Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:15:06 (2749897): wrapper (7.7.26015): starting
17:15:06 (2749897): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 17:15:06] Arguments: --nthreads 12
[2025-07-24 17:15:06] Threads: 12
[2025-07-24 17:15:06] Checking for CVMFS
[2025-07-24 17:15:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 17:15:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 17:15:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 17:15:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 17:15:07] 2.11.5.0 6647 33528 238136 148720 2 24 39340667 45568000 15309 130560 0 252287545 99.746 189426030 27877 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-24 17:15:07] CVMFS is ok
[2025-07-24 17:15:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 17:15:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 17:15:07] Further information can be found at the LHC@home message board.
[2025-07-24 17:15:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 17:15:07] Checking for apptainer binary...
[2025-07-24 17:15:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 17:15:07] Running /usr/bin/apptainer --version
[2025-07-24 17:15:07] apptainer version 1.4.1-1.el9
[2025-07-24 17:15:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 17:15:08] wns0055.triumf.lcg
[2025-07-24 17:15:08] apptainer works
[2025-07-24 17:15:08] Set ATHENA_PROC_NUMBER=12
[2025-07-24 17:15:08] Set ATHENA_CORE_NUMBER=12
[2025-07-24 17:15:08] Starting ATLAS job with PandaID=6744935473
[2025-07-24 17:15:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 17:18:54]  *** The last 200 lines of the pilot log: ***
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | WARNING  | found no stored workdir sizes
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | WARNING  | wrong length of table data, x=[1753402555.0], y=[1730.0] (must be same and length>=4)
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | INFO     | could have reported an average CPU frequency of 2404 MHz (4 samples)
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | INFO     | ..............................
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . Timing measurements:
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . get job = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . initial setup = 3 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . payload setup = 7 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . stage-in = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . payload execution = 27 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . stage-out = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . log creation = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | ..............................
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744935473/pilotlog.txt
[2025-07-24 17:18:54] 2025-07-25 00:18:21,895 | INFO     | PID=2753464 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 17:18:54] 2025-07-25 00:18:21,895 | INFO     | .. there are 21 such processes running
[2025-07-24 17:18:54] 2025-07-25 00:18:21,902 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 17:18:54] - Log from pilotlog.txt -
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | WARNING  | found no stored workdir sizes
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | WARNING  | wrong length of table data, x=[1753402555.0], y=[1730.0] (must be same and length>=4)
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | INFO     | could have reported an average CPU frequency of 2404 MHz (4 samples)
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | INFO     | ..............................
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . Timing measurements:
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . get job = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . initial setup = 3 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . payload setup = 7 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . stage-in = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . payload execution = 27 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . stage-out = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . log creation = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | ..............................
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744935473/pilotlog.txt
[2025-07-24 17:18:54] 2025-07-25 00:18:21,895 | INFO     | PID=2753464 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 17:18:54] 2025-07-25 00:18:21,895 | INFO     | .. there are 21 such processes running
[2025-07-24 17:18:54] 2025-07-25 00:18:21,902 | WARNING  | 
[2025-07-24 17:18:54] [begin log extracts]
[2025-07-24 17:18:54] - Log from pilotlog.txt -
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | WARNING  | found no stored workdir sizes
[2025-07-24 17:18:54] 2025-07-25 00:18:21,809 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | WARNING  | wrong length of table data, x=[1753402555.0], y=[1730.0] (must be same and length>=4)
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | INFO     | could have reported an average CPU frequency of 2404 MHz (4 samples)
[2025-07-24 17:18:54] 2025-07-25 00:18:21,810 | INFO     | ..............................
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . Timing measurements:
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . get job = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . initial setup = 3 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . payload setup = 7 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . stage-in = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . payload execution = 27 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . stage-out = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | . log creation = 0 s
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | ..............................
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 17:18:54] 2025-07-25 00:18:21,811 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744935473/pilotlog.txt
[2025-07-24 17:18:54] 2025-07-25 00:18:21,895 | INFO     | PID=2753464 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 17:18:54] 2025-07-25 00:18:21,895 | INFO     | .. there are 21 such processes running
[2025-07-24 17:18:54] [end log extracts]
[2025-07-24 17:18:54] 2025-07-25 00:18:21,902 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 17:18:54] 2025-07-25 00:18:21,903 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | 
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | job summary report
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | --------------------------------------------------
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | PanDA job id: 6744935473
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | task id: 45743349
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 17:16:09,452 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | pilot state: failed 
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | transexitcode: 65
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | exeerrorcode: 65
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | exitcode: 65
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | cpuconsumptiontime: 16 s
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | nevents: 0
[2025-07-24 17:18:54] 2025-07-25 00:18:22,148 | INFO     | neventsw: 0
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | pid: 2759765
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | pgrp: 2759765
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | corecount: 12
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | event service: False
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | sizes: {0: 2397298, 1: 2397497, 8: 2397759, 11: 2397787, 37: 2420963, 38: 2420939, 39: 2425387, 40: 2425415, 162: 2425581}
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | --------------------------------------------------
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | 
[2025-07-24 17:18:54] 2025-07-25 00:18:22,149 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 17:18:54] 2025-07-25 00:18:22,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,164 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,164 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | job 6744935473 has completed (purged errors)
[2025-07-24 17:18:54] 2025-07-25 00:18:22,165 | INFO     | overall cleanup function is called
[2025-07-24 17:18:54] 2025-07-25 00:18:23,173 | INFO     | --- collectZombieJob: --- 10, [2759765]
[2025-07-24 17:18:54] 2025-07-25 00:18:23,173 | INFO     | zombie collector waiting for pid 2759765
[2025-07-24 17:18:54] 2025-07-25 00:18:23,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 17:18:54] 2025-07-25 00:18:23,173 | INFO     | collected zombie processes
[2025-07-24 17:18:54] 2025-07-25 00:18:23,173 | INFO     | will attempt to kill all subprocesses of pid=2759765
[2025-07-24 17:18:54] 2025-07-25 00:18:23,455 | INFO     | process IDs to be killed: [2759765] (in reverse order)
[2025-07-24 17:18:54] 2025-07-25 00:18:23,521 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 17:18:54] 2025-07-25 00:18:23,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 17:18:54] 2025-07-25 00:18:23,529 | INFO     | did not find any defunct processes belonging to 2759765
[2025-07-24 17:18:54] 2025-07-25 00:18:23,536 | INFO     | did not find any defunct processes belonging to 2759765
[2025-07-24 17:18:54] 2025-07-25 00:18:23,537 | INFO     | ready for new job
[2025-07-24 17:18:54] 2025-07-25 00:18:23,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 17:18:54] 2025-07-25 00:18:23,538 | INFO     | ***************************************
[2025-07-24 17:18:54] 2025-07-25 00:18:23,538 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 17:18:54] 2025-07-25 00:18:23,538 | INFO     | ***************************************
[2025-07-24 17:18:54] 2025-07-25 00:18:23,538 | INFO     | 
[2025-07-24 17:18:54] 2025-07-25 00:18:23,540 | INFO     | architecture information:
[2025-07-24 17:18:54] 2025-07-25 00:18:23,540 | INFO     | executing command: cat /etc/os-release
[2025-07-24 17:18:54] 2025-07-25 00:18:23,554 | INFO     | cat /etc/os-release:
[2025-07-24 17:18:54] NAME="CentOS Linux"
[2025-07-24 17:18:54] VERSION="7 (Core)"
[2025-07-24 17:18:54] ID="centos"
[2025-07-24 17:18:54] ID_LIKE="rhel fedora"
[2025-07-24 17:18:54] VERSION_ID="7"
[2025-07-24 17:18:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 17:18:54] ANSI_COLOR="0;31"
[2025-07-24 17:18:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 17:18:54] HOME_URL="https://www.centos.org/"
[2025-07-24 17:18:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 17:18:54] 
[2025-07-24 17:18:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 17:18:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 17:18:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 17:18:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 17:18:54] 
[2025-07-24 17:18:54] 2025-07-25 00:18:23,554 | INFO     | ***************************************
[2025-07-24 17:18:54] 2025-07-25 00:18:24,058 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 17:18:54] 2025-07-25 00:18:24,086 | INFO     | sufficient remaining disk space (2077477568512 B)
[2025-07-24 17:18:54] 2025-07-25 00:18:24,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 17:18:54] 2025-07-25 00:18:24,086 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 17:18:54] 2025-07-25 00:18:24,087 | INFO     | update_server=False
[2025-07-24 17:18:54] 2025-07-25 00:18:24,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 17:18:54] 2025-07-25 00:18:24,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 17:18:54] 2025-07-25 00:18:24,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 17:18:54] 2025-07-25 00:18:24,092 | INFO     | aborting loop
[2025-07-24 17:18:54] 2025-07-25 00:18:24,205 | INFO     | all data control threads have been joined
[2025-07-24 17:18:54] 2025-07-25 00:18:25,093 | INFO     | [job] retrieve thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:25,095 | INFO     | [job] queue monitor thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:25,099 | INFO     | [job] job monitor thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:25,211 | INFO     | [data] control thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:25,292 | INFO     | [payload] validate_post thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:25,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:25,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 17:18:54] 2025-07-25 00:18:25,343 | INFO     | [job] validate thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:25,429 | INFO     | all job control threads have been joined
[2025-07-24 17:18:54] 2025-07-25 00:18:25,515 | INFO     | all payload control threads have been joined
[2025-07-24 17:18:54] 2025-07-25 00:18:25,803 | INFO     | [payload] failed_post thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:26,078 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:26,375 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:26,375 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:26,435 | INFO     | [job] control thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:26,522 | INFO     | [payload] control thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:26,531 | INFO     | [data] copytool_in thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:27,339 | INFO     | [data] copytool_out thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:27,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 17:18:54] 2025-07-25 00:18:31,369 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 17:18:54] 2025-07-25 00:18:31,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378675451712)>', '<ExcThread(monitor, started 140377910667008)>']
[2025-07-24 17:18:54] 2025-07-25 00:18:36,881 | INFO     | all workflow threads have been joined
[2025-07-24 17:18:54] 2025-07-25 00:18:36,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 17:18:54] 2025-07-25 00:18:36,881 | INFO     | traces error code: 0
[2025-07-24 17:18:54] 2025-07-25 00:18:36,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 17:18:54] 2025-07-25 00:18:54,207 | INFO     | PID=2753464 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 17:18:54] 2025-07-25 00:18:54,208 | INFO     | .. there are 21 such processes running
[2025-07-24 17:18:54] 2025-07-25 00:18:54,208 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 17:18:54] 2025-07-25 00:18:54,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 17:18:54] 2025-07-25 00:18:54,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 17:18:54] 2025-07-25 00:18:54,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 17:18:54] 2025-07-25 00:18:54,208 | INFO     | [monitor] control thread has ended
[2025-07-24 17:18:54] 2025-07-25 00:18:54,336 [wrapper] ==== pilot stdout END ====
[2025-07-24 17:18:54] 2025-07-25 00:18:54,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 17:18:54] 2025-07-25 00:18:54,341 [wrapper] pilotpid: 2753464
[2025-07-24 17:18:54] 2025-07-25 00:18:54,343 [wrapper] Pilot exit status: 0
[2025-07-24 17:18:54] 2025-07-25 00:18:54,353 [wrapper] pandaids: 6744935473
[2025-07-24 17:18:54] 2025-07-25 00:18:54,395 [wrapper] cleanup supervisor_pilot 2753470 2753465
[2025-07-24 17:18:54] 2025-07-25 00:18:54,397 [wrapper] Test setup, not cleaning
[2025-07-24 17:18:54] 2025-07-25 00:18:54,400 [wrapper] apfmon messages muted
[2025-07-24 17:18:54] 2025-07-25 00:18:54,402 [wrapper] ==== wrapper stdout END ====
[2025-07-24 17:18:54] 2025-07-25 00:18:54,404 [wrapper] ==== wrapper stderr END ====
[2025-07-24 17:18:54]  *** Error codes and diagnostics ***
[2025-07-24 17:18:54]     "exeErrorCode": 65,
[2025-07-24 17:18:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 17:18:54]     "pilotErrorCode": 1305,
[2025-07-24 17:18:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 17:18:54]  *** Listing of results directory ***
[2025-07-24 17:18:54] total 226720
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc    530466 Jul 24 15:04 pilot3.tar.gz
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc      5112 Jul 24 15:09 queuedata.json
[2025-07-24 17:18:54] -rwx------. 1 boinc boinc     36292 Jul 24 15:09 runpilot2-wrapper.sh
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc       100 Jul 24 17:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 17:18:54] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 17:15 run_atlas
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc       105 Jul 24 17:15 job.xml
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc      6595 Jul 24 17:15 init_data.xml
[2025-07-24 17:18:54] -rw-r--r--. 2 boinc boinc 228115040 Jul 24 17:15 EVNT.45743347._000621.pool.root.1
[2025-07-24 17:18:54] -rw-r--r--. 2 boinc boinc     15095 Jul 24 17:15 start_atlas.sh
[2025-07-24 17:18:54] drwxrwx--x. 2 boinc boinc      4096 Jul 24 17:15 shared
[2025-07-24 17:18:54] -rw-r--r--. 2 boinc boinc    542895 Jul 24 17:15 input.tar.gz
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc         0 Jul 24 17:15 boinc_lockfile
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc      2561 Jul 24 17:15 pandaJob.out
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc    979709 Jul 24 17:15 agis_schedconf.cvmfs.json
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc   1593052 Jul 24 17:15 agis_ddmendpoints.agis.ALL.json
[2025-07-24 17:18:54] drwx------. 4 boinc boinc      4096 Jul 24 17:15 pilot3
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc       522 Jul 24 17:16 boinc_task_state.xml
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc       959 Jul 24 17:16 memory_monitor_summary.json
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc     20399 Jul 24 17:16 log.45743349._011318.job.log.tgz.1
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc      8389 Jul 24 17:18 heartbeat.json
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc      8192 Jul 24 17:18 boinc_mmap_file
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc        22 Jul 24 17:18 wrapper_checkpoint.txt
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc        95 Jul 24 17:18 pilot_heartbeat.json
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc       823 Jul 24 17:18 pilotlog.txt
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc     76545 Jul 24 17:18 log.45743349._011318.job.log.1
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc       188 Jul 24 17:18 output.list
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc       620 Jul 24 17:18 runtime_log
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc    112640 Jul 24 17:18 result.tar.gz
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc      8485 Jul 24 17:18 runtime_log.err
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc       647 Jul 24 17:18 kgTNDm9IJz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjxxKDmgTQ0Vm.diag
[2025-07-24 17:18:54] -rw-r--r--. 1 boinc boinc      2139 Jul 24 17:18 stderr.txt
[2025-07-24 17:18:54] No HITS result produced
[2025-07-24 17:18:54]  *** Contents of shared directory: ***
[2025-07-24 17:18:54] total 223436
[2025-07-24 17:18:54] -rw-r--r--. 2 boinc boinc 228115040 Jul 24 17:15 ATLAS.root_0
[2025-07-24 17:18:54] -rw-r--r--. 2 boinc boinc     15095 Jul 24 17:15 start_atlas.sh
[2025-07-24 17:18:54] -rw-r--r--. 2 boinc boinc    542895 Jul 24 17:15 input.tar.gz
[2025-07-24 17:18:54] -rw-------. 1 boinc boinc    112640 Jul 24 17:18 result.tar.gz
17:18:55 (2749897): run_atlas exited; CPU time 21.533980
17:18:55 (2749897): called boinc_finish(0)

</stderr_txt>
]]>

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