Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:24 (2492628): wrapper (7.7.26015): starting
05:20:24 (2492628): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 05:20:24] Arguments: --nthreads 4
[2025-07-26 05:20:24] Threads: 4
[2025-07-26 05:20:24] Checking for CVMFS
[2025-07-26 05:20:24] No cvmfs_config command found, will try listing directly
[2025-07-26 05:20:24] CVMFS is ok
[2025-07-26 05:20:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 05:20:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 05:20:24] Further information can be found at the LHC@home message board.
[2025-07-26 05:20:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 05:20:24] Checking for apptainer binary...
[2025-07-26 05:20:24] which: no apptainer in ((null))
[2025-07-26 05:20:24] apptainer is not installed, using version from CVMFS
[2025-07-26 05:20:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 05:20:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-07-26 05:20:24] apptainer works
[2025-07-26 05:20:24] Set ATHENA_PROC_NUMBER=4
[2025-07-26 05:20:24] Set ATHENA_CORE_NUMBER=4
[2025-07-26 05:20:24] Starting ATLAS job with PandaID=6744925502
[2025-07-26 05:20:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:51:16 (2853143): wrapper (7.7.26015): starting
07:51:16 (2853143): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 07:51:16] Arguments: --nthreads 4
[2025-07-26 07:51:16] Threads: 4
[2025-07-26 07:51:16] This job has been restarted, cleaning up previous attempt
[2025-07-26 07:51:16] Checking for CVMFS
[2025-07-26 07:51:16] No cvmfs_config command found, will try listing directly
[2025-07-26 07:51:16] CVMFS is ok
[2025-07-26 07:51:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 07:51:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 07:51:16] Further information can be found at the LHC@home message board.
[2025-07-26 07:51:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 07:51:16] Checking for apptainer binary...
[2025-07-26 07:51:16] which: no apptainer in ((null))
[2025-07-26 07:51:16] apptainer is not installed, using version from CVMFS
[2025-07-26 07:51:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 07:51:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-07-26 07:51:16] apptainer works
[2025-07-26 07:51:16] Set ATHENA_PROC_NUMBER=4
[2025-07-26 07:51:16] Set ATHENA_CORE_NUMBER=4
[2025-07-26 07:51:16] Starting ATLAS job with PandaID=6744925502
[2025-07-26 07:51:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 11:20:25]  *** The last 200 lines of the pilot log: ***
[2025-07-26 11:20:25] 2025-07-26 09:19:52,606 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 11:20:25] 2025-07-26 09:19:52,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 11:20:25] 2025-07-26 09:19:52,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 11:20:25] 2025-07-26 09:19:52,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 11:20:25] 2025-07-26 09:19:52,611 | INFO     | fitting pss+swap vs Time
[2025-07-26 11:20:25] 2025-07-26 09:19:52,612 | INFO     | sum of square deviations: 2671343110.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,613 | INFO     | sum of deviations: 22868569380.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,613 | INFO     | mean x: 1753515336.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,613 | INFO     | mean y: 2300416.204878049
[2025-07-26 11:20:25] 2025-07-26 09:19:52,613 | INFO     | -- intersect: -15009019908.053288
[2025-07-26 11:20:25] 2025-07-26 09:19:52,613 | INFO     | intersect: -15009019908.053288
[2025-07-26 11:20:25] 2025-07-26 09:19:52,614 | INFO     | chi2: 2.1427778586465367
[2025-07-26 11:20:25] 2025-07-26 09:19:52,614 | INFO     | sum of square deviations: 2480604650.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,616 | INFO     | sum of deviations: 34004666275.499996
[2025-07-26 11:20:25] 2025-07-26 09:19:52,616 | INFO     | mean x: 1753515183.5
[2025-07-26 11:20:25] 2025-07-26 09:19:52,616 | INFO     | mean y: 2309129.895
[2025-07-26 11:20:25] 2025-07-26 09:19:52,616 | INFO     | -- intersect: -24035257123.937363
[2025-07-26 11:20:25] 2025-07-26 09:19:52,616 | INFO     | intersect: -24035257123.937363
[2025-07-26 11:20:25] 2025-07-26 09:19:52,616 | INFO     | chi2: 1.4493576711660352
[2025-07-26 11:20:25] 2025-07-26 09:19:52,616 | INFO     | current chi2=1.4493576711660352 (change=32.36080607620676 %)
[2025-07-26 11:20:25] 2025-07-26 09:19:52,617 | INFO     | sum of square deviations: 2299168690.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,618 | INFO     | sum of deviations: 32922002255.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,618 | INFO     | mean x: 1753515031.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,618 | INFO     | mean y: 2308219.6256410256
[2025-07-26 11:20:25] 2025-07-26 09:19:52,618 | INFO     | -- intersect: -25106430454.420235
[2025-07-26 11:20:25] 2025-07-26 09:19:52,618 | INFO     | intersect: -25106430454.420235
[2025-07-26 11:20:25] 2025-07-26 09:19:52,619 | INFO     | chi2: 1.4500369279440197
[2025-07-26 11:20:25] 2025-07-26 09:19:52,619 | INFO     | current chi2=1.4500369279440197 (change=-0.04686605601211276 %)
[2025-07-26 11:20:25] 2025-07-26 09:19:52,619 | INFO     | right removable region: 194
[2025-07-26 11:20:25] 2025-07-26 09:19:52,619 | INFO     | sum of square deviations: 2480604650.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,621 | INFO     | sum of deviations: -6002973217.000001
[2025-07-26 11:20:25] 2025-07-26 09:19:52,621 | INFO     | mean x: 1753515488.5
[2025-07-26 11:20:25] 2025-07-26 09:19:52,621 | INFO     | mean y: 2323240.04
[2025-07-26 11:20:25] 2025-07-26 09:19:52,621 | INFO     | -- intersect: 4245767076.630475
[2025-07-26 11:20:25] 2025-07-26 09:19:52,621 | INFO     | intersect: 4245767076.630475
[2025-07-26 11:20:25] 2025-07-26 09:19:52,622 | INFO     | chi2: 0.716280555212527
[2025-07-26 11:20:25] 2025-07-26 09:19:52,622 | INFO     | current chi2=0.716280555212527 (change=66.57233729001857 %)
[2025-07-26 11:20:25] 2025-07-26 09:19:52,622 | INFO     | sum of square deviations: 2299168690.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,623 | INFO     | sum of deviations: -6165943440.000002
[2025-07-26 11:20:25] 2025-07-26 09:19:52,623 | INFO     | mean x: 1753515641.0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,624 | INFO     | mean y: 2323360.358974359
[2025-07-26 11:20:25] 2025-07-26 09:19:52,624 | INFO     | -- intersect: 4704926658.0584345
[2025-07-26 11:20:25] 2025-07-26 09:19:52,624 | INFO     | intersect: 4704926658.0584345
[2025-07-26 11:20:25] 2025-07-26 09:19:52,624 | INFO     | chi2: 0.7135147734693519
[2025-07-26 11:20:25] 2025-07-26 09:19:52,624 | INFO     | current chi2=0.7135147734693519 (change=0.3861310659696 %)
[2025-07-26 11:20:25] 2025-07-26 09:19:52,624 | INFO     | left removable region: 20
[2025-07-26 11:20:25] 2025-07-26 09:19:52,625 | INFO     | sum of square deviations: 1633472487.5
[2025-07-26 11:20:25] 2025-07-26 09:19:52,626 | INFO     | sum of deviations: 4931552198.000003
[2025-07-26 11:20:25] 2025-07-26 09:19:52,626 | INFO     | mean x: 1753515610.5
[2025-07-26 11:20:25] 2025-07-26 09:19:52,626 | INFO     | mean y: 2332591.1379310344
[2025-07-26 11:20:25] 2025-07-26 09:19:52,626 | INFO     | -- intersect: -5291637052.895386
[2025-07-26 11:20:25] 2025-07-26 09:19:52,626 | INFO     | intersect: -5291637052.895386
[2025-07-26 11:20:25] 2025-07-26 09:19:52,626 | INFO     | chi2: 0.000214933375715457
[2025-07-26 11:20:25] 2025-07-26 09:19:52,627 | INFO     | -- intersect: -5291637052.895386
[2025-07-26 11:20:25] 2025-07-26 09:19:52,627 | INFO     | current memory leak: 3.02 B/s (using 174 data points, chi2=0.00)
[2025-07-26 11:20:25] 2025-07-26 09:19:52,627 | INFO     | could have reported an average CPU frequency of 2540 MHz (10 samples)
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | ..............................
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . Timing measurements:
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . get job = 0 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . initial setup = 1 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . payload setup = 7 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . stage-in = 0 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . payload execution = 12469 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . stage-out = 1 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | . log creation = 0 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,628 | INFO     | ..............................
[2025-07-26 11:20:25] 2025-07-26 09:19:52,990 | INFO     | 
[2025-07-26 11:20:25] 2025-07-26 09:19:52,990 | INFO     | job summary report
[2025-07-26 11:20:25] 2025-07-26 09:19:52,990 | INFO     | --------------------------------------------------
[2025-07-26 11:20:25] 2025-07-26 09:19:52,990 | INFO     | PanDA job id: 6744925502
[2025-07-26 11:20:25] 2025-07-26 09:19:52,990 | INFO     | task id: 45743349
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | errors: (none)
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | pilot state: finished 
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | transexitcode: 0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | exeerrorcode: 0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | exeerrordiag: 
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | exitcode: 0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | exitmsg: OK
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | cpuconsumptiontime: 48336 s
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | nevents: 400
[2025-07-26 11:20:25] 2025-07-26 09:19:52,991 | INFO     | neventsw: 0
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | pid: 2863760
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | pgrp: 2863760
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | corecount: 4
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | event service: False
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | sizes: {0: 2397480, 1: 2397480, 5: 2397770, 11: 2397826, 12480: 2427771, 12481: 2427770, 12482: 2436974, 12485: 2437030, 12491: 2437224}
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | --------------------------------------------------
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | 
[2025-07-26 11:20:25] 2025-07-26 09:19:52,992 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-07-26 11:20:25] 2025-07-26 09:19:53,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 11:20:25] 2025-07-26 09:19:53,017 | INFO     | job 6744925502 has completed (purged errors)
[2025-07-26 11:20:25] 2025-07-26 09:19:53,018 | INFO     | overall cleanup function is called
[2025-07-26 11:20:25] 2025-07-26 09:19:54,026 | INFO     | --- collectZombieJob: --- 10, [2863760]
[2025-07-26 11:20:25] 2025-07-26 09:19:54,026 | INFO     | zombie collector waiting for pid 2863760
[2025-07-26 11:20:25] 2025-07-26 09:19:54,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 11:20:25] 2025-07-26 09:19:54,026 | INFO     | collected zombie processes
[2025-07-26 11:20:25] 2025-07-26 09:19:54,026 | INFO     | will attempt to kill all subprocesses of pid=2863760
[2025-07-26 11:20:25] 2025-07-26 09:19:54,373 | INFO     | process IDs to be killed: [2863760] (in reverse order)
[2025-07-26 11:20:25] 2025-07-26 09:19:54,489 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 11:20:25] 2025-07-26 09:19:54,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 11:20:25] 2025-07-26 09:19:54,500 | INFO     | did not find any defunct processes belonging to 2863760
[2025-07-26 11:20:25] 2025-07-26 09:19:54,511 | INFO     | did not find any defunct processes belonging to 2863760
[2025-07-26 11:20:25] 2025-07-26 09:19:54,511 | INFO     | ready for new job
[2025-07-26 11:20:25] 2025-07-26 09:19:54,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 11:20:25] 2025-07-26 09:19:54,514 | INFO     | ***************************************
[2025-07-26 11:20:25] 2025-07-26 09:19:54,514 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 11:20:25] 2025-07-26 09:19:54,515 | INFO     | ***************************************
[2025-07-26 11:20:25] 2025-07-26 09:19:54,515 | INFO     | 
[2025-07-26 11:20:25] 2025-07-26 09:19:54,518 | INFO     | architecture information:
[2025-07-26 11:20:25] 2025-07-26 09:19:54,519 | INFO     | executing command: cat /etc/os-release
[2025-07-26 11:20:25] 2025-07-26 09:19:54,535 | INFO     | cat /etc/os-release:
[2025-07-26 11:20:25] NAME="CentOS Linux"
[2025-07-26 11:20:25] VERSION="7 (Core)"
[2025-07-26 11:20:25] ID="centos"
[2025-07-26 11:20:25] ID_LIKE="rhel fedora"
[2025-07-26 11:20:25] VERSION_ID="7"
[2025-07-26 11:20:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 11:20:25] ANSI_COLOR="0;31"
[2025-07-26 11:20:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 11:20:25] HOME_URL="https://www.centos.org/"
[2025-07-26 11:20:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 11:20:25] 
[2025-07-26 11:20:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 11:20:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 11:20:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 11:20:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 11:20:25] 
[2025-07-26 11:20:25] 2025-07-26 09:19:54,536 | INFO     | ***************************************
[2025-07-26 11:20:25] 2025-07-26 09:19:55,038 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-07-26 11:20:25] 2025-07-26 09:19:55,055 | INFO     | sufficient remaining disk space (654979366912 B)
[2025-07-26 11:20:25] 2025-07-26 09:19:55,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 11:20:25] 2025-07-26 09:19:55,056 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 11:20:25] 2025-07-26 09:19:55,056 | INFO     | update_server=False
[2025-07-26 11:20:25] 2025-07-26 09:19:55,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 11:20:25] 2025-07-26 09:19:55,057 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:20:25] 2025-07-26 09:19:55,057 | INFO     | aborting loop
[2025-07-26 11:20:25] 2025-07-26 09:19:55,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 11:20:25] 2025-07-26 09:19:55,470 | INFO     | all job control threads have been joined
[2025-07-26 11:20:25] 2025-07-26 09:19:55,538 | INFO     | all payload control threads have been joined
[2025-07-26 11:20:25] 2025-07-26 09:19:56,034 | INFO     | all data control threads have been joined
[2025-07-26 11:20:25] 2025-07-26 09:19:56,061 | INFO     | [job] retrieve thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:56,062 | INFO     | [job] job monitor thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:56,091 | INFO     | [data] copytool_in thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:56,476 | INFO     | [job] control thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:56,512 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:56,543 | INFO     | [payload] control thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:56,564 | INFO     | [payload] validate_post thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,002 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,039 | INFO     | [data] control thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,062 | INFO     | [data] copytool_out thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,149 | INFO     | [job] validate thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,262 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,359 | INFO     | [payload] failed_post thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:19:57,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 11:20:25] 2025-07-26 09:19:57,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:20:25] 2025-07-26 09:19:58,750 | INFO     | [job] queue monitor thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:20:01,677 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 11:20:25] 2025-07-26 09:20:03,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22560224442176)>', '<ExcThread(monitor, started 22559512844032)>']
[2025-07-26 11:20:25] 2025-07-26 09:20:08,587 | INFO     | all workflow threads have been joined
[2025-07-26 11:20:25] 2025-07-26 09:20:08,587 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 11:20:25] 2025-07-26 09:20:08,588 | INFO     | traces error code: 0
[2025-07-26 11:20:25] 2025-07-26 09:20:08,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 11:20:25] 2025-07-26 09:20:24,679 | INFO     | PID=2856817 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 11:20:25] 2025-07-26 09:20:24,680 | INFO     | .. there are 12 such processes running
[2025-07-26 11:20:25] 2025-07-26 09:20:24,682 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 11:20:25] 2025-07-26 09:20:24,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 11:20:25] 2025-07-26 09:20:24,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 11:20:25] 2025-07-26 09:20:24,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 11:20:25] 2025-07-26 09:20:24,682 | INFO     | [monitor] control thread has ended
[2025-07-26 11:20:25] 2025-07-26 09:20:24,852 [wrapper] ==== pilot stdout END ====
[2025-07-26 11:20:25] 2025-07-26 09:20:24,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 11:20:25] 2025-07-26 09:20:24,859 [wrapper] pilotpid: 2856817
[2025-07-26 11:20:25] 2025-07-26 09:20:24,862 [wrapper] Pilot exit status: 0
[2025-07-26 11:20:25] 2025-07-26 09:20:24,873 [wrapper] pandaids: 6744925502 6744925502
[2025-07-26 11:20:25] 2025-07-26 09:20:24,943 [wrapper] cleanup supervisor_pilot 3209617 2856818
[2025-07-26 11:20:25] 2025-07-26 09:20:24,946 [wrapper] Test setup, not cleaning
[2025-07-26 11:20:25] 2025-07-26 09:20:24,949 [wrapper] apfmon messages muted
[2025-07-26 11:20:25] 2025-07-26 09:20:24,951 [wrapper] ==== wrapper stdout END ====
[2025-07-26 11:20:25] 2025-07-26 09:20:24,954 [wrapper] ==== wrapper stderr END ====
[2025-07-26 11:20:25]  *** Error codes and diagnostics ***
[2025-07-26 11:20:25]     "exeErrorCode": 0,
[2025-07-26 11:20:25]     "exeErrorDiag": "",
[2025-07-26 11:20:25]     "pilotErrorCode": 0,
[2025-07-26 11:20:25]     "pilotErrorDiag": "",
[2025-07-26 11:20:25]  *** Listing of results directory ***
[2025-07-26 11:20:25] total 657200
[2025-07-26 11:20:25] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc    530466 Jul 24 21:13 pilot3.tar.gz
[2025-07-26 11:20:25] -rwx------ 1 boinc boinc     36292 Jul 24 21:19 runpilot2-wrapper.sh
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc      5112 Jul 24 21:19 queuedata.json
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc       100 Jul 26 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 11:20:25] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 05:20 run_atlas
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc       105 Jul 26 05:20 job.xml
[2025-07-26 11:20:25] -rw-r--r-- 3 boinc boinc 232773975 Jul 26 05:20 EVNT.45743347._000388.pool.root.1
[2025-07-26 11:20:25] -rw-r--r-- 3 boinc boinc 232773975 Jul 26 05:20 ATLAS.root_0
[2025-07-26 11:20:25] -rw-r--r-- 2 boinc boinc     15095 Jul 26 05:20 start_atlas.sh
[2025-07-26 11:20:25] drwxrwx--x 2 boinc boinc      4096 Jul 26 05:20 shared
[2025-07-26 11:20:25] -rw-r--r-- 2 boinc boinc    542878 Jul 26 05:20 input.tar.gz
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc         0 Jul 26 05:20 boinc_lockfile
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc      6641 Jul 26 07:51 init_data.xml
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc      2560 Jul 26 07:51 pandaJob.out
[2025-07-26 11:20:25] -rw------- 1 boinc boinc    980001 Jul 26 07:51 agis_schedconf.cvmfs.json
[2025-07-26 11:20:25] -rw------- 1 boinc boinc 200549712 Jul 26 11:19 HITS.45743349._007328.pool.root.1
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc       531 Jul 26 11:19 boinc_task_state.xml
[2025-07-26 11:20:25] -rw------- 1 boinc boinc      1034 Jul 26 11:19 memory_monitor_summary.json
[2025-07-26 11:20:25] -rw------- 1 boinc boinc   1593052 Jul 26 11:19 agis_ddmendpoints.agis.ALL.json
[2025-07-26 11:20:25] -rw------- 1 boinc boinc    320403 Jul 26 11:19 log.45743349._007328.job.log.tgz.1
[2025-07-26 11:20:25] -rw------- 1 boinc boinc      7824 Jul 26 11:19 heartbeat.json
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc      8192 Jul 26 11:20 boinc_mmap_file
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc        28 Jul 26 11:20 wrapper_checkpoint.txt
[2025-07-26 11:20:25] -rw------- 1 boinc boinc        97 Jul 26 11:20 pilot_heartbeat.json
[2025-07-26 11:20:25] -rw------- 1 boinc boinc       823 Jul 26 11:20 pilotlog.txt
[2025-07-26 11:20:25] -rw------- 1 boinc boinc   1174974 Jul 26 11:20 log.45743349._007328.job.log.1
[2025-07-26 11:20:25] -rw------- 1 boinc boinc       357 Jul 26 11:20 output.list
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc       620 Jul 26 11:20 runtime_log
[2025-07-26 11:20:25] -rw------- 1 boinc boinc   1515520 Jul 26 11:20 result.tar.gz
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc      9104 Jul 26 11:20 runtime_log.err
[2025-07-26 11:20:25] -rw------- 1 boinc boinc       790 Jul 26 11:20 nB6MDmPeGz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrZxKDmSNJM3m.diag
[2025-07-26 11:20:25] -rw-r--r-- 1 boinc boinc     22615 Jul 26 11:20 stderr.txt
[2025-07-26 11:20:25] HITS file was successfully produced:
[2025-07-26 11:20:25] -rw------- 1 boinc boinc 200549712 Jul 26 11:19 shared/HITS.pool.root.1
[2025-07-26 11:20:25]  *** Contents of shared directory: ***
[2025-07-26 11:20:25] total 425208
[2025-07-26 11:20:25] -rw-r--r-- 3 boinc boinc 232773975 Jul 26 05:20 ATLAS.root_0
[2025-07-26 11:20:25] -rw-r--r-- 2 boinc boinc     15095 Jul 26 05:20 start_atlas.sh
[2025-07-26 11:20:25] -rw-r--r-- 2 boinc boinc    542878 Jul 26 05:20 input.tar.gz
[2025-07-26 11:20:25] -rw------- 1 boinc boinc 200549712 Jul 26 11:19 HITS.pool.root.1
[2025-07-26 11:20:25] -rw------- 1 boinc boinc   1515520 Jul 26 11:20 result.tar.gz
11:20:26 (2853143): run_atlas exited; CPU time 48771.406672
11:20:26 (2853143): called boinc_finish(0)

</stderr_txt>
]]>

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