Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:20:05 (2769017): wrapper (7.7.26015): starting
13:20:05 (2769017): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 13:20:05] Arguments: --nthreads 12
[2025-07-29 13:20:05] Threads: 12
[2025-07-29 13:20:05] Checking for CVMFS
[2025-07-29 13:20:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 13:20:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 13:20:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 13:20:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 13:20:06] 2.13.0.0 2216046 1053 50420 148888 2 133 3805776 4096000 912 130560 0 1500207 99.993 40015 98 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 13:20:06] CVMFS is ok
[2025-07-29 13:20:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 13:20:06] Checking for apptainer binary...
[2025-07-29 13:20:06] apptainer is not installed, using version from CVMFS
[2025-07-29 13:20:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 13:20:06] dualxeon2
[2025-07-29 13:20:06] apptainer works
[2025-07-29 13:20:06] Set ATHENA_PROC_NUMBER=12
[2025-07-29 13:20:06] Set ATHENA_CORE_NUMBER=12
[2025-07-29 13:20:06] Starting ATLAS job with PandaID=6744930149
[2025-07-29 13:20:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 15:03:16]  *** The last 200 lines of the pilot log: ***
[2025-07-29 15:03:16] 2025-07-29 15:02:57,147 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 15:03:16] 2025-07-29 15:02:57,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 15:03:16] 2025-07-29 15:02:57,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 15:03:16] 2025-07-29 15:02:57,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 15:03:16] 2025-07-29 15:02:57,149 | INFO     | fitting pss+swap vs Time
[2025-07-29 15:03:16] 2025-07-29 15:02:57,149 | INFO     | sum of square deviations: 319447850.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,150 | INFO     | sum of deviations: -3532024012.9999967
[2025-07-29 15:03:16] 2025-07-29 15:02:57,150 | INFO     | mean x: 1753798298.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,150 | INFO     | mean y: 2728150.6435643565
[2025-07-29 15:03:16] 2025-07-29 15:02:57,150 | INFO     | -- intersect: 19393867275.52584
[2025-07-29 15:03:16] 2025-07-29 15:02:57,150 | INFO     | intersect: 19393867275.52584
[2025-07-29 15:03:16] 2025-07-29 15:02:57,150 | INFO     | chi2: 2.605122479685245
[2025-07-29 15:03:16] 2025-07-29 15:02:57,150 | INFO     | sum of square deviations: 274312120.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,151 | INFO     | sum of deviations: 4474062232.5000105
[2025-07-29 15:03:16] 2025-07-29 15:02:57,151 | INFO     | mean x: 1753798145.5
[2025-07-29 15:03:16] 2025-07-29 15:02:57,151 | INFO     | mean y: 2754207.1354166665
[2025-07-29 15:03:16] 2025-07-29 15:02:57,151 | INFO     | -- intersect: -28601895292.89436
[2025-07-29 15:03:16] 2025-07-29 15:02:57,151 | INFO     | intersect: -28601895292.89436
[2025-07-29 15:03:16] 2025-07-29 15:02:57,151 | INFO     | chi2: 1.823501963709349
[2025-07-29 15:03:16] 2025-07-29 15:02:57,151 | INFO     | current chi2=1.823501963709349 (change=30.003215667246963 %)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | sum of square deviations: 233641590.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | sum of deviations: 5220759603.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | mean x: 1753797993.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | mean y: 2757009.5824175826
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | -- intersect: -39186146445.82069
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | intersect: -39186146445.82069
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | chi2: 1.8271448751551758
[2025-07-29 15:03:16] 2025-07-29 15:02:57,152 | INFO     | current chi2=1.8271448751551758 (change=-0.19977557021196524 %)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,153 | INFO     | right removable region: 90
[2025-07-29 15:03:16] 2025-07-29 15:02:57,153 | INFO     | sum of square deviations: 274312120.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,154 | INFO     | sum of deviations: -21979820455.5
[2025-07-29 15:03:16] 2025-07-29 15:02:57,154 | INFO     | mean x: 1753798450.5
[2025-07-29 15:03:16] 2025-07-29 15:02:57,154 | INFO     | mean y: 2789309.96875
[2025-07-29 15:03:16] 2025-07-29 15:02:57,154 | INFO     | -- intersect: 140529482250.5654
[2025-07-29 15:03:16] 2025-07-29 15:02:57,154 | INFO     | intersect: 140529482250.5654
[2025-07-29 15:03:16] 2025-07-29 15:02:57,155 | INFO     | chi2: 0.9634078852241412
[2025-07-29 15:03:16] 2025-07-29 15:02:57,155 | INFO     | current chi2=0.9634078852241412 (change=63.01871053139345 %)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,155 | INFO     | sum of square deviations: 233641590.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,156 | INFO     | sum of deviations: -23162520266.999996
[2025-07-29 15:03:16] 2025-07-29 15:02:57,156 | INFO     | mean x: 1753798603.0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,156 | INFO     | mean y: 2793420.2967032967
[2025-07-29 15:03:16] 2025-07-29 15:02:57,156 | INFO     | -- intersect: 173869080181.24442
[2025-07-29 15:03:16] 2025-07-29 15:02:57,156 | INFO     | intersect: 173869080181.24442
[2025-07-29 15:03:16] 2025-07-29 15:02:57,157 | INFO     | chi2: 0.8919481362224488
[2025-07-29 15:03:16] 2025-07-29 15:02:57,157 | INFO     | current chi2=0.8919481362224488 (change=7.417392996017148 %)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,157 | INFO     | left removable region: 20
[2025-07-29 15:03:16] 2025-07-29 15:02:57,157 | INFO     | sum of square deviations: 106336877.5
[2025-07-29 15:03:16] 2025-07-29 15:02:57,158 | INFO     | sum of deviations: -10018099082.5
[2025-07-29 15:03:16] 2025-07-29 15:02:57,158 | INFO     | mean x: 1753798572.5
[2025-07-29 15:03:16] 2025-07-29 15:02:57,158 | INFO     | mean y: 2817501.9
[2025-07-29 15:03:16] 2025-07-29 15:02:57,158 | INFO     | -- intersect: 165229860867.4724
[2025-07-29 15:03:16] 2025-07-29 15:02:57,158 | INFO     | intersect: 165229860867.4724
[2025-07-29 15:03:16] 2025-07-29 15:02:57,159 | INFO     | chi2: 0.04946576772108129
[2025-07-29 15:03:16] 2025-07-29 15:02:57,159 | INFO     | -- intersect: 165229860867.4724
[2025-07-29 15:03:16] 2025-07-29 15:02:57,159 | INFO     | current memory leak: -94.21 B/s (using 70 data points, chi2=0.05)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,160 | INFO     | could have reported an average CPU frequency of 2465 MHz (7 samples)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,160 | INFO     | ..............................
[2025-07-29 15:03:16] 2025-07-29 15:02:57,160 | INFO     | . Timing measurements:
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | . get job = 0 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | . initial setup = 1 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | . payload setup = 8 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | . stage-in = 0 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | . payload execution = 6120 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | . stage-out = 0 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | . log creation = 0 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,161 | INFO     | ..............................
[2025-07-29 15:03:16] 2025-07-29 15:02:57,243 | INFO     | 
[2025-07-29 15:03:16] 2025-07-29 15:02:57,243 | INFO     | job summary report
[2025-07-29 15:03:16] 2025-07-29 15:02:57,243 | INFO     | --------------------------------------------------
[2025-07-29 15:03:16] 2025-07-29 15:02:57,243 | INFO     | PanDA job id: 6744930149
[2025-07-29 15:03:16] 2025-07-29 15:02:57,243 | INFO     | task id: 45743349
[2025-07-29 15:03:16] 2025-07-29 15:02:57,243 | INFO     | errors: (none)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | pilot state: finished 
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | transexitcode: 0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | exeerrorcode: 0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | exeerrordiag: 
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | exitcode: 0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | exitmsg: OK
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | cpuconsumptiontime: 60219 s
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | nevents: 400
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | neventsw: 0
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | pid: 2779473
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | pgrp: 2779473
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | corecount: 12
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | event service: False
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | sizes: {0: 2391924, 5: 2392186, 11: 2392242, 6132: 2418963, 6133: 2428007, 6136: 2428063, 6142: 2428385}
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | --------------------------------------------------
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | 
[2025-07-29 15:03:16] 2025-07-29 15:02:57,244 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/2
[2025-07-29 15:03:16] 2025-07-29 15:02:57,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,271 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,271 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 15:03:16] 2025-07-29 15:02:57,271 | INFO     | job 6744930149 has completed (purged errors)
[2025-07-29 15:03:16] 2025-07-29 15:02:57,271 | INFO     | overall cleanup function is called
[2025-07-29 15:03:16] 2025-07-29 15:02:58,281 | INFO     | --- collectZombieJob: --- 10, [2779473]
[2025-07-29 15:03:16] 2025-07-29 15:02:58,281 | INFO     | zombie collector waiting for pid 2779473
[2025-07-29 15:03:16] 2025-07-29 15:02:58,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 15:03:16] 2025-07-29 15:02:58,282 | INFO     | collected zombie processes
[2025-07-29 15:03:16] 2025-07-29 15:02:58,282 | INFO     | will attempt to kill all subprocesses of pid=2779473
[2025-07-29 15:03:16] 2025-07-29 15:02:58,432 | INFO     | process IDs to be killed: [2779473] (in reverse order)
[2025-07-29 15:03:16] 2025-07-29 15:02:58,490 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 15:03:16] 2025-07-29 15:02:58,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 15:03:16] 2025-07-29 15:02:58,495 | INFO     | did not find any defunct processes belonging to 2779473
[2025-07-29 15:03:16] 2025-07-29 15:02:58,500 | INFO     | did not find any defunct processes belonging to 2779473
[2025-07-29 15:03:16] 2025-07-29 15:02:58,500 | INFO     | ready for new job
[2025-07-29 15:03:16] 2025-07-29 15:02:58,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 15:03:16] 2025-07-29 15:02:58,502 | INFO     | ***************************************
[2025-07-29 15:03:16] 2025-07-29 15:02:58,503 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 15:03:16] 2025-07-29 15:02:58,503 | INFO     | ***************************************
[2025-07-29 15:03:16] 2025-07-29 15:02:58,503 | INFO     | 
[2025-07-29 15:03:16] 2025-07-29 15:02:58,505 | INFO     | architecture information:
[2025-07-29 15:03:16] 2025-07-29 15:02:58,506 | INFO     | executing command: cat /etc/os-release
[2025-07-29 15:03:16] 2025-07-29 15:02:58,522 | INFO     | cat /etc/os-release:
[2025-07-29 15:03:16] NAME="CentOS Linux"
[2025-07-29 15:03:16] VERSION="7 (Core)"
[2025-07-29 15:03:16] ID="centos"
[2025-07-29 15:03:16] ID_LIKE="rhel fedora"
[2025-07-29 15:03:16] VERSION_ID="7"
[2025-07-29 15:03:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 15:03:16] ANSI_COLOR="0;31"
[2025-07-29 15:03:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 15:03:16] HOME_URL="https://www.centos.org/"
[2025-07-29 15:03:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 15:03:16] 
[2025-07-29 15:03:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 15:03:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 15:03:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 15:03:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 15:03:16] 
[2025-07-29 15:03:16] 2025-07-29 15:02:58,522 | INFO     | ***************************************
[2025-07-29 15:03:16] 2025-07-29 15:02:59,025 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/2
[2025-07-29 15:03:16] 2025-07-29 15:02:59,044 | INFO     | sufficient remaining disk space (61873324032 B)
[2025-07-29 15:03:16] 2025-07-29 15:02:59,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 15:03:16] 2025-07-29 15:02:59,045 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 15:03:16] 2025-07-29 15:02:59,045 | INFO     | update_server=False
[2025-07-29 15:03:16] 2025-07-29 15:02:59,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 15:03:16] 2025-07-29 15:02:59,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 15:03:16] 2025-07-29 15:02:59,046 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-29 15:03:16] 2025-07-29 15:02:59,046 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 15:03:16] 2025-07-29 15:02:59,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 15:03:16] 2025-07-29 15:02:59,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 15:03:16] 2025-07-29 15:02:59,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 15:03:16] 2025-07-29 15:02:59,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 15:03:16] 2025-07-29 15:02:59,048 | INFO     | aborting loop
[2025-07-29 15:03:16] 2025-07-29 15:02:59,563 | INFO     | all job control threads have been joined
[2025-07-29 15:03:16] 2025-07-29 15:02:59,975 | INFO     | all payload control threads have been joined
[2025-07-29 15:03:16] 2025-07-29 15:03:00,026 | INFO     | all data control threads have been joined
[2025-07-29 15:03:16] 2025-07-29 15:03:00,051 | INFO     | [job] retrieve thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,053 | INFO     | [job] queue monitor thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,054 | INFO     | [job] job monitor thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,214 | INFO     | [job] validate thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,273 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,569 | INFO     | [job] control thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,643 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,871 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:00,980 | INFO     | [payload] control thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:01,031 | INFO     | [data] control thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:01,050 | INFO     | [data] copytool_out thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:01,180 | INFO     | [payload] validate_post thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:01,380 | INFO     | [data] copytool_in thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:01,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 15:03:16] 2025-07-29 15:03:01,651 | INFO     | [payload] failed_post thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:05,627 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:09,191 | INFO     | job.realtimelogging is not enabled
[2025-07-29 15:03:16] 2025-07-29 15:03:10,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 15:03:16] 2025-07-29 15:03:10,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135762313512768)>', '<ExcThread(monitor, started 135761290585856)>']
[2025-07-29 15:03:16] 2025-07-29 15:03:11,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 15:03:16] 2025-07-29 15:03:11,108 | INFO     | [monitor] control thread has ended
[2025-07-29 15:03:16] 2025-07-29 15:03:15,848 | INFO     | all workflow threads have been joined
[2025-07-29 15:03:16] 2025-07-29 15:03:15,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 15:03:16] 2025-07-29 15:03:15,849 | INFO     | traces error code: 0
[2025-07-29 15:03:16] 2025-07-29 15:03:15,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 15:03:16] 2025-07-29 15:03:16,053 [wrapper] ==== pilot stdout END ====
[2025-07-29 15:03:16] 2025-07-29 15:03:16,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 15:03:16] 2025-07-29 15:03:16,062 [wrapper] pilotpid: 2772776
[2025-07-29 15:03:16] 2025-07-29 15:03:16,066 [wrapper] Pilot exit status: 0
[2025-07-29 15:03:16] 2025-07-29 15:03:16,082 [wrapper] pandaids: 6744930149
[2025-07-29 15:03:16] 2025-07-29 15:03:16,121 [wrapper] cleanup supervisor_pilot 2798859 2772777
[2025-07-29 15:03:16] 2025-07-29 15:03:16,125 [wrapper] Test setup, not cleaning
[2025-07-29 15:03:16] 2025-07-29 15:03:16,130 [wrapper] apfmon messages muted
[2025-07-29 15:03:16] 2025-07-29 15:03:16,136 [wrapper] ==== wrapper stdout END ====
[2025-07-29 15:03:16] 2025-07-29 15:03:16,140 [wrapper] ==== wrapper stderr END ====
[2025-07-29 15:03:16]  *** Error codes and diagnostics ***
[2025-07-29 15:03:16]     "exeErrorCode": 0,
[2025-07-29 15:03:16]     "exeErrorDiag": "",
[2025-07-29 15:03:16]     "pilotErrorCode": 0,
[2025-07-29 15:03:16]     "pilotErrorDiag": "",
[2025-07-29 15:03:16]  *** Listing of results directory ***
[2025-07-29 15:03:16] total 349068
[2025-07-29 15:03:16] -rw-r--r-- 1 boinc boinc    530466 Jul 24 20:13 pilot3.tar.gz
[2025-07-29 15:03:16] -rwx------ 1 boinc boinc     36292 Jul 24 20:19 runpilot2-wrapper.sh
[2025-07-29 15:03:16] -rw-r--r-- 1 boinc boinc      5112 Jul 24 20:19 queuedata.json
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc       100 Jul 29 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 15:03:16] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 13:20 run_atlas
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc       105 Jul 29 13:20 job.xml
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc      6595 Jul 29 13:20 init_data.xml
[2025-07-29 15:03:16] -rw-r--r-- 2 boinc boinc 145749784 Jul 29 13:20 EVNT.45743347._000477.pool.root.1
[2025-07-29 15:03:16] -rw-r--r-- 2 boinc boinc     15095 Jul 29 13:20 start_atlas.sh
[2025-07-29 15:03:16] drwxrwx--x 2 boinc boinc      4096 Jul 29 13:20 shared
[2025-07-29 15:03:16] -rw-r--r-- 2 boinc boinc    542869 Jul 29 13:20 input.tar.gz
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc         0 Jul 29 13:20 boinc_lockfile
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc      2559 Jul 29 13:20 pandaJob.out
[2025-07-29 15:03:16] -rw------- 1 boinc boinc    977316 Jul 29 13:20 agis_schedconf.cvmfs.json
[2025-07-29 15:03:16] -rw------- 1 boinc boinc   1589827 Jul 29 13:20 agis_ddmendpoints.agis.ALL.json
[2025-07-29 15:03:16] drwx------ 4 boinc boinc      4096 Jul 29 13:20 pilot3
[2025-07-29 15:03:16] -rw------- 1 boinc boinc 205866420 Jul 29 15:02 HITS.45743349._008924.pool.root.1
[2025-07-29 15:03:16] -rw------- 1 boinc boinc        95 Jul 29 15:02 pilot_heartbeat.json
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc       529 Jul 29 15:02 boinc_task_state.xml
[2025-07-29 15:03:16] -rw------- 1 boinc boinc      1021 Jul 29 15:02 memory_monitor_summary.json
[2025-07-29 15:03:16] -rw------- 1 boinc boinc    364378 Jul 29 15:02 log.45743349._008924.job.log.tgz.1
[2025-07-29 15:03:16] -rw------- 1 boinc boinc      7772 Jul 29 15:02 heartbeat.json
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 15:03 boinc_mmap_file
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc        27 Jul 29 15:03 wrapper_checkpoint.txt
[2025-07-29 15:03:16] -rw------- 1 boinc boinc      4575 Jul 29 15:03 pilotlog.txt
[2025-07-29 15:03:16] -rw------- 1 boinc boinc    611093 Jul 29 15:03 log.45743349._008924.job.log.1
[2025-07-29 15:03:16] -rw------- 1 boinc boinc       357 Jul 29 15:03 output.list
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc       620 Jul 29 15:03 runtime_log
[2025-07-29 15:03:16] -rw------- 1 boinc boinc    993280 Jul 29 15:03 result.tar.gz
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc      8969 Jul 29 15:03 runtime_log.err
[2025-07-29 15:03:16] -rw------- 1 boinc boinc       653 Jul 29 15:03 8TPLDmFaHz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHZNLDmkpuU4n.diag
[2025-07-29 15:03:16] -rw-rw-r-- 1 boinc boinc     20565 Jul 29 15:03 stderr.txt
[2025-07-29 15:03:16] HITS file was successfully produced:
[2025-07-29 15:03:16] -rw------- 1 boinc boinc 205866420 Jul 29 15:02 shared/HITS.pool.root.1
[2025-07-29 15:03:16]  *** Contents of shared directory: ***
[2025-07-29 15:03:16] total 344908
[2025-07-29 15:03:16] -rw-r--r-- 2 boinc boinc 145749784 Jul 29 13:20 ATLAS.root_0
[2025-07-29 15:03:16] -rw-r--r-- 2 boinc boinc     15095 Jul 29 13:20 start_atlas.sh
[2025-07-29 15:03:16] -rw-r--r-- 2 boinc boinc    542869 Jul 29 13:20 input.tar.gz
[2025-07-29 15:03:16] -rw------- 1 boinc boinc 205866420 Jul 29 15:02 HITS.pool.root.1
[2025-07-29 15:03:16] -rw------- 1 boinc boinc    993280 Jul 29 15:03 result.tar.gz
15:03:17 (2769017): run_atlas exited; CPU time 60277.029895
15:03:17 (2769017): called boinc_finish(0)

</stderr_txt>
]]>

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