2025-07-25 13:40:10] 2025-07-25 11:39:38,520 | INFO     | did not find any defunct processes belonging to 2070693
[2025-07-25 13:40:10] 2025-07-25 11:39:38,520 | INFO     | ready for new job
[2025-07-25 13:40:10] 2025-07-25 11:39:38,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 13:40:10] 2025-07-25 11:39:38,521 | INFO     | ***************************************
[2025-07-25 13:40:10] 2025-07-25 11:39:38,521 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 13:40:10] 2025-07-25 11:39:38,521 | INFO     | ***************************************
[2025-07-25 13:40:10] 2025-07-25 11:39:38,521 | INFO     | 
[2025-07-25 13:40:10] 2025-07-25 11:39:38,521 | INFO     | architecture information:
[2025-07-25 13:40:10] 2025-07-25 11:39:38,521 | INFO     | executing command: cat /etc/os-release
[2025-07-25 13:40:10] 2025-07-25 11:39:38,529 | INFO     | cat /etc/os-release:
[2025-07-25 13:40:10] NAME="CentOS Linux"
[2025-07-25 13:40:10] VERSION="7 (Core)"
[2025-07-25 13:40:10] ID="centos"
[2025-07-25 13:40:10] ID_LIKE="rhel fedora"
[2025-07-25 13:40:10] VERSION_ID="7"
[2025-07-25 13:40:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 13:40:10] ANSI_COLOR="0;31"
[2025-07-25 13:40:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 13:40:10] HOME_URL="https://www.centos.org/"
[2025-07-25 13:40:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 13:40:10] 
[2025-07-25 13:40:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 13:40:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 13:40:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 13:40:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 13:40:10] 
[2025-07-25 13:40:10] 2025-07-25 11:39:38,530 | INFO     | ***************************************
[2025-07-25 13:40:10] 2025-07-25 11:39:39,033 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-25 13:40:10] 2025-07-25 11:39:39,044 | INFO     | sufficient remaining disk space (227771678720 B)
[2025-07-25 13:40:10] 2025-07-25 11:39:39,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 13:40:10] 2025-07-25 11:39:39,045 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 13:40:10] 2025-07-25 11:39:39,045 | INFO     | update_server=False
[2025-07-25 13:40:10] 2025-07-25 11:39:39,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 13:40:10] 2025-07-25 11:39:39,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:40:10] 2025-07-25 11:39:39,162 | INFO     | all job control threads have been joined
[2025-07-25 13:40:10] 2025-07-25 11:39:39,412 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 13:40:10] 2025-07-25 11:39:39,412 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 13:40:10] 2025-07-25 11:39:39,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 13:40:10] 2025-07-25 11:39:39,412 | INFO     | will abort loop
[2025-07-25 13:40:10] 2025-07-25 11:39:39,680 | INFO     | all data control threads have been joined
[2025-07-25 13:40:10] 2025-07-25 11:39:39,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 13:40:10] 2025-07-25 11:39:39,937 | INFO     | all payload control threads have been joined
[2025-07-25 13:40:10] 2025-07-25 11:39:40,050 | INFO     | [job] retrieve thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,051 | INFO     | [job] queue monitor thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,097 | INFO     | [data] copytool_in thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 13:40:10] 2025-07-25 11:39:40,167 | INFO     | [job] control thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,418 | INFO     | [job] job monitor thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,681 | INFO     | [payload] validate_post thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,686 | INFO     | [data] control thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,704 | INFO     | [job] validate thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,793 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,832 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:40,942 | INFO     | [payload] control thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:41,273 | INFO     | [payload] failed_post thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:41,534 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:41,851 | INFO     | [data] copytool_out thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:44,159 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 13:40:10] 2025-07-25 11:39:46,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178429044544)>', '<ExcThread(monitor, started 140177649424128)>']
[2025-07-25 13:40:10] 2025-07-25 11:39:51,258 | INFO     | all workflow threads have been joined
[2025-07-25 13:40:10] 2025-07-25 11:39:51,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 13:40:10] 2025-07-25 11:39:51,258 | INFO     | traces error code: 0
[2025-07-25 13:40:10] 2025-07-25 11:39:51,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 13:40:10] 2025-07-25 11:40:09,895 | INFO     | PID=2064211 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 13:40:10] 2025-07-25 11:40:09,895 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 13:40:10] 2025-07-25 11:40:09,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 13:40:10] 2025-07-25 11:40:09,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 13:40:10] 2025-07-25 11:40:09,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 13:40:10] 2025-07-25 11:40:09,895 | INFO     | [monitor] control thread has ended
[2025-07-25 13:40:10] 2025-07-25 11:40:09,949 [wrapper] ==== pilot stdout END ====
[2025-07-25 13:40:10] 2025-07-25 11:40:09,951 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 13:40:10] 2025-07-25 11:40:09,953 [wrapper] pilotpid: 2064211
[2025-07-25 13:40:10] 2025-07-25 11:40:09,956 [wrapper] Pilot exit status: 0
[2025-07-25 13:40:10] 2025-07-25 11:40:09,963 [wrapper] pandaids: 6744930533
[2025-07-25 13:40:10] 2025-07-25 11:40:09,979 [wrapper] cleanup supervisor_pilot 2082897 2064212
[2025-07-25 13:40:10] 2025-07-25 11:40:09,981 [wrapper] Test setup, not cleaning
[2025-07-25 13:40:10] 2025-07-25 11:40:09,983 [wrapper] apfmon messages muted
[2025-07-25 13:40:10] 2025-07-25 11:40:09,985 [wrapper] ==== wrapper stdout END ====
[2025-07-25 13:40:10] 2025-07-25 11:40:09,987 [wrapper] ==== wrapper stderr END ====
[2025-07-25 13:40:10]  *** Error codes and diagnostics ***
[2025-07-25 13:40:10]     "exeErrorCode": 0,
[2025-07-25 13:40:10]     "exeErrorDiag": "",
[2025-07-25 13:40:10]     "pilotErrorCode": 0,
[2025-07-25 13:40:10]     "pilotErrorDiag": "",
[2025-07-25 13:40:10]  *** Listing of results directory ***
[2025-07-25 13:40:10] total 351440
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc    530466 Jul 24 22:26 pilot3.tar.gz
[2025-07-25 13:40:10] -rwx------ 1 boinc boinc     36292 Jul 24 22:38 runpilot2-wrapper.sh
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc      5112 Jul 24 22:38 queuedata.json
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc       100 Jul 25 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 13:40:10] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 12:06 run_atlas
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc       105 Jul 25 12:06 job.xml
[2025-07-25 13:40:10] -rw-r--r-- 2 boinc boinc 143567136 Jul 25 12:06 EVNT.45743347._000501.pool.root.1
[2025-07-25 13:40:10] -rw-r--r-- 2 boinc boinc    542877 Jul 25 12:06 input.tar.gz
[2025-07-25 13:40:10] -rw-r--r-- 2 boinc boinc     15095 Jul 25 12:06 start_atlas.sh
[2025-07-25 13:40:10] drwxrwx--x 2 boinc boinc      4096 Jul 25 12:06 shared
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc         0 Jul 25 12:06 boinc_setup_complete
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc      6442 Jul 25 12:06 init_data.xml
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc         0 Jul 25 12:06 boinc_lockfile
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc      2560 Jul 25 12:06 pandaJob.out
[2025-07-25 13:40:10] -rw------- 1 boinc boinc    979709 Jul 25 12:06 agis_schedconf.cvmfs.json
[2025-07-25 13:40:10] -rw------- 1 boinc boinc   1593052 Jul 25 12:06 agis_ddmendpoints.agis.ALL.json
[2025-07-25 13:40:10] drwx------ 4 boinc boinc      4096 Jul 25 12:06 pilot3
[2025-07-25 13:40:10] -rw------- 1 boinc boinc 210894509 Jul 25 13:39 HITS.45743349._009292.pool.root.1
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc       529 Jul 25 13:39 boinc_task_state.xml
[2025-07-25 13:40:10] -rw------- 1 boinc boinc      1021 Jul 25 13:39 memory_monitor_summary.json
[2025-07-25 13:40:10] -rw------- 1 boinc boinc    228007 Jul 25 13:39 log.45743349._009292.job.log.tgz.1
[2025-07-25 13:40:10] -rw------- 1 boinc boinc      7754 Jul 25 13:39 heartbeat.json
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc      8192 Jul 25 13:39 boinc_mmap_file
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc        27 Jul 25 13:39 wrapper_checkpoint.txt
[2025-07-25 13:40:10] -rw------- 1 boinc boinc        95 Jul 25 13:40 pilot_heartbeat.json
[2025-07-25 13:40:10] -rw------- 1 boinc boinc       747 Jul 25 13:40 pilotlog.txt
[2025-07-25 13:40:10] -rw------- 1 boinc boinc    538393 Jul 25 13:40 log.45743349._009292.job.log.1
[2025-07-25 13:40:10] -rw------- 1 boinc boinc       357 Jul 25 13:40 output.list
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc       620 Jul 25 13:40 runtime_log
[2025-07-25 13:40:10] -rw------- 1 boinc boinc    788480 Jul 25 13:40 result.tar.gz
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc      8739 Jul 25 13:40 runtime_log.err
[2025-07-25 13:40:10] -rw------- 1 boinc boinc       660 Jul 25 13:40 37sMDmxsHz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYkxKDmYfqjbn.diag
[2025-07-25 13:40:10] -rw-r--r-- 1 boinc boinc     21502 Jul 25 13:40 stderr.txt
[2025-07-25 13:40:10] HITS file was successfully produced:
[2025-07-25 13:40:10] -rw------- 1 boinc boinc 210894509 Jul 25 13:39 shared/HITS.pool.root.1
[2025-07-25 13:40:10]  *** Contents of shared directory: ***
[2025-07-25 13:40:10] total 347484
[2025-07-25 13:40:10] -rw-r--r-- 2 boinc boinc 143567136 Jul 25 12:06 ATLAS.root_0
[2025-07-25 13:40:10] -rw-r--r-- 2 boinc boinc    542877 Jul 25 12:06 input.tar.gz
[2025-07-25 13:40:10] -rw-r--r-- 2 boinc boinc     15095 Jul 25 12:06 start_atlas.sh
[2025-07-25 13:40:10] -rw------- 1 boinc boinc 210894509 Jul 25 13:39 HITS.pool.root.1
[2025-07-25 13:40:10] -rw------- 1 boinc boinc    788480 Jul 25 13:40 result.tar.gz
13:40:11 (2060576): run_atlas exited; CPU time 15962.338553
13:40:11 (2060576): called boinc_finish(0)

</stderr_txt>
]]>

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