Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:25:13 (28567): wrapper (7.7.26015): starting
20:25:13 (28567): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 20:25:13] Arguments: --nthreads 12
[2025-07-24 20:25:13] Threads: 12
[2025-07-24 20:25:13] Checking for CVMFS
[2025-07-24 20:25:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 20:25:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 20:25:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 20:25:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 20:25:14] 2.11.2.0 2998 108352 100876 148720 2 56 13667135 20275200 1 130560 0 35064615 99.969 9592213 10901 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 20:25:14] CVMFS is ok
[2025-07-24 20:25:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 20:25:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 20:25:14] Further information can be found at the LHC@home message board.
[2025-07-24 20:25:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 20:25:14] Checking for apptainer binary...
[2025-07-24 20:25:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 20:25:14] Running /usr/bin/apptainer --version
[2025-07-24 20:25:14] apptainer version 1.3.2-1.el7
[2025-07-24 20:25:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 20:25:15] c-205-25.aglt2.org
[2025-07-24 20:25:15] apptainer works
[2025-07-24 20:25:15] Set ATHENA_PROC_NUMBER=12
[2025-07-24 20:25:15] Set ATHENA_CORE_NUMBER=12
[2025-07-24 20:25:15] Starting ATLAS job with PandaID=6744917477
[2025-07-24 20:25:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 21:51:25]  *** The last 200 lines of the pilot log: ***
[2025-07-24 21:51:25]  mtime=0
[2025-07-24 21:51:25]  protocol_id=None
[2025-07-24 21:51:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 21:51:25]  replicas=None
[2025-07-24 21:51:25]  scope=mc23_13p6TeV
[2025-07-24 21:51:25]  status=None
[2025-07-24 21:51:25]  status_code=0
[2025-07-24 21:51:25]  storage_token=
[2025-07-24 21:51:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744917477/log.45743349._005519.job.log.tgz.1
[2025-07-24 21:51:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/ae/log.45743349._005519.job.log.tgz.1
[2025-07-24 21:51:25]  workdir=None
[2025-07-24 21:51:25] ]
[2025-07-24 21:51:25] 2025-07-25 01:50:46,320 | INFO     | transferring file log.45743349._005519.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744917477/log.45743349._005519.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-24 21:51:25] 2025-07-25 01:50:46,320 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744917477/log.45743349._005519.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._005519.job
[2025-07-24 21:51:25] 2025-07-25 01:50:46,343 | INFO     | adding to output.list: log.45743349._005519.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/ae/log.45743349._005519.job.log.tg
[2025-07-24 21:51:25] 2025-07-25 01:50:46,344 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 21:51:25] 2025-07-25 01:50:46,344 | INFO     | summary of transferred files:
[2025-07-24 21:51:25] 2025-07-25 01:50:46,344 | INFO     |  -- lfn=log.45743349._005519.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 21:51:25] 2025-07-25 01:50:46,345 | INFO     | stage-out finished correctly
[2025-07-24 21:51:25] 2025-07-25 01:50:48,507 | INFO     | monitor loop #383: job 0:6744917477 is in state 'finished'
[2025-07-24 21:51:25] 2025-07-25 01:50:48,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 21:51:25] 2025-07-25 01:50:49,044 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 21:51:25] 2025-07-25 01:50:49,138 | INFO     | job 6744917477 has state=finished
[2025-07-24 21:51:25] 2025-07-25 01:50:49,138 | INFO     | preparing for final server update for job 6744917477 in state='finished'
[2025-07-24 21:51:25] 2025-07-25 01:50:49,140 | INFO     | this job has now completed (state=finished)
[2025-07-24 21:51:25] 2025-07-25 01:50:49,140 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 21:51:25] 2025-07-25 01:50:49,140 | INFO     | log transfer has been attempted: DONE
[2025-07-24 21:51:25] 2025-07-25 01:50:49,140 | INFO     | job 6744917477 has finished - writing final server update
[2025-07-24 21:51:25] 2025-07-25 01:50:49,141 | INFO     | total number of processed events: 400 (read)
[2025-07-24 21:51:25] 2025-07-25 01:50:49,142 | INFO     | executing command: lscpu
[2025-07-24 21:51:25] 2025-07-25 01:50:49,169 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 21:51:25] 2025-07-25 01:50:51,012 | INFO     | monitor loop #384: job 0:6744917477 is in state 'finished'
[2025-07-24 21:51:25] 2025-07-25 01:50:51,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 21:51:25] 2025-07-25 01:50:53,515 | INFO     | monitor loop #385: job 0:6744917477 is in state 'finished'
[2025-07-24 21:51:25] 2025-07-25 01:50:53,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 21:51:25] 2025-07-25 01:50:54,043 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-24 21:51:25] 2025-07-25 01:50:54,047 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.25
[2025-07-24 21:51:25] 2025-07-25 01:50:54,049 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744917477/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 21:51:25] 2025-07-25 01:50:54,050 | INFO     | extracted standard info from prmon json
[2025-07-24 21:51:25] 2025-07-25 01:50:54,050 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 21:51:25] 2025-07-25 01:50:54,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 21:51:25] 2025-07-25 01:50:54,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 21:51:25] 2025-07-25 01:50:54,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 21:51:25] 2025-07-25 01:50:54,053 | INFO     | fitting pss+swap vs Time
[2025-07-24 21:51:25] 2025-07-25 01:50:54,053 | INFO     | sum of square deviations: 141539398.0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,054 | INFO     | sum of deviations: -9805002872.0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,054 | INFO     | mean x: 1753405782.0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,054 | INFO     | mean y: 2845166.324675325
[2025-07-24 21:51:25] 2025-07-25 01:50:54,054 | INFO     | -- intersect: 121468309702.85892
[2025-07-24 21:51:25] 2025-07-25 01:50:54,054 | INFO     | intersect: 121468309702.85892
[2025-07-24 21:51:25] 2025-07-25 01:50:54,055 | INFO     | chi2: 0.1069877433437326
[2025-07-24 21:51:25] 2025-07-25 01:50:54,055 | INFO     | -- intersect: 121468309702.85892
[2025-07-24 21:51:25] 2025-07-25 01:50:54,055 | INFO     | current memory leak: -69.27 B/s (using 77 data points, chi2=0.11)
[2025-07-24 21:51:25] 2025-07-25 01:50:54,055 | INFO     | could have reported an average CPU frequency of 2072 MHz (6 samples)
[2025-07-24 21:51:25] 2025-07-25 01:50:54,055 | INFO     | ..............................
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . Timing measurements:
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . get job = 0 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . initial setup = 2 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . payload setup = 9 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . stage-in = 0 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . payload execution = 5086 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . stage-out = 0 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | . log creation = 0 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,056 | INFO     | ..............................
[2025-07-24 21:51:25] 2025-07-25 01:50:54,139 | INFO     | 
[2025-07-24 21:51:25] 2025-07-25 01:50:54,139 | INFO     | job summary report
[2025-07-24 21:51:25] 2025-07-25 01:50:54,139 | INFO     | --------------------------------------------------
[2025-07-24 21:51:25] 2025-07-25 01:50:54,140 | INFO     | PanDA job id: 6744917477
[2025-07-24 21:51:25] 2025-07-25 01:50:54,140 | INFO     | task id: 45743349
[2025-07-24 21:51:25] 2025-07-25 01:50:54,140 | INFO     | errors: (none)
[2025-07-24 21:51:25] 2025-07-25 01:50:54,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 21:51:25] 2025-07-25 01:50:54,140 | INFO     | pilot state: finished 
[2025-07-24 21:51:25] 2025-07-25 01:50:54,140 | INFO     | transexitcode: 0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,141 | INFO     | exeerrorcode: 0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,141 | INFO     | exeerrordiag: 
[2025-07-24 21:51:25] 2025-07-25 01:50:54,141 | INFO     | exitcode: 0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,141 | INFO     | exitmsg: OK
[2025-07-24 21:51:25] 2025-07-25 01:50:54,141 | INFO     | cpuconsumptiontime: 55208 s
[2025-07-24 21:51:25] 2025-07-25 01:50:54,141 | INFO     | nevents: 400
[2025-07-24 21:51:25] 2025-07-25 01:50:54,142 | INFO     | neventsw: 0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,142 | INFO     | pid: 6361
[2025-07-24 21:51:25] 2025-07-25 01:50:54,142 | INFO     | pgrp: 6361
[2025-07-24 21:51:25] 2025-07-25 01:50:54,142 | INFO     | corecount: 12
[2025-07-24 21:51:25] 2025-07-25 01:50:54,142 | INFO     | event service: False
[2025-07-24 21:51:25] 2025-07-25 01:50:54,142 | INFO     | sizes: {0: 2397470, 5: 2397732, 11: 2397788, 5100: 2424091, 5101: 2424090, 5103: 2433144, 5105: 2433328, 5110: 2433522}
[2025-07-24 21:51:25] 2025-07-25 01:50:54,143 | INFO     | --------------------------------------------------
[2025-07-24 21:51:25] 2025-07-25 01:50:54,143 | INFO     | 
[2025-07-24 21:51:25] 2025-07-25 01:50:54,143 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 21:51:25] 2025-07-25 01:50:54,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,168 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,170 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 21:51:25] 2025-07-25 01:50:54,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,171 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 21:51:25] 2025-07-25 01:50:54,171 | INFO     | job 6744917477 has completed (purged errors)
[2025-07-24 21:51:25] 2025-07-25 01:50:54,171 | INFO     | overall cleanup function is called
[2025-07-24 21:51:25] 2025-07-25 01:50:55,175 | INFO     | --- collectZombieJob: --- 10, [6361]
[2025-07-24 21:51:25] 2025-07-25 01:50:55,175 | INFO     | zombie collector waiting for pid 6361
[2025-07-24 21:51:25] 2025-07-25 01:50:55,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 21:51:25] 2025-07-25 01:50:55,175 | INFO     | collected zombie processes
[2025-07-24 21:51:25] 2025-07-25 01:50:55,175 | INFO     | will attempt to kill all subprocesses of pid=6361
[2025-07-24 21:51:25] 2025-07-25 01:50:55,270 | INFO     | process IDs to be killed: [6361] (in reverse order)
[2025-07-24 21:51:25] 2025-07-25 01:50:55,320 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 21:51:25] 2025-07-25 01:50:55,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 21:51:25] 2025-07-25 01:50:55,324 | INFO     | did not find any defunct processes belonging to 6361
[2025-07-24 21:51:25] 2025-07-25 01:50:55,327 | INFO     | did not find any defunct processes belonging to 6361
[2025-07-24 21:51:25] 2025-07-25 01:50:55,327 | INFO     | ready for new job
[2025-07-24 21:51:25] 2025-07-25 01:50:55,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 21:51:25] 2025-07-25 01:50:55,329 | INFO     | ***************************************
[2025-07-24 21:51:25] 2025-07-25 01:50:55,330 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 21:51:25] 2025-07-25 01:50:55,330 | INFO     | ***************************************
[2025-07-24 21:51:25] 2025-07-25 01:50:55,330 | INFO     | 
[2025-07-24 21:51:25] 2025-07-25 01:50:55,331 | INFO     | architecture information:
[2025-07-24 21:51:25] 2025-07-25 01:50:55,331 | INFO     | executing command: cat /etc/os-release
[2025-07-24 21:51:25] 2025-07-25 01:50:55,347 | INFO     | cat /etc/os-release:
[2025-07-24 21:51:25] NAME="CentOS Linux"
[2025-07-24 21:51:25] VERSION="7 (Core)"
[2025-07-24 21:51:25] ID="centos"
[2025-07-24 21:51:25] ID_LIKE="rhel fedora"
[2025-07-24 21:51:25] VERSION_ID="7"
[2025-07-24 21:51:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 21:51:25] ANSI_COLOR="0;31"
[2025-07-24 21:51:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 21:51:25] HOME_URL="https://www.centos.org/"
[2025-07-24 21:51:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 21:51:25] 
[2025-07-24 21:51:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 21:51:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 21:51:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 21:51:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 21:51:25] 
[2025-07-24 21:51:25] 2025-07-25 01:50:55,347 | INFO     | ***************************************
[2025-07-24 21:51:25] 2025-07-25 01:50:55,850 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 21:51:25] 2025-07-25 01:50:55,866 | INFO     | sufficient remaining disk space (29347545088 B)
[2025-07-24 21:51:25] 2025-07-25 01:50:55,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 21:51:25] 2025-07-25 01:50:55,867 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 21:51:25] 2025-07-25 01:50:55,867 | INFO     | update_server=False
[2025-07-24 21:51:25] 2025-07-25 01:50:55,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 21:51:25] 2025-07-25 01:50:55,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 21:51:25] 2025-07-25 01:50:55,868 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:51:25] 2025-07-25 01:50:56,018 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-24 21:51:25] 2025-07-25 01:50:56,018 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-24 21:51:25] 2025-07-25 01:50:56,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:51:25] 2025-07-25 01:50:56,018 | INFO     | will abort loop
[2025-07-24 21:51:25] 2025-07-25 01:50:56,401 | INFO     | all data control threads have been joined
[2025-07-24 21:51:25] 2025-07-25 01:50:56,870 | INFO     | [job] queue monitor thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:56,872 | INFO     | [job] retrieve thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:56,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 21:51:25] 2025-07-25 01:50:56,965 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:56,989 | INFO     | [data] copytool_in thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:57,024 | INFO     | [job] job monitor thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:57,169 | INFO     | all job control threads have been joined
[2025-07-24 21:51:25] 2025-07-25 01:50:57,316 | INFO     | all payload control threads have been joined
[2025-07-24 21:51:25] 2025-07-25 01:50:57,404 | INFO     | [data] control thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:57,524 | INFO     | [job] validate thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:57,798 | INFO     | [payload] failed_post thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:57,899 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:58,175 | INFO     | [job] control thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:58,254 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:58,321 | INFO     | [payload] control thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:58,375 | INFO     | [payload] validate_post thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:58,948 | INFO     | [data] copytool_out thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:50:59,874 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:51:06,750 | INFO     | job.realtimelogging is not enabled
[2025-07-24 21:51:25] 2025-07-25 01:51:07,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 21:51:25] 2025-07-25 01:51:08,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152866555712)>', '<ExcThread(monitor, started 140152148055808)>']
[2025-07-24 21:51:25] 2025-07-25 01:51:13,225 | INFO     | all workflow threads have been joined
[2025-07-24 21:51:25] 2025-07-25 01:51:13,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 21:51:25] 2025-07-25 01:51:13,233 | INFO     | traces error code: 0
[2025-07-24 21:51:25] 2025-07-25 01:51:13,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 21:51:25] 2025-07-25 01:51:25,519 | INFO     | PID=32160 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 21:51:25] 2025-07-25 01:51:25,519 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 21:51:25] 2025-07-25 01:51:25,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 21:51:25] 2025-07-25 01:51:25,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 21:51:25] 2025-07-25 01:51:25,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 21:51:25] 2025-07-25 01:51:25,520 | INFO     | [monitor] control thread has ended
[2025-07-24 21:51:25] 2025-07-25 01:51:25,618 [wrapper] ==== pilot stdout END ====
[2025-07-24 21:51:25] 2025-07-25 01:51:25,622 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 21:51:25] 2025-07-25 01:51:25,626 [wrapper] pilotpid: 32160
[2025-07-24 21:51:25] 2025-07-25 01:51:25,629 [wrapper] Pilot exit status: 0
[2025-07-24 21:51:25] 2025-07-25 01:51:25,644 [wrapper] pandaids: 6744917477
[2025-07-24 21:51:25] 2025-07-25 01:51:25,688 [wrapper] cleanup supervisor_pilot 25334 32161
[2025-07-24 21:51:25] 2025-07-25 01:51:25,692 [wrapper] Test setup, not cleaning
[2025-07-24 21:51:25] 2025-07-25 01:51:25,695 [wrapper] apfmon messages muted
[2025-07-24 21:51:25] 2025-07-25 01:51:25,699 [wrapper] ==== wrapper stdout END ====
[2025-07-24 21:51:25] 2025-07-25 01:51:25,703 [wrapper] ==== wrapper stderr END ====
[2025-07-24 21:51:25]  *** Error codes and diagnostics ***
[2025-07-24 21:51:25]     "exeErrorCode": 0,
[2025-07-24 21:51:25]     "exeErrorDiag": "",
[2025-07-24 21:51:25]     "pilotErrorCode": 0,
[2025-07-24 21:51:25]     "pilotErrorDiag": "",
[2025-07-24 21:51:25]  *** Listing of results directory ***
[2025-07-24 21:51:25] total 436776
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas    550332 Jun 18 11:33 pilot3.tar.gz
[2025-07-24 21:51:25] -rwx------ 1 boincer umatlas     36292 Jul 24 14:25 runpilot2-wrapper.sh
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas      5112 Jul 24 14:26 queuedata.json
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas       100 Jul 24 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 21:51:25] -rwxr-xr-x 1 boincer umatlas      7986 Jul 24 20:25 run_atlas
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas       105 Jul 24 20:25 job.xml
[2025-07-24 21:51:25] -rw-r--r-- 2 boincer umatlas 230592121 Jul 24 20:25 EVNT.45743347._000292.pool.root.1
[2025-07-24 21:51:25] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 20:25 start_atlas.sh
[2025-07-24 21:51:25] drwxrwx--x 2 boincer umatlas      4096 Jul 24 20:25 shared
[2025-07-24 21:51:25] -rw-r--r-- 2 boincer umatlas    564549 Jul 24 20:25 input.tar.gz
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas         0 Jul 24 20:25 boinc_lockfile
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas      2561 Jul 24 20:25 pandaJob.out
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas    979709 Jul 24 20:25 agis_schedconf.cvmfs.json
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas   1593052 Jul 24 20:25 agis_ddmendpoints.agis.ALL.json
[2025-07-24 21:51:25] drwx------ 6 boincer umatlas      4096 Jul 24 20:25 pilot3
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas      5868 Jul 24 21:46 init_data.xml
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas 211048865 Jul 24 21:50 HITS.45743349._005519.pool.root.1
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas       529 Jul 24 21:50 boinc_task_state.xml
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas        95 Jul 24 21:50 pilot_heartbeat.json
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas      1050 Jul 24 21:50 memory_monitor_summary.json
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas    365985 Jul 24 21:50 log.45743349._005519.job.log.tgz.1
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas      7851 Jul 24 21:50 heartbeat.json
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas      8192 Jul 24 21:51 boinc_mmap_file
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas        27 Jul 24 21:51 wrapper_checkpoint.txt
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas       745 Jul 24 21:51 pilotlog.txt
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas    488580 Jul 24 21:51 log.45743349._005519.job.log.1
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas       357 Jul 24 21:51 output.list
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas       620 Jul 24 21:51 runtime_log
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas    870400 Jul 24 21:51 result.tar.gz
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas       659 Jul 24 21:51 VbQNDm5nFz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6MxKDmfzFXsm.diag
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas      8662 Jul 24 21:51 runtime_log.err
[2025-07-24 21:51:25] -rw-r--r-- 1 boincer umatlas     21689 Jul 24 21:51 stderr.txt
[2025-07-24 21:51:25] HITS file was successfully produced:
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas 211048865 Jul 24 21:50 shared/HITS.pool.root.1
[2025-07-24 21:51:25]  *** Contents of shared directory: ***
[2025-07-24 21:51:25] total 432712
[2025-07-24 21:51:25] -rw-r--r-- 2 boincer umatlas 230592121 Jul 24 20:25 ATLAS.root_0
[2025-07-24 21:51:25] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 20:25 start_atlas.sh
[2025-07-24 21:51:25] -rw-r--r-- 2 boincer umatlas    564549 Jul 24 20:25 input.tar.gz
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas 211048865 Jul 24 21:50 HITS.pool.root.1
[2025-07-24 21:51:25] -rw------- 1 boincer umatlas    870400 Jul 24 21:51 result.tar.gz
21:51:27 (28567): run_atlas exited; CPU time 55169.081981
21:51:27 (28567): called boinc_finish(0)

</stderr_txt>
]]>

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