Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:02:45 (1862971): wrapper (7.7.26015): starting
12:02:45 (1862971): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 12:02:45] Arguments: --nthreads 4
[2025-07-27 12:02:45] Threads: 4
[2025-07-27 12:02:45] Checking for CVMFS
[2025-07-27 12:02:45] No cvmfs_config command found, will try listing directly
[2025-07-27 12:02:45] CVMFS is ok
[2025-07-27 12:02:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:02:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:02:45] Further information can be found at the LHC@home message board.
[2025-07-27 12:02:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:02:45] Checking for apptainer binary...
[2025-07-27 12:02:45] which: no apptainer in ((null))
[2025-07-27 12:02:45] apptainer is not installed, using version from CVMFS
[2025-07-27 12:02:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:02:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-07-27 12:02:46] apptainer works
[2025-07-27 12:02:46] Set ATHENA_PROC_NUMBER=4
[2025-07-27 12:02:46] Set ATHENA_CORE_NUMBER=4
[2025-07-27 12:02:46] Starting ATLAS job with PandaID=6744843591
[2025-07-27 12:02:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:54:29 (2007552): wrapper (7.7.26015): starting
13:54:29 (2007552): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 13:54:29] Arguments: --nthreads 4
[2025-07-27 13:54:29] Threads: 4
[2025-07-27 13:54:29] This job has been restarted, cleaning up previous attempt
[2025-07-27 13:54:29] Checking for CVMFS
[2025-07-27 13:54:29] No cvmfs_config command found, will try listing directly
[2025-07-27 13:54:29] CVMFS is ok
[2025-07-27 13:54:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:54:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:54:29] Further information can be found at the LHC@home message board.
[2025-07-27 13:54:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:54:29] Checking for apptainer binary...
[2025-07-27 13:54:29] which: no apptainer in ((null))
[2025-07-27 13:54:29] apptainer is not installed, using version from CVMFS
[2025-07-27 13:54:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:54:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-07-27 13:54:29] apptainer works
[2025-07-27 13:54:29] Set ATHENA_PROC_NUMBER=4
[2025-07-27 13:54:29] Set ATHENA_CORE_NUMBER=4
[2025-07-27 13:54:29] Starting ATLAS job with PandaID=6744843591
[2025-07-27 13:54:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:55:53]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:55:53] 2025-07-27 15:55:20,341 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:55:53] 2025-07-27 15:55:20,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:55:53] 2025-07-27 15:55:20,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:55:53] 2025-07-27 15:55:20,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:55:53] 2025-07-27 15:55:20,347 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:55:53] 2025-07-27 15:55:20,347 | INFO     | sum of square deviations: 4127772278.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,349 | INFO     | sum of deviations: 5207993095.999992
[2025-07-27 17:55:53] 2025-07-27 15:55:20,349 | INFO     | mean x: 1753624504.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,349 | INFO     | mean y: 2330018.658227848
[2025-07-27 17:55:53] 2025-07-27 15:55:20,349 | INFO     | -- intersect: -2210210716.3247333
[2025-07-27 17:55:53] 2025-07-27 15:55:20,350 | INFO     | intersect: -2210210716.3247333
[2025-07-27 17:55:53] 2025-07-27 15:55:20,350 | INFO     | chi2: 2.3172401125774558
[2025-07-27 17:55:53] 2025-07-27 15:55:20,351 | INFO     | sum of square deviations: 3871990738.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,352 | INFO     | sum of deviations: 19833058069.499985
[2025-07-27 17:55:53] 2025-07-27 15:55:20,352 | INFO     | mean x: 1753624351.5
[2025-07-27 17:55:53] 2025-07-27 15:55:20,353 | INFO     | mean y: 2338586.978448276
[2025-07-27 17:55:53] 2025-07-27 15:55:20,353 | INFO     | -- intersect: -8980052112.993507
[2025-07-27 17:55:53] 2025-07-27 15:55:20,353 | INFO     | intersect: -8980052112.993507
[2025-07-27 17:55:53] 2025-07-27 15:55:20,353 | INFO     | chi2: 1.5335346024964625
[2025-07-27 17:55:53] 2025-07-27 15:55:20,354 | INFO     | current chi2=1.5335346024964625 (change=33.820643179237955 %)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,354 | INFO     | sum of square deviations: 3627000098.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,356 | INFO     | sum of deviations: 19394362813.999996
[2025-07-27 17:55:53] 2025-07-27 15:55:20,356 | INFO     | mean x: 1753624199.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,356 | INFO     | mean y: 2338313.8634361234
[2025-07-27 17:55:53] 2025-07-27 15:55:20,356 | INFO     | -- intersect: -9374673827.263926
[2025-07-27 17:55:53] 2025-07-27 15:55:20,356 | INFO     | intersect: -9374673827.263926
[2025-07-27 17:55:53] 2025-07-27 15:55:20,357 | INFO     | chi2: 1.5343400808439176
[2025-07-27 17:55:53] 2025-07-27 15:55:20,357 | INFO     | current chi2=1.5343400808439176 (change=-0.05252430210207822 %)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,357 | INFO     | right removable region: 226
[2025-07-27 17:55:53] 2025-07-27 15:55:20,357 | INFO     | sum of square deviations: 3871990738.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,359 | INFO     | sum of deviations: -27831146666.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,359 | INFO     | mean x: 1753624656.5
[2025-07-27 17:55:53] 2025-07-27 15:55:20,359 | INFO     | mean y: 2349518.8189655175
[2025-07-27 17:55:53] 2025-07-27 15:55:20,359 | INFO     | -- intersect: 12607076212.29624
[2025-07-27 17:55:53] 2025-07-27 15:55:20,360 | INFO     | intersect: 12607076212.29624
[2025-07-27 17:55:53] 2025-07-27 15:55:20,360 | INFO     | chi2: 0.9137512550813516
[2025-07-27 17:55:53] 2025-07-27 15:55:20,360 | INFO     | current chi2=0.9137512550813516 (change=60.567260590660574 %)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,361 | INFO     | sum of square deviations: 3627000098.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,362 | INFO     | sum of deviations: -17650922485.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,362 | INFO     | mean x: 1753624809.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,363 | INFO     | mean y: 2343165.6740088104
[2025-07-27 17:55:53] 2025-07-27 15:55:20,363 | INFO     | -- intersect: 8536419464.293378
[2025-07-27 17:55:53] 2025-07-27 15:55:20,363 | INFO     | intersect: 8536419464.293378
[2025-07-27 17:55:53] 2025-07-27 15:55:20,363 | INFO     | chi2: 0.8496826807297118
[2025-07-27 17:55:53] 2025-07-27 15:55:20,363 | INFO     | current chi2=0.8496826807297118 (change=7.011599053391808 %)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,364 | INFO     | left removable region: 20
[2025-07-27 17:55:53] 2025-07-27 15:55:20,364 | INFO     | sum of square deviations: 2710627567.5
[2025-07-27 17:55:53] 2025-07-27 15:55:20,365 | INFO     | sum of deviations: 3893409180.0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,366 | INFO     | mean x: 1753624778.5
[2025-07-27 17:55:53] 2025-07-27 15:55:20,366 | INFO     | mean y: 2347417.349514563
[2025-07-27 17:55:53] 2025-07-27 15:55:20,366 | INFO     | -- intersect: -2516471063.1931343
[2025-07-27 17:55:53] 2025-07-27 15:55:20,366 | INFO     | intersect: -2516471063.1931343
[2025-07-27 17:55:53] 2025-07-27 15:55:20,366 | INFO     | chi2: 0.0013886255683763949
[2025-07-27 17:55:53] 2025-07-27 15:55:20,367 | INFO     | -- intersect: -2516471063.1931343
[2025-07-27 17:55:53] 2025-07-27 15:55:20,367 | INFO     | current memory leak: 1.44 B/s (using 206 data points, chi2=0.00)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,367 | INFO     | could have reported an average CPU frequency of 2560 MHz (11 samples)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,368 | INFO     | ..............................
[2025-07-27 17:55:53] 2025-07-27 15:55:20,368 | INFO     | . Timing measurements:
[2025-07-27 17:55:53] 2025-07-27 15:55:20,368 | INFO     | . get job = 0 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,368 | INFO     | . initial setup = 1 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,368 | INFO     | . payload setup = 7 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,368 | INFO     | . stage-in = 0 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,369 | INFO     | . payload execution = 14407 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,369 | INFO     | . stage-out = 1 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,369 | INFO     | . log creation = 0 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,369 | INFO     | ..............................
[2025-07-27 17:55:53] 2025-07-27 15:55:20,640 | INFO     | 
[2025-07-27 17:55:53] 2025-07-27 15:55:20,640 | INFO     | job summary report
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | --------------------------------------------------
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | PanDA job id: 6744843591
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | task id: 45743349
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | errors: (none)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | pilot state: finished 
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | transexitcode: 0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,641 | INFO     | exeerrorcode: 0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | exeerrordiag: 
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | exitcode: 0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | exitmsg: OK
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | cpuconsumptiontime: 55341 s
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | nevents: 400
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | neventsw: 0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | pid: 2018316
[2025-07-27 17:55:53] 2025-07-27 15:55:20,642 | INFO     | pgrp: 2018316
[2025-07-27 17:55:53] 2025-07-27 15:55:20,643 | INFO     | corecount: 4
[2025-07-27 17:55:53] 2025-07-27 15:55:20,643 | INFO     | event service: False
[2025-07-27 17:55:53] 2025-07-27 15:55:20,643 | INFO     | sizes: {0: 2397480, 4: 2397742, 11: 2397770, 14418: 2428492, 14419: 2437512, 14422: 2437568, 14426: 2437890}
[2025-07-27 17:55:53] 2025-07-27 15:55:20,643 | INFO     | --------------------------------------------------
[2025-07-27 17:55:53] 2025-07-27 15:55:20,643 | INFO     | 
[2025-07-27 17:55:53] 2025-07-27 15:55:20,643 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-07-27 17:55:53] 2025-07-27 15:55:20,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,661 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:55:53] 2025-07-27 15:55:20,664 | INFO     | job 6744843591 has completed (purged errors)
[2025-07-27 17:55:53] 2025-07-27 15:55:20,664 | INFO     | overall cleanup function is called
[2025-07-27 17:55:53] 2025-07-27 15:55:21,673 | INFO     | --- collectZombieJob: --- 10, [2018316]
[2025-07-27 17:55:53] 2025-07-27 15:55:21,673 | INFO     | zombie collector waiting for pid 2018316
[2025-07-27 17:55:53] 2025-07-27 15:55:21,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:55:53] 2025-07-27 15:55:21,673 | INFO     | collected zombie processes
[2025-07-27 17:55:53] 2025-07-27 15:55:21,673 | INFO     | will attempt to kill all subprocesses of pid=2018316
[2025-07-27 17:55:53] 2025-07-27 15:55:21,947 | INFO     | process IDs to be killed: [2018316] (in reverse order)
[2025-07-27 17:55:53] 2025-07-27 15:55:22,023 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:55:53] 2025-07-27 15:55:22,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:55:53] 2025-07-27 15:55:22,030 | INFO     | did not find any defunct processes belonging to 2018316
[2025-07-27 17:55:53] 2025-07-27 15:55:22,036 | INFO     | did not find any defunct processes belonging to 2018316
[2025-07-27 17:55:53] 2025-07-27 15:55:22,037 | INFO     | ready for new job
[2025-07-27 17:55:53] 2025-07-27 15:55:22,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:55:53] 2025-07-27 15:55:22,039 | INFO     | ***************************************
[2025-07-27 17:55:53] 2025-07-27 15:55:22,039 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:55:53] 2025-07-27 15:55:22,039 | INFO     | ***************************************
[2025-07-27 17:55:53] 2025-07-27 15:55:22,039 | INFO     | 
[2025-07-27 17:55:53] 2025-07-27 15:55:22,042 | INFO     | architecture information:
[2025-07-27 17:55:53] 2025-07-27 15:55:22,042 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:55:53] 2025-07-27 15:55:22,054 | INFO     | cat /etc/os-release:
[2025-07-27 17:55:53] NAME="CentOS Linux"
[2025-07-27 17:55:53] VERSION="7 (Core)"
[2025-07-27 17:55:53] ID="centos"
[2025-07-27 17:55:53] ID_LIKE="rhel fedora"
[2025-07-27 17:55:53] VERSION_ID="7"
[2025-07-27 17:55:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:55:53] ANSI_COLOR="0;31"
[2025-07-27 17:55:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:55:53] HOME_URL="https://www.centos.org/"
[2025-07-27 17:55:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:55:53] 
[2025-07-27 17:55:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:55:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:55:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:55:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:55:53] 
[2025-07-27 17:55:53] 2025-07-27 15:55:22,054 | INFO     | ***************************************
[2025-07-27 17:55:53] 2025-07-27 15:55:22,557 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-07-27 17:55:53] 2025-07-27 15:55:22,570 | INFO     | sufficient remaining disk space (1649626054656 B)
[2025-07-27 17:55:53] 2025-07-27 15:55:22,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:55:53] 2025-07-27 15:55:22,571 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:55:53] 2025-07-27 15:55:22,571 | INFO     | update_server=False
[2025-07-27 17:55:53] 2025-07-27 15:55:22,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:55:53] 2025-07-27 15:55:22,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:55:53] 2025-07-27 15:55:22,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:55:53] 2025-07-27 15:55:22,572 | INFO     | aborting loop
[2025-07-27 17:55:53] 2025-07-27 15:55:22,591 | INFO     | all data control threads have been joined
[2025-07-27 17:55:53] 2025-07-27 15:55:22,983 | INFO     | all payload control threads have been joined
[2025-07-27 17:55:53] 2025-07-27 15:55:23,393 | INFO     | all job control threads have been joined
[2025-07-27 17:55:53] 2025-07-27 15:55:23,577 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:23,578 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:23,597 | INFO     | [data] control thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:23,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:23,841 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:23,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:55:53] 2025-07-27 15:55:23,989 | INFO     | [payload] control thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:24,061 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:24,267 | INFO     | [job] validate thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:24,308 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:24,399 | INFO     | [job] control thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:24,635 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:24,745 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:24,770 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:25,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:55:53] 2025-07-27 15:55:25,877 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:26,498 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:26,575 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:55:53] 2025-07-27 15:55:28,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23282839312192)>', '<ExcThread(monitor, started 23282537441024)>']
[2025-07-27 17:55:53] 2025-07-27 15:55:33,119 | INFO     | all workflow threads have been joined
[2025-07-27 17:55:53] 2025-07-27 15:55:33,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:55:53] 2025-07-27 15:55:33,119 | INFO     | traces error code: 0
[2025-07-27 17:55:53] 2025-07-27 15:55:33,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:55:53] 2025-07-27 15:55:52,854 | INFO     | PID=2011231 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:55:53] 2025-07-27 15:55:52,854 | INFO     | .. there are 6 such processes running
[2025-07-27 17:55:53] 2025-07-27 15:55:52,855 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:55:53] 2025-07-27 15:55:52,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:55:53] 2025-07-27 15:55:52,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:55:53] 2025-07-27 15:55:52,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:55:53] 2025-07-27 15:55:52,856 | INFO     | [monitor] control thread has ended
[2025-07-27 17:55:53] 2025-07-27 15:55:52,982 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:55:53] 2025-07-27 15:55:52,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:55:53] 2025-07-27 15:55:52,987 [wrapper] pilotpid: 2011231
[2025-07-27 17:55:53] 2025-07-27 15:55:52,989 [wrapper] Pilot exit status: 0
[2025-07-27 17:55:53] 2025-07-27 15:55:52,998 [wrapper] pandaids: 6744843591 6744843591
[2025-07-27 17:55:53] 2025-07-27 15:55:53,043 [wrapper] cleanup supervisor_pilot 2356906 2011232
[2025-07-27 17:55:53] 2025-07-27 15:55:53,045 [wrapper] Test setup, not cleaning
[2025-07-27 17:55:53] 2025-07-27 15:55:53,048 [wrapper] apfmon messages muted
[2025-07-27 17:55:53] 2025-07-27 15:55:53,050 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:55:53] 2025-07-27 15:55:53,052 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:55:53]  *** Error codes and diagnostics ***
[2025-07-27 17:55:53]     "exeErrorCode": 0,
[2025-07-27 17:55:53]     "exeErrorDiag": "",
[2025-07-27 17:55:53]     "pilotErrorCode": 0,
[2025-07-27 17:55:53]     "pilotErrorDiag": "",
[2025-07-27 17:55:53]  *** Listing of results directory ***
[2025-07-27 17:55:53] total 494584
[2025-07-27 17:55:53] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc    530466 Jul 24 19:03 pilot3.tar.gz
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc      5112 Jul 24 19:17 queuedata.json
[2025-07-27 17:55:53] -rwx------ 1 boinc boinc     36292 Jul 24 19:17 runpilot2-wrapper.sh
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc       100 Jul 27 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:55:53] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 12:02 run_atlas
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc       105 Jul 27 12:02 job.xml
[2025-07-27 17:55:53] -rw-r--r-- 3 boinc boinc 144894838 Jul 27 12:02 EVNT.45743347._000174.pool.root.1
[2025-07-27 17:55:53] -rw-r--r-- 3 boinc boinc 144894838 Jul 27 12:02 ATLAS.root_0
[2025-07-27 17:55:53] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:02 start_atlas.sh
[2025-07-27 17:55:53] drwxrwx--x 2 boinc boinc      4096 Jul 27 12:02 shared
[2025-07-27 17:55:53] -rw-r--r-- 2 boinc boinc    542882 Jul 27 12:02 input.tar.gz
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc         0 Jul 27 12:02 boinc_lockfile
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc      6429 Jul 27 13:54 init_data.xml
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc      2560 Jul 27 13:54 pandaJob.out
[2025-07-27 17:55:53] -rw------- 1 boinc boinc    980109 Jul 27 13:54 agis_schedconf.cvmfs.json
[2025-07-27 17:55:53] -rw------- 1 boinc boinc 209399940 Jul 27 17:54 HITS.45743349._003147.pool.root.1
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc       529 Jul 27 17:55 boinc_task_state.xml
[2025-07-27 17:55:53] -rw------- 1 boinc boinc      1038 Jul 27 17:55 memory_monitor_summary.json
[2025-07-27 17:55:53] -rw------- 1 boinc boinc   1593052 Jul 27 17:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:55:53] -rw------- 1 boinc boinc    334951 Jul 27 17:55 log.45743349._003147.job.log.tgz.1
[2025-07-27 17:55:53] -rw------- 1 boinc boinc      7839 Jul 27 17:55 heartbeat.json
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc      8192 Jul 27 17:55 boinc_mmap_file
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc        27 Jul 27 17:55 wrapper_checkpoint.txt
[2025-07-27 17:55:53] -rw------- 1 boinc boinc        97 Jul 27 17:55 pilot_heartbeat.json
[2025-07-27 17:55:53] -rw------- 1 boinc boinc       822 Jul 27 17:55 pilotlog.txt
[2025-07-27 17:55:53] -rw------- 1 boinc boinc   1360528 Jul 27 17:55 log.45743349._003147.job.log.1
[2025-07-27 17:55:53] -rw------- 1 boinc boinc       357 Jul 27 17:55 output.list
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc       620 Jul 27 17:55 runtime_log
[2025-07-27 17:55:53] -rw------- 1 boinc boinc   1710080 Jul 27 17:55 result.tar.gz
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc      9104 Jul 27 17:55 runtime_log.err
[2025-07-27 17:55:53] -rw------- 1 boinc boinc       791 Jul 27 17:55 czmNDmxkEz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQbMLDmdVkPZm.diag
[2025-07-27 17:55:53] -rw-r--r-- 1 boinc boinc     22601 Jul 27 17:55 stderr.txt
[2025-07-27 17:55:53] HITS file was successfully produced:
[2025-07-27 17:55:53] -rw------- 1 boinc boinc 209399940 Jul 27 17:54 shared/HITS.pool.root.1
[2025-07-27 17:55:53]  *** Contents of shared directory: ***
[2025-07-27 17:55:53] total 348220
[2025-07-27 17:55:53] -rw-r--r-- 3 boinc boinc 144894838 Jul 27 12:02 ATLAS.root_0
[2025-07-27 17:55:53] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:02 start_atlas.sh
[2025-07-27 17:55:53] -rw-r--r-- 2 boinc boinc    542882 Jul 27 12:02 input.tar.gz
[2025-07-27 17:55:53] -rw------- 1 boinc boinc 209399940 Jul 27 17:54 HITS.pool.root.1
[2025-07-27 17:55:53] -rw------- 1 boinc boinc   1710080 Jul 27 17:55 result.tar.gz
17:55:54 (2007552): run_atlas exited; CPU time 55880.737379
17:55:54 (2007552): called boinc_finish(0)

</stderr_txt>
]]>

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