Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:44:04 (3382408): wrapper (7.7.26015): starting
17:44:04 (3382408): wrapper: running run_atlas (--nthreads 10)
[2025-07-24 17:44:04] Arguments: --nthreads 10
[2025-07-24 17:44:04] Threads: 10
[2025-07-24 17:44:04] Checking for CVMFS
[2025-07-24 17:44:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 17:44:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 17:44:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 17:44:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 17:44:04] 2.13.0.0 2209255 14618 261504 148716 0 70 31054408 32935936 9332 16776704 0 47877244 99.509 66394737 30411 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 17:44:04] CVMFS is ok
[2025-07-24 17:44:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 17:44:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 17:44:04] Further information can be found at the LHC@home message board.
[2025-07-24 17:44:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 17:44:04] Checking for apptainer binary...
[2025-07-24 17:44:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 17:44:04] Running /usr/bin/apptainer --version
[2025-07-24 17:44:05] apptainer version 1.4.1-1.el9
[2025-07-24 17:44:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 17:44:05] c-5-6.aglt2.org
[2025-07-24 17:44:05] apptainer works
[2025-07-24 17:44:05] Set ATHENA_PROC_NUMBER=10
[2025-07-24 17:44:05] Set ATHENA_CORE_NUMBER=10
[2025-07-24 17:44:05] Starting ATLAS job with PandaID=6744921996
[2025-07-24 17:44:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 23:06:34]  *** The last 200 lines of the pilot log: ***
[2025-07-24 23:06:34] 2025-07-25 03:06:00,152 | INFO     | monitor loop #1108: job 0:6744921996 is in state 'finished'
[2025-07-24 23:06:34] 2025-07-25 03:06:00,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,473 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 23:06:34] 2025-07-25 03:06:00,493 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8405750000006
[2025-07-24 23:06:34] 2025-07-25 03:06:00,501 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744921996/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,502 | INFO     | extracted standard info from prmon json
[2025-07-24 23:06:34] 2025-07-25 03:06:00,502 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 23:06:34] 2025-07-25 03:06:00,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 23:06:34] 2025-07-25 03:06:00,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 23:06:34] 2025-07-25 03:06:00,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 23:06:34] 2025-07-25 03:06:00,510 | INFO     | fitting pss+swap vs Time
[2025-07-24 23:06:34] 2025-07-25 03:06:00,511 | INFO     | sum of square deviations: 9783452461.974644
[2025-07-24 23:06:34] 2025-07-25 03:06:00,515 | INFO     | sum of deviations: -26191280756.37974
[2025-07-24 23:06:34] 2025-07-25 03:06:00,515 | INFO     | mean x: 1753403091.556962
[2025-07-24 23:06:34] 2025-07-25 03:06:00,515 | INFO     | mean y: 2246495.85443038
[2025-07-24 23:06:34] 2025-07-25 03:06:00,515 | INFO     | -- intersect: 4696281942.805799
[2025-07-24 23:06:34] 2025-07-25 03:06:00,516 | INFO     | intersect: 4696281942.805799
[2025-07-24 23:06:34] 2025-07-25 03:06:00,516 | INFO     | chi2: 1.9678389133549459
[2025-07-24 23:06:34] 2025-07-25 03:06:00,517 | INFO     | sum of square deviations: 9326410871.299032
[2025-07-24 23:06:34] 2025-07-25 03:06:00,520 | INFO     | sum of deviations: -10178755437.453386
[2025-07-24 23:06:34] 2025-07-25 03:06:00,521 | INFO     | mean x: 1753402939.073955
[2025-07-24 23:06:34] 2025-07-25 03:06:00,521 | INFO     | mean y: 2251824.7588424436
[2025-07-24 23:06:34] 2025-07-25 03:06:00,521 | INFO     | -- intersect: 1915898987.2561858
[2025-07-24 23:06:34] 2025-07-25 03:06:00,521 | INFO     | intersect: 1915898987.2561858
[2025-07-24 23:06:34] 2025-07-25 03:06:00,521 | INFO     | chi2: 1.8438534463196081
[2025-07-24 23:06:34] 2025-07-25 03:06:00,522 | INFO     | current chi2=1.8438534463196081 (change=6.300590266504911 %)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,522 | INFO     | right removable region: 310
[2025-07-24 23:06:34] 2025-07-25 03:06:00,522 | INFO     | sum of square deviations: 9326207131.299032
[2025-07-24 23:06:34] 2025-07-25 03:06:00,525 | INFO     | sum of deviations: -65151726896.03857
[2025-07-24 23:06:34] 2025-07-25 03:06:00,526 | INFO     | mean x: 1753403244.073955
[2025-07-24 23:06:34] 2025-07-25 03:06:00,526 | INFO     | mean y: 2259395.9581993567
[2025-07-24 23:06:34] 2025-07-25 03:06:00,526 | INFO     | -- intersect: 12251317098.435202
[2025-07-24 23:06:34] 2025-07-25 03:06:00,526 | INFO     | intersect: 12251317098.435202
[2025-07-24 23:06:34] 2025-07-25 03:06:00,527 | INFO     | chi2: 0.6932127728562312
[2025-07-24 23:06:34] 2025-07-25 03:06:00,527 | INFO     | current chi2=0.6932127728562312 (change=64.77289029342444 %)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,527 | INFO     | sum of square deviations: 8883483738.457514
[2025-07-24 23:06:34] 2025-07-25 03:06:00,530 | INFO     | sum of deviations: -55524473091.581696
[2025-07-24 23:06:34] 2025-07-25 03:06:00,531 | INFO     | mean x: 1753403396.5816994
[2025-07-24 23:06:34] 2025-07-25 03:06:00,531 | INFO     | mean y: 2256058.0032679737
[2025-07-24 23:06:34] 2025-07-25 03:06:00,531 | INFO     | -- intersect: 10961560152.940811
[2025-07-24 23:06:34] 2025-07-25 03:06:00,531 | INFO     | intersect: 10961560152.940811
[2025-07-24 23:06:34] 2025-07-25 03:06:00,532 | INFO     | chi2: 0.6519196782526766
[2025-07-24 23:06:34] 2025-07-25 03:06:00,532 | INFO     | current chi2=0.6519196782526766 (change=5.956770593452199 %)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,532 | INFO     | left removable region: 20
[2025-07-24 23:06:34] 2025-07-25 03:06:00,533 | INFO     | sum of square deviations: 7561495810.968944
[2025-07-24 23:06:34] 2025-07-25 03:06:00,535 | INFO     | sum of deviations: -4894833034.220691
[2025-07-24 23:06:34] 2025-07-25 03:06:00,536 | INFO     | mean x: 1753403518.610345
[2025-07-24 23:06:34] 2025-07-25 03:06:00,536 | INFO     | mean y: 2248884.0068965517
[2025-07-24 23:06:34] 2025-07-25 03:06:00,537 | INFO     | -- intersect: 1137291166.6148555
[2025-07-24 23:06:34] 2025-07-25 03:06:00,537 | INFO     | intersect: 1137291166.6148555
[2025-07-24 23:06:34] 2025-07-25 03:06:00,538 | INFO     | chi2: 0.28866842190929265
[2025-07-24 23:06:34] 2025-07-25 03:06:00,538 | INFO     | -- intersect: 1137291166.6148555
[2025-07-24 23:06:34] 2025-07-25 03:06:00,538 | INFO     | current memory leak: -0.65 B/s (using 290 data points, chi2=0.29)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,539 | INFO     | could have reported an average CPU frequency of 2613 MHz (14 samples)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,540 | INFO     | ..............................
[2025-07-24 23:06:34] 2025-07-25 03:06:00,541 | INFO     | . Timing measurements:
[2025-07-24 23:06:34] 2025-07-25 03:06:00,541 | INFO     | . get job = 0 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,541 | INFO     | . initial setup = 2 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,541 | INFO     | . payload setup = 6 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,541 | INFO     | . stage-in = 0 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,541 | INFO     | . payload execution = 19267 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,542 | INFO     | . stage-out = 2 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,542 | INFO     | . log creation = 0 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,542 | INFO     | ..............................
[2025-07-24 23:06:34] 2025-07-25 03:06:00,700 | INFO     | 
[2025-07-24 23:06:34] 2025-07-25 03:06:00,700 | INFO     | job summary report
[2025-07-24 23:06:34] 2025-07-25 03:06:00,700 | INFO     | --------------------------------------------------
[2025-07-24 23:06:34] 2025-07-25 03:06:00,700 | INFO     | PanDA job id: 6744921996
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | task id: 45743349
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | errors: (none)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | pilot state: finished 
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | transexitcode: 0
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | exeerrorcode: 0
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | exeerrordiag: 
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | exitcode: 0
[2025-07-24 23:06:34] 2025-07-25 03:06:00,701 | INFO     | exitmsg: OK
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | cpuconsumptiontime: 57291 s
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | nevents: 400
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | neventsw: 0
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | pid: 3392437
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | pgrp: 3392437
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | corecount: 10
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | event service: False
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | sizes: {0: 2396641, 1: 2397497, 6: 2397759, 12: 2397787, 19278: 2430760, 19281: 2439758, 19282: 2439942, 19289: 2440136}
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | --------------------------------------------------
[2025-07-24 23:06:34] 2025-07-25 03:06:00,702 | INFO     | 
[2025-07-24 23:06:34] 2025-07-25 03:06:00,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 23:06:34] 2025-07-25 03:06:00,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,727 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 23:06:34] 2025-07-25 03:06:00,727 | INFO     | job 6744921996 has completed (purged errors)
[2025-07-24 23:06:34] 2025-07-25 03:06:00,728 | INFO     | overall cleanup function is called
[2025-07-24 23:06:34] 2025-07-25 03:06:01,159 | INFO     | PID=3385992 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-24 23:06:34] 2025-07-25 03:06:01,160 | INFO     | .. there are 19 such processes running
[2025-07-24 23:06:34] 2025-07-25 03:06:01,746 | INFO     | --- collectZombieJob: --- 10, [3392437]
[2025-07-24 23:06:34] 2025-07-25 03:06:01,746 | INFO     | zombie collector waiting for pid 3392437
[2025-07-24 23:06:34] 2025-07-25 03:06:01,746 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 23:06:34] 2025-07-25 03:06:01,747 | INFO     | collected zombie processes
[2025-07-24 23:06:34] 2025-07-25 03:06:01,747 | INFO     | will attempt to kill all subprocesses of pid=3392437
[2025-07-24 23:06:34] 2025-07-25 03:06:02,157 | INFO     | process IDs to be killed: [3392437] (in reverse order)
[2025-07-24 23:06:34] 2025-07-25 03:06:02,261 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 23:06:34] 2025-07-25 03:06:02,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 23:06:34] 2025-07-25 03:06:02,276 | INFO     | did not find any defunct processes belonging to 3392437
[2025-07-24 23:06:34] 2025-07-25 03:06:02,290 | INFO     | did not find any defunct processes belonging to 3392437
[2025-07-24 23:06:34] 2025-07-25 03:06:02,291 | INFO     | ready for new job
[2025-07-24 23:06:34] 2025-07-25 03:06:02,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 23:06:34] 2025-07-25 03:06:02,294 | INFO     | ***************************************
[2025-07-24 23:06:34] 2025-07-25 03:06:02,294 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 23:06:34] 2025-07-25 03:06:02,294 | INFO     | ***************************************
[2025-07-24 23:06:34] 2025-07-25 03:06:02,294 | INFO     | 
[2025-07-24 23:06:34] 2025-07-25 03:06:02,309 | INFO     | architecture information:
[2025-07-24 23:06:34] 2025-07-25 03:06:02,309 | INFO     | executing command: cat /etc/os-release
[2025-07-24 23:06:34] 2025-07-25 03:06:02,334 | INFO     | cat /etc/os-release:
[2025-07-24 23:06:34] NAME="CentOS Linux"
[2025-07-24 23:06:34] VERSION="7 (Core)"
[2025-07-24 23:06:34] ID="centos"
[2025-07-24 23:06:34] ID_LIKE="rhel fedora"
[2025-07-24 23:06:34] VERSION_ID="7"
[2025-07-24 23:06:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 23:06:34] ANSI_COLOR="0;31"
[2025-07-24 23:06:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 23:06:34] HOME_URL="https://www.centos.org/"
[2025-07-24 23:06:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 23:06:34] 
[2025-07-24 23:06:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 23:06:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 23:06:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 23:06:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 23:06:34] 
[2025-07-24 23:06:34] 2025-07-25 03:06:02,335 | INFO     | ***************************************
[2025-07-24 23:06:34] 2025-07-25 03:06:02,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 23:06:34] 2025-07-25 03:06:02,894 | INFO     | sufficient remaining disk space (76675022848 B)
[2025-07-24 23:06:34] 2025-07-25 03:06:02,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 23:06:34] 2025-07-25 03:06:02,895 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 23:06:34] 2025-07-25 03:06:02,895 | INFO     | update_server=False
[2025-07-24 23:06:34] 2025-07-25 03:06:02,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 23:06:34] 2025-07-25 03:06:02,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 23:06:34] 2025-07-25 03:06:02,976 | INFO     | all payload control threads have been joined
[2025-07-24 23:06:34] 2025-07-25 03:06:03,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 23:06:34] 2025-07-25 03:06:03,670 | INFO     | aborting loop
[2025-07-24 23:06:34] 2025-07-25 03:06:03,805 | INFO     | all data control threads have been joined
[2025-07-24 23:06:34] 2025-07-25 03:06:03,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 23:06:34] 2025-07-25 03:06:03,901 | INFO     | [job] retrieve thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:03,903 | INFO     | [data] copytool_in thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:03,911 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:03,982 | INFO     | [payload] control thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,109 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,251 | INFO     | [payload] failed_post thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,611 | INFO     | all job control threads have been joined
[2025-07-24 23:06:34] 2025-07-25 03:06:04,675 | INFO     | [job] job monitor thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,754 | INFO     | [payload] validate_post thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,810 | INFO     | [data] control thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,883 | INFO     | [job] validate thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:04,904 | INFO     | [data] copytool_out thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:05,218 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:05,618 | INFO     | [job] control thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:05,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 23:06:34] 2025-07-25 03:06:06,679 | INFO     | [job] queue monitor thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:07,865 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 23:06:34] 2025-07-25 03:06:08,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711858399040)>', '<ExcThread(monitor, started 140711223609088)>']
[2025-07-24 23:06:34] 2025-07-25 03:06:13,273 | INFO     | all workflow threads have been joined
[2025-07-24 23:06:34] 2025-07-25 03:06:13,274 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 23:06:34] 2025-07-25 03:06:13,274 | INFO     | traces error code: 0
[2025-07-24 23:06:34] 2025-07-25 03:06:13,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 23:06:34] 2025-07-25 03:06:33,690 | INFO     | PID=3385992 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 23:06:34] 2025-07-25 03:06:33,691 | INFO     | .. there are 19 such processes running
[2025-07-24 23:06:34] 2025-07-25 03:06:33,692 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 23:06:34] 2025-07-25 03:06:33,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 23:06:34] 2025-07-25 03:06:33,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 23:06:34] 2025-07-25 03:06:33,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 23:06:34] 2025-07-25 03:06:33,693 | INFO     | [monitor] control thread has ended
[2025-07-24 23:06:34] 2025-07-25 03:06:33,901 [wrapper] ==== pilot stdout END ====
[2025-07-24 23:06:34] 2025-07-25 03:06:33,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 23:06:34] 2025-07-25 03:06:33,907 [wrapper] pilotpid: 3385992
[2025-07-24 23:06:34] 2025-07-25 03:06:33,910 [wrapper] Pilot exit status: 0
[2025-07-24 23:06:34] 2025-07-25 03:06:33,922 [wrapper] pandaids: 6744921996
[2025-07-24 23:06:34] 2025-07-25 03:06:33,993 [wrapper] cleanup supervisor_pilot  122442 3385993
[2025-07-24 23:06:34] 2025-07-25 03:06:33,996 [wrapper] Test setup, not cleaning
[2025-07-24 23:06:34] 2025-07-25 03:06:34,000 [wrapper] apfmon messages muted
[2025-07-24 23:06:34] 2025-07-25 03:06:34,003 [wrapper] ==== wrapper stdout END ====
[2025-07-24 23:06:34] 2025-07-25 03:06:34,006 [wrapper] ==== wrapper stderr END ====
[2025-07-24 23:06:34]  *** Error codes and diagnostics ***
[2025-07-24 23:06:34]     "exeErrorCode": 0,
[2025-07-24 23:06:34]     "exeErrorDiag": "",
[2025-07-24 23:06:34]     "pilotErrorCode": 0,
[2025-07-24 23:06:34]     "pilotErrorDiag": "",
[2025-07-24 23:06:34]  *** Listing of results directory ***
[2025-07-24 23:06:34] total 346656
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 14:26 pilot3.tar.gz
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 14:39 queuedata.json
[2025-07-24 23:06:34] -rwx------. 1 boincer umatlas     36292 Jul 24 14:40 runpilot2-wrapper.sh
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas       100 Jul 24 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 23:06:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 17:44 run_atlas
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas       105 Jul 24 17:44 job.xml
[2025-07-24 23:06:34] -rw-r--r--. 2 boincer umatlas 148116344 Jul 24 17:44 EVNT.45743347._000327.pool.root.1
[2025-07-24 23:06:34] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 17:44 start_atlas.sh
[2025-07-24 23:06:34] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 17:44 shared
[2025-07-24 23:06:34] -rw-r--r--. 2 boincer umatlas    542880 Jul 24 17:44 input.tar.gz
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas         0 Jul 24 17:44 boinc_lockfile
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas      2560 Jul 24 17:44 pandaJob.out
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas    979701 Jul 24 17:44 agis_schedconf.cvmfs.json
[2025-07-24 23:06:34] drwx------. 4 boincer umatlas      4096 Jul 24 17:44 pilot3
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas      6655 Jul 24 23:02 init_data.xml
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas 199048434 Jul 24 23:05 HITS.45743349._006352.pool.root.1
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas       531 Jul 24 23:05 boinc_task_state.xml
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas      1043 Jul 24 23:05 memory_monitor_summary.json
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas   1593052 Jul 24 23:05 agis_ddmendpoints.agis.ALL.json
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas    456604 Jul 24 23:05 log.45743349._006352.job.log.tgz.1
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas      7815 Jul 24 23:06 heartbeat.json
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas        95 Jul 24 23:06 pilot_heartbeat.json
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas       823 Jul 24 23:06 pilotlog.txt
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 23:06 boinc_mmap_file
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas        28 Jul 24 23:06 wrapper_checkpoint.txt
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas   1512749 Jul 24 23:06 log.45743349._006352.job.log.1
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas       357 Jul 24 23:06 output.list
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas       620 Jul 24 23:06 runtime_log
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas   1986560 Jul 24 23:06 result.tar.gz
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas      8648 Jul 24 23:06 runtime_log.err
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas       654 Jul 24 23:06 hb9KDm42Fz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmITxKDmvRXaGm.diag
[2025-07-24 23:06:34] -rw-r--r--. 1 boincer umatlas     21316 Jul 24 23:06 stderr.txt
[2025-07-24 23:06:34] HITS file was successfully produced:
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas 199048434 Jul 24 23:05 shared/HITS.pool.root.1
[2025-07-24 23:06:34]  *** Contents of shared directory: ***
[2025-07-24 23:06:34] total 341524
[2025-07-24 23:06:34] -rw-r--r--. 2 boincer umatlas 148116344 Jul 24 17:44 ATLAS.root_0
[2025-07-24 23:06:34] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 17:44 start_atlas.sh
[2025-07-24 23:06:34] -rw-r--r--. 2 boincer umatlas    542880 Jul 24 17:44 input.tar.gz
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas 199048434 Jul 24 23:05 HITS.pool.root.1
[2025-07-24 23:06:34] -rw-------. 1 boincer umatlas   1986560 Jul 24 23:06 result.tar.gz
23:06:35 (3382408): run_atlas exited; CPU time 57827.641281
23:06:35 (3382408): called boinc_finish(0)

</stderr_txt>
]]>

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