Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:39:16 (547689): wrapper (7.7.26015): starting
19:39:16 (547689): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 19:39:16] Arguments: --nthreads 8
[2025-07-24 19:39:16] Threads: 8
[2025-07-24 19:39:16] Checking for CVMFS
[2025-07-24 19:39:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 19:39:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 19:39:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 19:39:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 19:39:16] 2.13.0.0 3724680 15297 268032 148719 1 557 19402796 32935936 25371 16776704 0 73719220 99.497 114267412 20246 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 19:39:16] CVMFS is ok
[2025-07-24 19:39:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 19:39:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 19:39:16] Further information can be found at the LHC@home message board.
[2025-07-24 19:39:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 19:39:16] Checking for apptainer binary...
[2025-07-24 19:39:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 19:39:16] Running /usr/bin/apptainer --version
[2025-07-24 19:39:17] apptainer version 1.4.1-1.el9
[2025-07-24 19:39:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 19:39:17] c7-4-31.aglt2.org
[2025-07-24 19:39:17] apptainer works
[2025-07-24 19:39:17] Set ATHENA_PROC_NUMBER=8
[2025-07-24 19:39:17] Set ATHENA_CORE_NUMBER=8
[2025-07-24 19:39:17] Starting ATLAS job with PandaID=6744925860
[2025-07-24 19:39:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 22:03:19]  *** The last 200 lines of the pilot log: ***
[2025-07-24 22:03:19] 2025-07-25 02:02:40,207 | INFO     | monitor loop #563: job 0:6744925860 is in state 'finished'
[2025-07-24 22:03:19] 2025-07-25 02:02:40,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 22:03:19] 2025-07-25 02:02:42,737 | INFO     | monitor loop #564: job 0:6744925860 is in state 'finished'
[2025-07-24 22:03:19] 2025-07-25 02:02:42,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,324 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 22:03:19] 2025-07-25 02:02:44,331 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2957.4321875
[2025-07-24 22:03:19] 2025-07-25 02:02:44,351 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6744925860/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,351 | INFO     | extracted standard info from prmon json
[2025-07-24 22:03:19] 2025-07-25 02:02:44,352 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 22:03:19] 2025-07-25 02:02:44,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 22:03:19] 2025-07-25 02:02:44,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 22:03:19] 2025-07-25 02:02:44,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 22:03:19] 2025-07-25 02:02:44,354 | INFO     | fitting pss+swap vs Time
[2025-07-24 22:03:19] 2025-07-25 02:02:44,355 | INFO     | sum of square deviations: 832658794.1294975
[2025-07-24 22:03:19] 2025-07-25 02:02:44,371 | INFO     | sum of deviations: -16922125247.064747
[2025-07-24 22:03:19] 2025-07-25 02:02:44,372 | INFO     | mean x: 1753404675.0791366
[2025-07-24 22:03:19] 2025-07-25 02:02:44,372 | INFO     | mean y: 2213461.4604316545
[2025-07-24 22:03:19] 2025-07-25 02:02:44,372 | INFO     | -- intersect: 35636657881.756134
[2025-07-24 22:03:19] 2025-07-25 02:02:44,372 | INFO     | intersect: 35636657881.756134
[2025-07-24 22:03:19] 2025-07-25 02:02:44,372 | INFO     | chi2: 2.427212392655799
[2025-07-24 22:03:19] 2025-07-25 02:02:44,372 | INFO     | sum of square deviations: 745990756.5970151
[2025-07-24 22:03:19] 2025-07-25 02:02:44,373 | INFO     | sum of deviations: -15297791575.31343
[2025-07-24 22:03:19] 2025-07-25 02:02:44,373 | INFO     | mean x: 1753404522.5820897
[2025-07-24 22:03:19] 2025-07-25 02:02:44,373 | INFO     | mean y: 2216307.119402985
[2025-07-24 22:03:19] 2025-07-25 02:02:44,373 | INFO     | -- intersect: 35958716701.34973
[2025-07-24 22:03:19] 2025-07-25 02:02:44,396 | INFO     | intersect: 35958716701.34973
[2025-07-24 22:03:19] 2025-07-25 02:02:44,396 | INFO     | chi2: 2.425546618865482
[2025-07-24 22:03:19] 2025-07-25 02:02:44,396 | INFO     | current chi2=2.425546618865482 (change=0.06862909053023117 %)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,396 | INFO     | right removable region: 133
[2025-07-24 22:03:19] 2025-07-25 02:02:44,397 | INFO     | sum of square deviations: 745984046.5970151
[2025-07-24 22:03:19] 2025-07-25 02:02:44,397 | INFO     | sum of deviations: -40212291320.83583
[2025-07-24 22:03:19] 2025-07-25 02:02:44,397 | INFO     | mean x: 1753404827.5820897
[2025-07-24 22:03:19] 2025-07-25 02:02:44,398 | INFO     | mean y: 2253888.9850746267
[2025-07-24 22:03:19] 2025-07-25 02:02:44,398 | INFO     | -- intersect: 94519591158.7725
[2025-07-24 22:03:19] 2025-07-25 02:02:44,398 | INFO     | intersect: 94519591158.7725
[2025-07-24 22:03:19] 2025-07-25 02:02:44,398 | INFO     | chi2: 0.3632783878206888
[2025-07-24 22:03:19] 2025-07-25 02:02:44,398 | INFO     | current chi2=0.3632783878206888 (change=85.03310262752912 %)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,398 | INFO     | sum of square deviations: 665550147.2248076
[2025-07-24 22:03:19] 2025-07-25 02:02:44,399 | INFO     | sum of deviations: -36906364541.7752
[2025-07-24 22:03:19] 2025-07-25 02:02:44,399 | INFO     | mean x: 1753404980.0775194
[2025-07-24 22:03:19] 2025-07-25 02:02:44,399 | INFO     | mean y: 2247540.07751938
[2025-07-24 22:03:19] 2025-07-25 02:02:44,399 | INFO     | -- intersect: 97232792306.59659
[2025-07-24 22:03:19] 2025-07-25 02:02:44,399 | INFO     | intersect: 97232792306.59659
[2025-07-24 22:03:19] 2025-07-25 02:02:44,400 | INFO     | chi2: 0.34956319935666497
[2025-07-24 22:03:19] 2025-07-25 02:02:44,408 | INFO     | current chi2=0.34956319935666497 (change=3.775393451369728 %)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,408 | INFO     | left removable region: 20
[2025-07-24 22:03:19] 2025-07-25 02:02:44,408 | INFO     | sum of square deviations: 447341798.56637096
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | sum of deviations: -22873246320.15931
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | mean x: 1753405102.0619469
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | mean y: 2226508.451327434
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | -- intersect: 89656416944.08206
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | intersect: 89656416944.08206
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | chi2: 0.3127647706587285
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | -- intersect: 89656416944.08206
[2025-07-24 22:03:19] 2025-07-25 02:02:44,409 | INFO     | current memory leak: -51.13 B/s (using 113 data points, chi2=0.31)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,410 | INFO     | could have reported an average CPU frequency of 2952 MHz (8 samples)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,410 | INFO     | ..............................
[2025-07-24 22:03:19] 2025-07-25 02:02:44,410 | INFO     | . Timing measurements:
[2025-07-24 22:03:19] 2025-07-25 02:02:44,410 | INFO     | . get job = 0 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,410 | INFO     | . initial setup = 5 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,410 | INFO     | . payload setup = 26 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,410 | INFO     | . stage-in = 0 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,411 | INFO     | . payload execution = 8481 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,411 | INFO     | . stage-out = 1 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,411 | INFO     | . log creation = 0 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,411 | INFO     | ..............................
[2025-07-24 22:03:19] 2025-07-25 02:02:44,937 | INFO     | 
[2025-07-24 22:03:19] 2025-07-25 02:02:44,937 | INFO     | job summary report
[2025-07-24 22:03:19] 2025-07-25 02:02:44,937 | INFO     | --------------------------------------------------
[2025-07-24 22:03:19] 2025-07-25 02:02:44,937 | INFO     | PanDA job id: 6744925860
[2025-07-24 22:03:19] 2025-07-25 02:02:44,937 | INFO     | task id: 45743349
[2025-07-24 22:03:19] 2025-07-25 02:02:44,937 | INFO     | errors: (none)
[2025-07-24 22:03:19] 2025-07-25 02:02:44,937 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | pilot state: finished 
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | transexitcode: 0
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | exeerrorcode: 0
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | exeerrordiag: 
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | exitcode: 0
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | exitmsg: OK
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | cpuconsumptiontime: 36836 s
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | nevents: 400
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | neventsw: 0
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | pid: 558776
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | pgrp: 558776
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | corecount: 8
[2025-07-24 22:03:19] 2025-07-25 02:02:44,938 | INFO     | event service: False
[2025-07-24 22:03:19] 2025-07-25 02:02:44,939 | INFO     | sizes: {0: 2396641, 1: 2397497, 2: 2397497, 12: 2397525, 15: 2397815, 23: 2397843, 8512: 2425932, 8513: 2425931, 8515: 2434985, 8518: 2435041, 8540: 2435235}
[2025-07-24 22:03:19] 2025-07-25 02:02:44,939 | INFO     | --------------------------------------------------
[2025-07-24 22:03:19] 2025-07-25 02:02:44,939 | INFO     | 
[2025-07-24 22:03:19] 2025-07-25 02:02:44,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-24 22:03:19] 2025-07-25 02:02:45,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,113 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,113 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 22:03:19] 2025-07-25 02:02:45,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 22:03:19] 2025-07-25 02:02:45,115 | INFO     | job 6744925860 has completed (purged errors)
[2025-07-24 22:03:19] 2025-07-25 02:02:45,115 | INFO     | overall cleanup function is called
[2025-07-24 22:03:19] 2025-07-25 02:02:46,130 | INFO     | --- collectZombieJob: --- 10, [558776]
[2025-07-24 22:03:19] 2025-07-25 02:02:46,130 | INFO     | zombie collector waiting for pid 558776
[2025-07-24 22:03:19] 2025-07-25 02:02:46,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 22:03:19] 2025-07-25 02:02:46,130 | INFO     | collected zombie processes
[2025-07-24 22:03:19] 2025-07-25 02:02:46,130 | INFO     | will attempt to kill all subprocesses of pid=558776
[2025-07-24 22:03:19] 2025-07-25 02:02:47,466 | INFO     | process IDs to be killed: [558776] (in reverse order)
[2025-07-24 22:03:19] 2025-07-25 02:02:47,774 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 22:03:19] 2025-07-25 02:02:47,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 22:03:19] 2025-07-25 02:02:47,851 | INFO     | did not find any defunct processes belonging to 558776
[2025-07-24 22:03:19] 2025-07-25 02:02:47,871 | INFO     | did not find any defunct processes belonging to 558776
[2025-07-24 22:03:19] 2025-07-25 02:02:47,872 | INFO     | ready for new job
[2025-07-24 22:03:19] 2025-07-25 02:02:47,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 22:03:19] 2025-07-25 02:02:47,874 | INFO     | ***************************************
[2025-07-24 22:03:19] 2025-07-25 02:02:47,874 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 22:03:19] 2025-07-25 02:02:47,874 | INFO     | ***************************************
[2025-07-24 22:03:19] 2025-07-25 02:02:47,874 | INFO     | 
[2025-07-24 22:03:19] 2025-07-25 02:02:47,897 | INFO     | architecture information:
[2025-07-24 22:03:19] 2025-07-25 02:02:47,902 | INFO     | executing command: cat /etc/os-release
[2025-07-24 22:03:19] 2025-07-25 02:02:48,024 | INFO     | cat /etc/os-release:
[2025-07-24 22:03:19] NAME="CentOS Linux"
[2025-07-24 22:03:19] VERSION="7 (Core)"
[2025-07-24 22:03:19] ID="centos"
[2025-07-24 22:03:19] ID_LIKE="rhel fedora"
[2025-07-24 22:03:19] VERSION_ID="7"
[2025-07-24 22:03:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 22:03:19] ANSI_COLOR="0;31"
[2025-07-24 22:03:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 22:03:19] HOME_URL="https://www.centos.org/"
[2025-07-24 22:03:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 22:03:19] 
[2025-07-24 22:03:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 22:03:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 22:03:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 22:03:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 22:03:19] 
[2025-07-24 22:03:19] 2025-07-25 02:02:48,024 | INFO     | ***************************************
[2025-07-24 22:03:19] 2025-07-25 02:02:48,530 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-24 22:03:19] 2025-07-25 02:02:48,649 | INFO     | sufficient remaining disk space (75800510464 B)
[2025-07-24 22:03:19] 2025-07-25 02:02:48,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 22:03:19] 2025-07-25 02:02:48,650 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 22:03:19] 2025-07-25 02:02:48,650 | INFO     | update_server=False
[2025-07-24 22:03:19] 2025-07-25 02:02:48,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 22:03:19] 2025-07-25 02:02:48,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 22:03:19] 2025-07-25 02:02:48,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 22:03:19] 2025-07-25 02:02:48,765 | INFO     | aborting loop
[2025-07-24 22:03:19] 2025-07-25 02:02:49,384 | INFO     | all payload control threads have been joined
[2025-07-24 22:03:19] 2025-07-25 02:02:49,425 | INFO     | all data control threads have been joined
[2025-07-24 22:03:19] 2025-07-25 02:02:49,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 22:03:19] 2025-07-25 02:02:49,656 | INFO     | [job] retrieve thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:49,699 | INFO     | all job control threads have been joined
[2025-07-24 22:03:19] 2025-07-25 02:02:49,751 | INFO     | [payload] failed_post thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:49,771 | INFO     | [job] job monitor thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:49,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:49,940 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,001 | INFO     | [job] validate thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,102 | INFO     | [data] copytool_in thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,390 | INFO     | [payload] control thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,441 | INFO     | [data] control thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,592 | INFO     | [job] queue monitor thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,658 | INFO     | [data] copytool_out thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,685 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:50,707 | INFO     | [job] control thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:51,009 | INFO     | [payload] validate_post thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:51,063 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:51,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 22:03:19] 2025-07-25 02:02:55,450 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 22:03:19] 2025-07-25 02:02:57,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472446646080)>', '<ExcThread(monitor, started 140471720466176)>']
[2025-07-24 22:03:19] 2025-07-25 02:03:02,119 | INFO     | all workflow threads have been joined
[2025-07-24 22:03:19] 2025-07-25 02:03:02,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 22:03:19] 2025-07-25 02:03:02,119 | INFO     | traces error code: 0
[2025-07-24 22:03:19] 2025-07-25 02:03:02,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 22:03:19] 2025-07-25 02:03:18,148 | INFO     | PID=551355 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 22:03:19] 2025-07-25 02:03:18,148 | INFO     | .. there are 28 such processes running
[2025-07-24 22:03:19] 2025-07-25 02:03:18,149 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 22:03:19] 2025-07-25 02:03:18,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 22:03:19] 2025-07-25 02:03:18,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 22:03:19] 2025-07-25 02:03:18,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 22:03:19] 2025-07-25 02:03:18,150 | INFO     | [monitor] control thread has ended
[2025-07-24 22:03:19] 2025-07-25 02:03:18,575 [wrapper] ==== pilot stdout END ====
[2025-07-24 22:03:19] 2025-07-25 02:03:18,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 22:03:19] 2025-07-25 02:03:18,587 [wrapper] pilotpid: 551355
[2025-07-24 22:03:19] 2025-07-25 02:03:18,590 [wrapper] Pilot exit status: 0
[2025-07-24 22:03:19] 2025-07-25 02:03:18,675 [wrapper] pandaids: 6744925860
[2025-07-24 22:03:19] 2025-07-25 02:03:19,126 [wrapper] cleanup supervisor_pilot 1144680 551356
[2025-07-24 22:03:19] 2025-07-25 02:03:19,175 [wrapper] Test setup, not cleaning
[2025-07-24 22:03:19] 2025-07-25 02:03:19,221 [wrapper] apfmon messages muted
[2025-07-24 22:03:19] 2025-07-25 02:03:19,273 [wrapper] ==== wrapper stdout END ====
[2025-07-24 22:03:19] 2025-07-25 02:03:19,298 [wrapper] ==== wrapper stderr END ====
[2025-07-24 22:03:19]  *** Error codes and diagnostics ***
[2025-07-24 22:03:19]     "exeErrorCode": 0,
[2025-07-24 22:03:19]     "exeErrorDiag": "",
[2025-07-24 22:03:19]     "pilotErrorCode": 0,
[2025-07-24 22:03:19]     "pilotErrorDiag": "",
[2025-07-24 22:03:19]  *** Listing of results directory ***
[2025-07-24 22:03:19] total 423384
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 15:13 pilot3.tar.gz
[2025-07-24 22:03:19] -rwx------. 1 boincer umatlas     36292 Jul 24 15:29 runpilot2-wrapper.sh
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 15:29 queuedata.json
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas       100 Jul 24 19:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 22:03:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 19:39 run_atlas
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas       105 Jul 24 19:39 job.xml
[2025-07-24 22:03:19] -rw-r--r--. 2 boincer umatlas 226898035 Jul 24 19:39 EVNT.45743347._000402.pool.root.1
[2025-07-24 22:03:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 19:39 start_atlas.sh
[2025-07-24 22:03:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 19:39 shared
[2025-07-24 22:03:19] -rw-r--r--. 2 boincer umatlas    542873 Jul 24 19:39 input.tar.gz
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas         0 Jul 24 19:39 boinc_lockfile
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas      2560 Jul 24 19:39 pandaJob.out
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas    979709 Jul 24 19:39 agis_schedconf.cvmfs.json
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas   1593052 Jul 24 19:39 agis_ddmendpoints.agis.ALL.json
[2025-07-24 22:03:19] drwx------. 4 boincer umatlas      4096 Jul 24 19:39 pilot3
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas       530 Jul 24 22:01 boinc_task_state.xml
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas 200594248 Jul 24 22:01 HITS.45743349._007678.pool.root.1
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas      1034 Jul 24 22:02 memory_monitor_summary.json
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas    338935 Jul 24 22:02 log.45743349._007678.job.log.tgz.1
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas      7776 Jul 24 22:02 heartbeat.json
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas      6934 Jul 24 22:02 init_data.xml
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas        27 Jul 24 22:03 wrapper_checkpoint.txt
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 22:03 boinc_mmap_file
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas        95 Jul 24 22:03 pilot_heartbeat.json
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas       822 Jul 24 22:03 pilotlog.txt
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas    748239 Jul 24 22:03 log.45743349._007678.job.log.1
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas       357 Jul 24 22:03 output.list
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas       620 Jul 24 22:03 runtime_log
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas   1105920 Jul 24 22:03 result.tar.gz
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas      8655 Jul 24 22:03 runtime_log.err
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas       651 Jul 24 22:03 Gc4MDmsnGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqLNLDmeAJnsn.diag
[2025-07-24 22:03:19] -rw-r--r--. 1 boincer umatlas     21261 Jul 24 22:03 stderr.txt
[2025-07-24 22:03:19] HITS file was successfully produced:
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas 200594248 Jul 24 22:01 shared/HITS.pool.root.1
[2025-07-24 22:03:19]  *** Contents of shared directory: ***
[2025-07-24 22:03:19] total 419116
[2025-07-24 22:03:19] -rw-r--r--. 2 boincer umatlas 226898035 Jul 24 19:39 ATLAS.root_0
[2025-07-24 22:03:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 19:39 start_atlas.sh
[2025-07-24 22:03:19] -rw-r--r--. 2 boincer umatlas    542873 Jul 24 19:39 input.tar.gz
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas 200594248 Jul 24 22:01 HITS.pool.root.1
[2025-07-24 22:03:19] -rw-------. 1 boincer umatlas   1105920 Jul 24 22:03 result.tar.gz
22:03:20 (547689): run_atlas exited; CPU time 37125.129508
22:03:20 (547689): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN